BolC9t58788H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC9t58788H-R
Unique Name	BolC9t58788H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	299

Homology

[Close]

BLAST of BolC9t58788H-R vs. GenBank_protein
Match: VDD33465.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 575 bits (1481), Expect = 2.030e-206
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0

Query:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298
            MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ
Sbjct:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298

[Close]

BLAST of BolC9t58788H-R vs. GenBank_protein
Match: XP_013613095.1 (PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Brassica oleracea var. oleracea])

HSP 1 Score: 572 bits (1475), Expect = 1.670e-205
Identity = 297/298 (99.66%), Postives = 297/298 (99.66%), Query Frame = 0

Query:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298
            MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGW RENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ
Sbjct:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWLRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298

[Close]

BLAST of BolC9t58788H-R vs. GenBank_protein
Match: KAG2273684.1 (hypothetical protein Bca52824_056239 [Brassica carinata])

HSP 1 Score: 571 bits (1471), Expect = 6.780e-205
Identity = 296/298 (99.33%), Postives = 297/298 (99.66%), Query Frame = 0

Query:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298
            MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNA+SGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGW RENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ
Sbjct:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNAESGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWLRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298

[Close]

BLAST of BolC9t58788H-R vs. GenBank_protein
Match: CDY16899.1 (BnaC09g40260D [Brassica napus])

HSP 1 Score: 568 bits (1465), Expect = 5.570e-204
Identity = 296/298 (99.33%), Postives = 296/298 (99.33%), Query Frame = 0

Query:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298
            MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSA LDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGW RENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ
Sbjct:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSASLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWLRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298

[Close]

BLAST of BolC9t58788H-R vs. GenBank_protein
Match: XP_013722270.1 (uncharacterized protein LOC106426101 [Brassica napus])

HSP 1 Score: 568 bits (1465), Expect = 8.680e-204
Identity = 296/298 (99.33%), Postives = 296/298 (99.33%), Query Frame = 0

Query:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298
            MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSA LDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGW RENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ
Sbjct:   13 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSASLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWLRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 310

[Close]

BLAST of BolC9t58788H-R vs. GenBank_protein
Match: XP_013722271.1 (uncharacterized protein LOC106426104 [Brassica napus] >XP_013722348.1 uncharacterized protein LOC106426186 [Brassica napus])

HSP 1 Score: 564 bits (1454), Expect = 4.120e-202
Identity = 294/298 (98.66%), Postives = 295/298 (98.99%), Query Frame = 0

Query:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298
            MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSA LDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGW RENPMGIRTEREIHAELEGARIYRRLYQKKILI SL+
Sbjct:   13 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSASLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWLRENPMGIRTEREIHAELEGARIYRRLYQKKILIDSLK 310

[Close]

BLAST of BolC9t58788H-R vs. GenBank_protein
Match: CAF1781243.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 555 bits (1429), Expect = 4.300e-198
Identity = 296/323 (91.64%), Postives = 296/323 (91.64%), Query Frame = 0

Query:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISE-------------------------EVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298
            MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSA LDVKEVRSTDLVDLEYADLNLKYKISE                         EVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGW RENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ
Sbjct:    1 MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSASLDVKEVRSTDLVDLEYADLNLKYKISEVSSFHLSLSSFSLSSFLLLTFFCLQEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWLRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 323

[Close]

BLAST of BolC9t58788H-R vs. GenBank_protein
Match: CAF2343254.1 (unnamed protein product [Brassica napus] >CDY38451.1 BnaA10g17070D [Brassica napus])

HSP 1 Score: 521 bits (1341), Expect = 5.890e-185
Identity = 281/309 (90.94%), Postives = 287/309 (92.88%), Query Frame = 0

Query:    1 MGSLTQACSSSS-LAKSVFSLASS-PFIFTSRRK---------FRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298
            MGSLTQACSSSS LAKSVFSLASS PF+FTSRRK         FRASTS  +   S C+D KEVRSTDLVDLEYA+LNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNA+SGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFD LISSY GPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGW RENPMGIRTEREIHAELEGARIYRRLYQKKILI SL+
Sbjct:    1 MGSLTQACSSSSSLAKSVFSLASSSPFLFTSRRKITRHYSSSFFRASTSPLA---SVCVDSKEVRSTDLVDLEYAELNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNAESGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDQLISSYPGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWLRENPMGIRTEREIHAELEGARIYRRLYQKKILIDSLK 306

[Close]

BLAST of BolC9t58788H-R vs. GenBank_protein
Match: VDD19130.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 520 bits (1339), Expect = 1.190e-184
Identity = 281/309 (90.94%), Postives = 286/309 (92.56%), Query Frame = 0

Query:    1 MGSLTQACSSSS-LAKSVFSLASS-PFIFTSRRK---------FRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298
            MGSLTQACSSSS LAKSVFSLASS PF+FTSRRK         FRASTS  +   S CLD KEVRSTDLVDLEYADL+LKYKISEEVGHVRIRQHVNPLSSSFSTPAPVP WEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNA+SGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFD LISSY GPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGW RENPMGIRTEREIHAELEGARIYRRLYQKKILI SL+
Sbjct:    1 MGSLTQACSSSSSLAKSVFSLASSSPFLFTSRRKITRHYSSSFFRASTSPLA---SVCLDSKEVRSTDLVDLEYADLSLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPVWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNAESGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDQLISSYPGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWLRENPMGIRTEREIHAELEGARIYRRLYQKKILIDSLK 306

[Close]

BLAST of BolC9t58788H-R vs. GenBank_protein
Match: XP_013680682.1 (uncharacterized protein LOC106385300 [Brassica napus])

