BolC9t59092H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC9t59092H-R
Unique Name	BolC9t59092H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	976

Homology

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BLAST of BolC9t59092H-R vs. GenBank_protein
Match: VDD33769.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 1850 bits (4791), Expect = 0.000e+0
Identity = 975/975 (100.00%), Postives = 975/975 (100.00%), Query Frame = 0

Query:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975
            MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV
Sbjct:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975

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BLAST of BolC9t59092H-R vs. GenBank_protein
Match: XP_013712899.1 (polyribonucleotide nucleotidyltransferase 2, mitochondrial-like isoform X1 [Brassica napus] >XP_022565752.1 polyribonucleotide nucleotidyltransferase 2, mitochondrial-like isoform X1 [Brassica napus] >CAF1784389.1 unnamed protein product [Brassica napus])

HSP 1 Score: 1828 bits (4736), Expect = 0.000e+0
Identity = 964/975 (98.87%), Postives = 968/975 (99.28%), Query Frame = 0

Query:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975
            MSSIV RARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARF NGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMM+DVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERI SVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSR+ISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVG PKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTA QLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECD+AEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXX EESRDDCGETLTQENKLN TSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDE+DV
Sbjct:    1 MSSIVRRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFTNGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMIDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIESVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRIISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGPPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTASQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDEAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXXEESRDDCGETLTQENKLNCTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEEDV 975

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BLAST of BolC9t59092H-R vs. GenBank_protein
Match: XP_013612194.1 (PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial-like isoform X1 [Brassica oleracea var. oleracea])

HSP 1 Score: 1828 bits (4736), Expect = 0.000e+0
Identity = 963/975 (98.77%), Postives = 968/975 (99.28%), Query Frame = 0

Query:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975
            MSSIV RARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPAS GIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGG+IVVNPTMDELSSSDLHLIYACTRDKTMM+DVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEY LSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVG PKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCID+DVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECD+AEKSSHVDKNTKPK AATVKPDRKLKSTASKQT XXXXXXXXXXTEESRDDCGETLTQENKLN TSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDE+DV
Sbjct:    1 MSSIVRRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASTGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGEIVVNPTMDELSSSDLHLIYACTRDKTMMIDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYILSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGPPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDTDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDEAEKSSHVDKNTKPKCAATVKPDRKLKSTASKQTVXXXXXXXXXXTEESRDDCGETLTQENKLNCTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEEDV 975

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BLAST of BolC9t59092H-R vs. GenBank_protein
Match: CDY09870.1 (BnaC09g42910D [Brassica napus])

HSP 1 Score: 1791 bits (4638), Expect = 0.000e+0
Identity = 948/975 (97.23%), Postives = 952/975 (97.64%), Query Frame = 0

Query:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975
            MSSIV RARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARF NGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMM+DVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERI SVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSR+ISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVG PKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTA QLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECD+AEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXX EESRDDCGETLTQENKLN TSLENNSNIVSSSK                ESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDE+DV
Sbjct:    1 MSSIVRRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFTNGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMIDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIESVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRIISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGPPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTASQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDEAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXXEESRDDCGETLTQENKLNCTSLENNSNIVSSSK----------------ESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEEDV 959

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BLAST of BolC9t59092H-R vs. GenBank_protein
Match: KAF2535215.1 (hypothetical protein F2Q68_00022766 [Brassica cretica])

HSP 1 Score: 1757 bits (4550), Expect = 0.000e+0
Identity = 932/975 (95.59%), Postives = 937/975 (96.10%), Query Frame = 0

