BolC9t58954H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC9t58954H-R
Unique Name	BolC9t58954H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	368

Homology

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BLAST of BolC9t58954H-R vs. GenBank_protein
Match: VDD33631.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 730 bits (1885), Expect = 1.140e-265
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0

Query:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367
            MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI
Sbjct:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367

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BLAST of BolC9t58954H-R vs. GenBank_protein
Match: KAF3567442.1 (hypothetical protein DY000_02018893 [Brassica cretica])

HSP 1 Score: 728 bits (1878), Expect = 1.330e-264
Identity = 365/367 (99.46%), Postives = 367/367 (100.00%), Query Frame = 0

Query:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367
            MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVD+ILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSV+DGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI
Sbjct:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367

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BLAST of BolC9t58954H-R vs. GenBank_protein
Match: XP_013720936.2 (S-adenosylmethionine decarboxylase proenzyme 2 [Brassica napus] >CAF1782900.1 unnamed protein product [Brassica napus] >CDY26478.1 BnaC09g41900D [Brassica napus])

HSP 1 Score: 723 bits (1867), Expect = 6.300e-263
Identity = 364/367 (99.18%), Postives = 366/367 (99.73%), Query Frame = 0

Query:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367
            MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVD+ILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSV+DG FAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI
Sbjct:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGLFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367

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BLAST of BolC9t58954H-R vs. GenBank_protein
Match: XP_013613013.1 (PREDICTED: S-adenosylmethionine decarboxylase proenzyme 2 [Brassica oleracea var. oleracea])

HSP 1 Score: 723 bits (1867), Expect = 6.300e-263
Identity = 363/367 (98.91%), Postives = 365/367 (99.46%), Query Frame = 0

Query:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367
            MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVD+ILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSV+DGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQK YDS LSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI
Sbjct:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKGYDSDLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367

[Close]

BLAST of BolC9t58954H-R vs. GenBank_protein
Match: KAF2537178.1 (hypothetical protein F2Q68_00022683 [Brassica cretica])

HSP 1 Score: 723 bits (1867), Expect = 6.300e-263
Identity = 363/367 (98.91%), Postives = 365/367 (99.46%), Query Frame = 0

Query:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367
            MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLR LPKSHVD+ILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSV+DGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEG AISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI
Sbjct:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRVLPKSHVDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367

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BLAST of BolC9t58954H-R vs. GenBank_protein
Match: KAG2273835.1 (hypothetical protein Bca52824_056390 [Brassica carinata])

HSP 1 Score: 717 bits (1852), Expect = 1.220e-260
Identity = 360/367 (98.09%), Postives = 363/367 (98.91%), Query Frame = 0

Query:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367
            MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKS +D+ILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSV+DGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNN YTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEG AISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVH SVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI
Sbjct:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNAYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHFSVAQKSYDSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367

[Close]

BLAST of BolC9t58954H-R vs. GenBank_protein
Match: XP_013667804.2 (S-adenosylmethionine decarboxylase proenzyme 2 [Brassica napus])

HSP 1 Score: 708 bits (1828), Expect = 5.760e-257
Identity = 357/368 (97.01%), Postives = 364/368 (98.91%), Query Frame = 0

Query:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYD-SGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367
            MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKS +D+ILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAG +SLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSV+DGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNS+NNVYTLEMCMTGLDKDKASVF+KNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEG AISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVS+VLTCFEPKQFSVAVHSSVAQKSYD SGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI
Sbjct:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGGVSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSDNNVYTLEMCMTGLDKDKASVFFKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSRVLTCFEPKQFSVAVHSSVAQKSYDHSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 368

[Close]

BLAST of BolC9t58954H-R vs. GenBank_protein
Match: VDD19418.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 705 bits (1819), Expect = 1.360e-255
Identity = 354/368 (96.20%), Postives = 363/368 (98.64%), Query Frame = 0

Query:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYD-SGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367
            MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKS +D+ILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAG +SLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSV+DGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKN+N +NNVYTLEMCMTGLDKDKASVF+KNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEG A+STIHVTPEDGFSYASFEAVGYDFTTMDLSHLVS+VLTCFEPKQFSVAVHSSVAQKSYD SGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI
Sbjct:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGGVSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNSNGDNNVYTLEMCMTGLDKDKASVFFKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDAVSTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSRVLTCFEPKQFSVAVHSSVAQKSYDHSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 368

[Close]

BLAST of BolC9t58954H-R vs. GenBank_protein
Match: RID42003.1 (hypothetical protein BRARA_J01921 [Brassica rapa] >CAF2345716.1 unnamed protein product [Brassica napus])

HSP 1 Score: 700 bits (1806), Expect = 1.300e-253
Identity = 353/368 (95.92%), Postives = 363/368 (98.64%), Query Frame = 0

Query:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYD-SGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367
            MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRAL KS +D+ILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRL+G +SLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSV+DGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKN+NS+NNVYTLEMCMTGLDKDKASVF+KNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEG AISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVS+VLTCFEPKQFSVAV+SSVAQKSYD SGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI
Sbjct:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALSKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLSGGVSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNSNSDNNVYTLEMCMTGLDKDKASVFFKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSRVLTCFEPKQFSVAVNSSVAQKSYDHSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 368

[Close]