HSP 1 Score: 519 bits (1337), Expect = 2.400e-184
Identity = 280/309 (90.61%), Postives = 287/309 (92.88%), Query Frame = 0

Query:    1 MGSLTQACSSSS-LAKSVFSLASS-PFIFTSRRK---------FRASTSASSASNSACLDVKEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRANFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ 298
            MGSLTQACSSSS LAKSVFSLASS PF+FTSRRK         FRASTS  +   S C+D KEVRSTDLVDLEYA+LNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNA+SGNYLGLEIRQKLV+RANFWVNELGLSNAHFIFANAMVSFD LISSY GPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGW RENPMGIRTEREIHAELEGARIYRRLYQKKILI SL+
Sbjct:    1 MGSLTQACSSSSSLAKSVFSLASSSPFLFTSRRKITRHYSSSFFRASTSPLA---SVCVDSKEVRSTDLVDLEYAELNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPAWEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNAESGNYLGLEIRQKLVERANFWVNELGLSNAHFIFANAMVSFDQLISSYPGPLEFVSILCPDPHFKKRHHKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEHVDTVDTEEGWLRENPMGIRTEREIHAELEGARIYRRLYQKKILIDSLK 306

The following BLAST results are available for this feature:

BLAST of BolC9t58788H-R vs. GenBank_protein

BLAST of BolC9t58788H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDD33465.1	2.030e-206	100.00	unnamed protein product [Brassica oleracea]	[more]
XP_013613095.1	1.670e-205	99.66	PREDICTED: tRNA (guanine-N(7)-)-methyltransferase ...	[more]
KAG2273684.1	6.780e-205	99.33	hypothetical protein Bca52824_056239 [Brassica car...	[more]
CDY16899.1	5.570e-204	99.33	BnaC09g40260D [Brassica napus]	[more]
XP_013722270.1	8.680e-204	99.33	uncharacterized protein LOC106426101 [Brassica nap...	[more]
XP_013722271.1	4.120e-202	98.66	uncharacterized protein LOC106426104 [Brassica nap...	[more]
CAF1781243.1	4.300e-198	91.64	unnamed protein product [Brassica napus]	[more]
CAF2343254.1	5.890e-185	90.94	unnamed protein product [Brassica napus] >CDY38451...	[more]
VDD19130.1	1.190e-184	90.94	unnamed protein product [Brassica rapa]	[more]
XP_013680682.1	2.400e-184	90.61	uncharacterized protein LOC106385300 [Brassica nap...	[more]

Pages

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0106004	tRNA (guanine-N7)-methylation
biological_process	GO:0006400	tRNA modification
cellular_component	GO:0043527	tRNA methyltransferase complex
molecular_function	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..251
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 80..293 e-value: 7.9E-58 score: 197.1
None	No IPR available	PANTHER	PTHR23417:SF21	TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE	coord: 29..290
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 114..227 e-value: 1.69143E-6 score: 43.9579
None	No IPR available	SIGNALP_GRAM_POSITIVE	SignalP-TM	SignalP-TM	coord: 1..21 score: 0.48
IPR003358	tRNA (guanine-N-7) methyltransferase, Trmb type	TIGRFAM	TIGR00091	TIGR00091	coord: 99..290 e-value: 9.1E-38 score: 127.5
IPR003358	tRNA (guanine-N-7) methyltransferase, Trmb type	PFAM	PF02390	Methyltransf_4	coord: 111..285 e-value: 3.8E-37 score: 127.4
IPR003358	tRNA (guanine-N-7) methyltransferase, Trmb type	PANTHER	PTHR23417	3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE	coord: 29..290
IPR003358	tRNA (guanine-N-7) methyltransferase, Trmb type	HAMAP	MF_01057	tRNA_methyltr_TrmB	coord: 81..291 score: 20.483414
IPR003358	tRNA (guanine-N-7) methyltransferase, Trmb type	PROSITE	PS51625	SAM_MT_TRMB	coord: 69..290 score: 58.928242
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 108..288

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C9	contig	C9:55021595..55023357 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC9t58788H-R	BolC9t58788H-R	Brassica oleracea HDEM	mRNA	C9 55021595..55023357 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC9t58788H-R-P ID=BolC9t58788H-R-P|Name=BolC9t58788H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=299bp
MGSLTQACSSSSLAKSVFSLASSPFIFTSRRKFRASTSASSASNSACLDV
KEVRSTDLVDLEYADLNLKYKISEEVGHVRIRQHVNPLSSSFSTPAPVPA
WEEVYKDPSLPLMVDIGSGSGRFLLWLAKKNADSGNYLGLEIRQKLVKRA
NFWVNELGLSNAHFIFANAMVSFDHLISSYRGPLEFVSILCPDPHFKKRH
HKRRVVQKPLVDSILKNLKPGGKIFVQSDVLDVAQDMRDQLDEEAKVLEH
VDTVDTEEGWSRENPMGIRTEREIHAELEGARIYRRLYQKKILIGSLQ.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **Biological Process**
Term	Definition
GO:0006400	tRNA modification
GO:0106004	tRNA (guanine-N7)-methylation

Vocabulary: **INTERPRO**
Term	Definition
IPR029063	SAM-dependent_MTases
IPR003358	tRNA_(Gua-N-7)_MeTrfase_Trmb

Vocabulary: **Molecular Function**
Term	Definition
GO:0008176	tRNA (guanine-N7-)-methyltransferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0043527	tRNA methyltransferase complex

Orthology

View orthology data for BolC9t58788H-R-P