Query:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975
            MSSIV RARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAAS ALMLSDVPWGGPIGVIRLGRIGG+IVVNPTMDELSSSDLHLIYACTRDKTMM+DVQAREITEKDLAAALRLAHPEAVKYIDPQIRLA KAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVG PKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTR GVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCID+DVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVE D+AEKSSH +KNTKPKRAATVKPDRKLKSTASKQ XXXXXXXXXXX   SRDDCG                          KKP RKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV
Sbjct:    1 MSSIVRRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASTALMLSDVPWGGPIGVIRLGRIGGEIVVNPTMDELSSSDLHLIYACTRDKTMMIDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAGKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGPPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRTGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDTDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVESDEAEKSSHEEKNTKPKRAATVKPDRKLKSTASKQXXXXXXXXXXXXXXXSRDDCG--------------------------KKPCRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 949

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BLAST of BolC9t59092H-R vs. GenBank_protein
Match: XP_013667684.1 (polyribonucleotide nucleotidyltransferase 2, mitochondrial-like isoform X1 [Brassica napus])

HSP 1 Score: 1753 bits (4541), Expect = 0.000e+0
Identity = 932/975 (95.59%), Postives = 938/975 (96.21%), Query Frame = 0

Query:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975
            MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAAS ALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMM+DVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERI SVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVG PKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGI LRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTR GVTA QLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCID+DVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGE VASLPSVVEPPQKSKLAVPAVVIRTAVECD+AEKSS VDKNTKPKRAATVK             XXXXXXXXXXX              ++KL  TSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDE+DV
Sbjct:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASTALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMIDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIESVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGPPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGISLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRTGVTASQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDTDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGETVASLPSVVEPPQKSKLAVPAVVIRTAVECDEAEKSSSVDKNTKPKRAATVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKLKCTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEEDV 975

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BLAST of BolC9t59092H-R vs. GenBank_protein
Match: XP_009121656.1 (polyribonucleotide nucleotidyltransferase 2, mitochondrial [Brassica rapa] >RID42095.1 hypothetical protein BRARA_J02010 [Brassica rapa])

HSP 1 Score: 1751 bits (4536), Expect = 0.000e+0
Identity = 931/975 (95.49%), Postives = 937/975 (96.10%), Query Frame = 0

Query:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975
            MSSIV RARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAAS ALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMM+DVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERI SVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVG PKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGI LRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTR GVTA QLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCID+DVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGE VASLPSVVEPPQKSKLAVPAVVIRTAVECD+AEKSS VDKNTKPKRAATVK             XXXXXXXXXXX              ++KL  TSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDE+DV
Sbjct:    1 MSSIVRRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASTALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMIDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIESVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGPPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGISLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRTGVTASQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDTDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGETVASLPSVVEPPQKSKLAVPAVVIRTAVECDEAEKSSSVDKNTKPKRAATVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKLKCTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEEDV 975

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BLAST of BolC9t59092H-R vs. GenBank_protein
Match: VDD19599.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 1747 bits (4525), Expect = 0.000e+0
Identity = 928/975 (95.18%), Postives = 937/975 (96.10%), Query Frame = 0

Query:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975
            MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAAS ALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDEL+SSDLHLIYACTRDKTMM+DVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERI SVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVG PKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGI LRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTR GVTA QLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKR+IEEETGARLSIDDGTLTIVAKNQAVMDKAQE+VDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCID+DVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGE VASLPSVVEPPQKSKLAVPAVVIRTAVECD+AEKSS VDKNTKPKRAATVK             XXXXXXXXXXX              ++KL  TSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTE TAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDE+DV
Sbjct:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASTALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELNSSDLHLIYACTRDKTMMIDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIESVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGPPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGISLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRTGVTASQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRQIEEETGARLSIDDGTLTIVAKNQAVMDKAQERVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDTDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGETVASLPSVVEPPQKSKLAVPAVVIRTAVECDEAEKSSSVDKNTKPKRAATVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKLKCTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTETTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEEDV 975

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BLAST of BolC9t59092H-R vs. GenBank_protein
Match: CAF2347235.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 1745 bits (4520), Expect = 0.000e+0
Identity = 927/975 (95.08%), Postives = 936/975 (96.00%), Query Frame = 0

