BolC9t59317H-R-P (polypeptide) Brassica oleracea HDEM
Overview
Homology
BLAST of BolC9t59317H-R vs. GenBank_protein
Match: VDD33994.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 160 bits (404), Expect = 1.920e-49 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 Query: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASYVRDGDGEQHVRYEEGKIDREVEILGDNGPGAEEEEKGGELQDV 77 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASYVRDGDGEQHVRYEEGKIDREVEILGDNGPGAEEEEKGGELQDV Sbjct: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASYVRDGDGEQHVRYEEGKIDREVEILGDNGPGAEEEEKGGELQDV 77
BLAST of BolC9t59317H-R vs. GenBank_protein
Match: KAF3566080.1 (hypothetical protein DY000_02019198 [Brassica cretica]) HSP 1 Score: 79.0 bits (193), Expect = 6.150e-17 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0 Query: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASY 34 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASY Sbjct: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASY 34
BLAST of BolC9t59317H-R vs. GenBank_protein
Match: CAF1786639.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 77.4 bits (189), Expect = 2.490e-16 Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 Query: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASY 34 MEDYGC+RPYGGMQIQPYNGVPGTGDFRSYSASY Sbjct: 1 MEDYGCKRPYGGMQIQPYNGVPGTGDFRSYSASY 34
BLAST of BolC9t59317H-R vs. GenBank_protein
Match: XP_013606802.1 (PREDICTED: uncharacterized protein LOC106313524 [Brassica oleracea var. oleracea] >XP_013720764.1 uncharacterized protein LOC106424545 [Brassica napus]) HSP 1 Score: 75.5 bits (184), Expect = 1.430e-15 Identity = 33/34 (97.06%), Postives = 33/34 (97.06%), Query Frame = 0 Query: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASY 34 MEDYGCQRP GGMQIQPYNGVPGTGDFRSYSASY Sbjct: 1 MEDYGCQRPCGGMQIQPYNGVPGTGDFRSYSASY 34
BLAST of BolC9t59317H-R vs. GenBank_protein
Match: KAF2573615.1 (hypothetical protein F2Q70_00006269 [Brassica cretica]) HSP 1 Score: 77.4 bits (189), Expect = 1.930e-15 Identity = 33/34 (97.06%), Postives = 33/34 (97.06%), Query Frame = 0 Query: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASY 34 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYS SY Sbjct: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSTSY 34
BLAST of BolC9t59317H-R vs. GenBank_protein
Match: XP_013727185.1 (uncharacterized protein BNAA10G20640D isoform X1 [Brassica napus] >XP_013727186.1 uncharacterized protein BNAA10G20640D isoform X2 [Brassica napus] >XP_022549321.1 uncharacterized protein LOC111201501 [Brassica napus] >RID42286.1 hypothetical protein BRARA_J02186 [Brassica rapa] >CAF2350401.1 unnamed protein product [Brassica napus]) HSP 1 Score: 68.9 bits (167), Expect = 5.380e-13 Identity = 31/34 (91.18%), Postives = 31/34 (91.18%), Query Frame = 0 Query: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASY 34 MEDY QRPYGGMQIQPYNG PGTGDFRSYSASY Sbjct: 1 MEDYCSQRPYGGMQIQPYNGGPGTGDFRSYSASY 34
BLAST of BolC9t59317H-R vs. GenBank_protein
Match: XP_009121895.1 (uncharacterized protein LOC103846677 [Brassica rapa]) HSP 1 Score: 66.2 bits (160), Expect = 6.180e-12 Identity = 30/34 (88.24%), Postives = 30/34 (88.24%), Query Frame = 0 Query: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASY 34 MEDY QRPYGGMQIQPYNG PGTG FRSYSASY Sbjct: 1 MEDYCSQRPYGGMQIQPYNGGPGTGGFRSYSASY 34
BLAST of BolC9t59317H-R vs. GenBank_protein
Match: CAA7029992.1 (unnamed protein product [Microthlaspi erraticum] >CAA7039812.1 unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 65.5 bits (158), Expect = 1.120e-11 Identity = 29/35 (82.86%), Postives = 29/35 (82.86%), Query Frame = 0 Query: 1 MEDYGCQRPYGGMQIQPYNGVPGTGDFRSYSASYV 35 MEDY QRPYGGMQIQPY G PG GDFRSYSASY Sbjct: 1 MEDYARQRPYGGMQIQPYQGGPGAGDFRSYSASYA 35
BLAST of BolC9t59317H-R vs. GenBank_protein
Match: XP_006399717.1 (uncharacterized protein LOC18019254 [Eutrema salsugineum] >ESQ41170.1 hypothetical protein EUTSA_v10015080mg [Eutrema salsugineum]) HSP 1 Score: 64.3 bits (155), Expect = 3.700e-11 Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 Query: 1 MEDYGCQRPYG--GMQIQPYNGVPGTGDFRSYSASYV 35 MEDYG QRPYG GMQIQPY+G PG GDFRSYSASY Sbjct: 1 MEDYGRQRPYGDGGMQIQPYHGAPGAGDFRSYSASYA 37
BLAST of BolC9t59317H-R vs. GenBank_protein
Match: KFK25455.1 (hypothetical protein AALP_AA8G117500 [Arabis alpina]) HSP 1 Score: 62.8 bits (151), Expect = 1.390e-10 Identity = 31/38 (81.58%), Postives = 31/38 (81.58%), Query Frame = 0 Query: 1 MEDYGCQRPYGG---MQIQPYNGVPGTGDFRSYSASYV 35 MEDYG QRPYGG MQIQPYNG G GDFRSYSASYV Sbjct: 1 MEDYGRQRPYGGDGGMQIQPYNGEHGPGDFRSYSASYV 38 The following BLAST results are available for this feature:
BLAST of BolC9t59317H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 15
Pagesback to topInterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC9t59317H-R-P ID=BolC9t59317H-R-P|Name=BolC9t59317H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=78bpback to top Orthology
View orthology data for BolC9t59317H-R-P
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