BLAST of BolC9t58954H-R vs. GenBank_protein
Match: XP_009121533.3 (S-adenosylmethionine decarboxylase proenzyme 2 [Brassica rapa])

HSP 1 Score: 697 bits (1800), Expect = 1.070e-252
Identity = 352/368 (95.65%), Postives = 361/368 (98.10%), Query Frame = 0

Query:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSYD-SGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 367
            MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRAL KS +D+ILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAG +SLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSV+DGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKN+N +NNVYTLEMCMTGLDKDKASVF+KNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEG AISTIHVTPEDGFSYASFEAVGYDFTTMDLS LVS+VLTCFEPKQFSVAVHSSVAQKSYD SGLSVDLEDYGCRETTVESLGEERGTV+YQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI
Sbjct:    1 MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALSKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGGVSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNSNGDNNVYTLEMCMTGLDKDKASVFFKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSQLVSRVLTCFEPKQFSVAVHSSVAQKSYDHSGLSVDLEDYGCRETTVESLGEERGTVIYQRFEKLGMYCGSPRSTLKCEWSSNSSCTSEDEKEEGI 368

The following BLAST results are available for this feature:

BLAST of BolC9t58954H-R vs. GenBank_protein

BLAST of BolC9t58954H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDD33631.1	1.140e-265	100.00	unnamed protein product [Brassica oleracea]	[more]
KAF3567442.1	1.330e-264	99.46	hypothetical protein DY000_02018893 [Brassica cret...	[more]
XP_013720936.2	6.300e-263	99.18	S-adenosylmethionine decarboxylase proenzyme 2 [Br...	[more]
XP_013613013.1	6.300e-263	98.91	PREDICTED: S-adenosylmethionine decarboxylase proe...	[more]
KAF2537178.1	6.300e-263	98.91	hypothetical protein F2Q68_00022683 [Brassica cret...	[more]
KAG2273835.1	1.220e-260	98.09	hypothetical protein Bca52824_056390 [Brassica car...	[more]
XP_013667804.2	5.760e-257	97.01	S-adenosylmethionine decarboxylase proenzyme 2 [Br...	[more]
VDD19418.1	1.360e-255	96.20	unnamed protein product [Brassica rapa]	[more]
RID42003.1	1.300e-253	95.92	hypothetical protein BRARA_J01921 [Brassica rapa] ...	[more]
XP_009121533.3	1.070e-252	95.65	S-adenosylmethionine decarboxylase proenzyme 2 [Br...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006557	S-adenosylmethioninamine biosynthetic process
biological_process	GO:0008295	spermidine biosynthetic process
biological_process	GO:0006597	spermine biosynthetic process
molecular_function	GO:0004014	adenosylmethionine decarboxylase activity

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001985	S-adenosylmethionine decarboxylase	PFAM	PF01536	SAM_decarbox	coord: 7..334 e-value: 5.2E-108 score: 361.2
IPR001985	S-adenosylmethionine decarboxylase	PIRSF	PIRSF001355	SAM_decarbox_euk	coord: 1..337 e-value: 1.0E-104 score: 347.5
IPR001985	S-adenosylmethionine decarboxylase	TIGRFAM	TIGR00535	TIGR00535	coord: 8..335 e-value: 5.2E-125 score: 414.8
IPR001985	S-adenosylmethionine decarboxylase	PANTHER	PTHR11570	S-ADENOSYLMETHIONINE DECARBOXYLASE	coord: 2..367
None	No IPR available	GENE3D	3.60.90.10		coord: 69..336 e-value: 6.0E-97 score: 326.0
None	No IPR available	GENE3D	3.30.360.50		coord: 1..68 e-value: 9.5E-24 score: 85.2
None	No IPR available	PANTHER	PTHR11570:SF21	S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 1	coord: 2..367
IPR018166	S-adenosylmethionine decarboxylase, conserved site	PROSITE	PS01336	ADOMETDC	coord: 63..73
IPR016067	S-adenosylmethionine decarboxylase, core	SUPERFAMILY	56276	S-adenosylmethionine decarboxylase	coord: 11..333

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C9	contig	C9:56070291..56071394 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC9t58954H-R	BolC9t58954H-R	Brassica oleracea HDEM	mRNA	C9 56070291..56071394 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC9t58954H-R-P ID=BolC9t58954H-R-P|Name=BolC9t58954H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=368bp
MSLSAIGFEGYEKRLEVSFFEPSLFLDTHGKGLRALPKSHVDDILAPAEC
TIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAG
ELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVVDGHFAKMGLSSVAY
LMGDDDETKKWHVYSASAPAKNTNSNNNVYTLEMCMTGLDKDKASVFYKN
ESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGGAISTIHVTP
EDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVAQKSY
DSGLSVDLEDYGCRETTVESLGEERGTVMYQRFEKLGMYCGSPRSTLKCE
WSSNSSCTSEDEKEEGI.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016067	S-AdoMet_deCO2ase_core
IPR018166	S-AdoMet_deCO2ase_CS
IPR001985	S-AdoMet_decarboxylase

Vocabulary: **Biological Process**
Term	Definition
GO:0008295	spermidine biosynthetic process
GO:0006597	spermine biosynthetic process
GO:0006557	S-adenosylmethioninamine biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004014	adenosylmethionine decarboxylase activity

Orthology

View orthology data for BolC9t58954H-R-P