Query:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975
            MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEV IMANVLSSDGKQDPDILAANAAS ALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDEL+SSDLHLIYACTRDKTMM+DVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERI SVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVG PKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGI LRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTR GVTA QLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKR+IEEETGARLSIDDGTLTIVAKNQAVMDKAQE+VDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCID+DVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGE VASLPSVVEPPQKSKLAVPAVVIRTAVECD+AEKSS VDKNTKPKRAATVK             XXXXXXXXXXX              ++KL  TSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTE TAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDE+DV
Sbjct:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVHIMANVLSSDGKQDPDILAANAASTALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELNSSDLHLIYACTRDKTMMIDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIESVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGPPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGISLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRTGVTASQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRQIEEETGARLSIDDGTLTIVAKNQAVMDKAQERVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDTDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGETVASLPSVVEPPQKSKLAVPAVVIRTAVECDEAEKSSSVDKNTKPKRAATVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKLKCTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTETTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEEDV 975

[Close]

BLAST of BolC9t59092H-R vs. GenBank_protein
Match: XP_022549250.1 (polyribonucleotide nucleotidyltransferase 2, mitochondrial-like isoform X2 [Brassica napus])

HSP 1 Score: 1745 bits (4519), Expect = 0.000e+0
Identity = 930/975 (95.38%), Postives = 936/975 (96.00%), Query Frame = 0

Query:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTXXXXXXXXXXXTEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV 975
            MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHE  IMANVLSSDGKQDPDILAANAAS ALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMM+DVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERI SVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVG PKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGI LRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTR GVTA QLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCID+DVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGE VASLPSVVEPPQKSKLAVPAVVIRTAVECD+AEKSS VDKNTKPKRAATVK             XXXXXXXXXXX              ++KL  TSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDE+DV
Sbjct:    1 MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHE--IMANVLSSDGKQDPDILAANAASTALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMIDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIESVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGPPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGISLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRTGVTASQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDTDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGETVASLPSVVEPPQKSKLAVPAVVIRTAVECDEAEKSSSVDKNTKPKRAATVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKLKCTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEEDV 973

The following BLAST results are available for this feature:

BLAST of BolC9t59092H-R vs. GenBank_protein

BLAST of BolC9t59092H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDD33769.1	0.000e+0	100.00	unnamed protein product [Brassica oleracea]	[more]
XP_013712899.1	0.000e+0	98.87	polyribonucleotide nucleotidyltransferase 2, mitoc...	[more]
XP_013612194.1	0.000e+0	98.77	PREDICTED: polyribonucleotide nucleotidyltransfera...	[more]
CDY09870.1	0.000e+0	97.23	BnaC09g42910D [Brassica napus]	[more]
KAF2535215.1	0.000e+0	95.59	hypothetical protein F2Q68_00022766 [Brassica cret...	[more]
XP_013667684.1	0.000e+0	95.59	polyribonucleotide nucleotidyltransferase 2, mitoc...	[more]
XP_009121656.1	0.000e+0	95.49	polyribonucleotide nucleotidyltransferase 2, mitoc...	[more]
VDD19599.1	0.000e+0	95.18	unnamed protein product [Brassica rapa]	[more]
CAF2347235.1	0.000e+0	95.08	unnamed protein product [Brassica napus]	[more]
XP_022549250.1	0.000e+0	95.38	polyribonucleotide nucleotidyltransferase 2, mitoc...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000958	mitochondrial mRNA catabolic process
biological_process	GO:0000965	mitochondrial RNA 3'-end processing
biological_process	GO:0006402	mRNA catabolic process
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004654	polyribonucleotide nucleotidyltransferase activity
molecular_function	GO:0003723	RNA binding

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 671..741 e-value: 3.0E-19 score: 79.9 coord: 907..970 e-value: 0.74 score: 18.9
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 371..504 e-value: 5.9E-23 score: 81.8 coord: 61..190 e-value: 5.9E-20 score: 72.1
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 49..281 e-value: 1.7E-77 score: 261.8
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 282..607 e-value: 5.7E-119 score: 398.8
IPR012162	Polyribonucleotide nucleotidyltransferase	TIGRFAM	TIGR03591	TIGR03591	coord: 58..742 e-value: 4.1E-239 score: 793.5
IPR012162	Polyribonucleotide nucleotidyltransferase	PANTHER	PTHR11252	POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE	coord: 43..807
IPR012162	Polyribonucleotide nucleotidyltransferase	HAMAP	MF_01595	PNPase	coord: 50..744 score: 25.219839
IPR015847	Exoribonuclease, phosphorolytic domain 2	PFAM	PF03725	RNase_PH_C	coord: 193..255 e-value: 2.3E-11 score: 43.6
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 672..741 e-value: 1.3E-10 score: 41.5
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 673..741 score: 18.356241
None	No IPR available	GENE3D	2.40.50.140		coord: 671..743 e-value: 1.3E-20 score: 75.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 842..858
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 859..880
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 802..835
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 802..904
None	No IPR available	PANTHER	PTHR11252:SF0	POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIAL	coord: 43..807
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 604..662 score: 8.219245
None	No IPR available	CDD	cd04472	S1_PNPase	coord: 673..739 e-value: 6.38163E-26 score: 99.5392
None	No IPR available	CDD	cd11363	RNase_PH_PNPase_1	coord: 52..279 e-value: 4.74669E-116 score: 353.361
None	No IPR available	CDD	cd11364	RNase_PH_PNPase_2	coord: 371..599 e-value: 1.42822E-139 score: 414.251
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 608..666 e-value: 7.2E-9 score: 37.2
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 607..667
IPR015848	Polyribonucleotide nucleotidyltransferase, RNA-binding domain	PFAM	PF03726	PNPase	coord: 289..368 e-value: 3.4E-18 score: 65.9
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 184..277
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 498..601
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 348..547
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 48..190
IPR036456	Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily	SUPERFAMILY	46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	coord: 272..374
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 662..746
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 894..961

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C9	contig	C9:56957017..56961722 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC9t59092H-R	BolC9t59092H-R	Brassica oleracea HDEM	mRNA	C9 56957017..56961722 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC9t59092H-R-P ID=BolC9t59092H-R-P|Name=BolC9t59092H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=976bp
MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILE
SFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPG
DFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFP
SGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRL
GRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAA
LRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERI
VSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRK
KIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLC
TITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVG
HGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMD
AGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKI
AGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPR
DQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAK
NQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLL
HMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSR
PEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVEC
DDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTVKEDETLSSTATEES
RDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPS
ISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGD
TLQVKCTSFSSKGIPVMALVDEDDV.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing
GO:0006402	mRNA catabolic process
GO:0000965	mitochondrial RNA 3'-end processing
GO:0000958	mitochondrial mRNA catabolic process
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0004654	polyribonucleotide nucleotidyltransferase activity
GO:0003723	RNA binding
GO:0000175	3'-5'-exoribonuclease activity

Vocabulary: **INTERPRO**
Term	Definition
IPR012340	NA-bd_OB-fold
IPR036456	PNPase_PH_RNA-bd_sf
IPR020568	Ribosomal_S5_D2-typ_fold
IPR036345	ExoRNase_PH_dom2_sf
IPR015848	PNPase_PH_RNA-bd_bac/org-type
IPR036612	KH_dom_type_1_sf
IPR003029	S1_domain
IPR015847	ExoRNase_PH_dom2
IPR012162	PNPase
IPR027408	PNPase/RNase_PH_dom_sf
IPR001247	ExoRNase_PH_dom1
IPR022967	S1_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0005829	cytosol
GO:0005739	mitochondrion

Orthology

View orthology data for BolC9t59092H-R-P