BolC9t58233H-R-P (polypeptide) Brassica oleracea HDEM
Overview
Homology
BLAST of BolC9t58233H-R vs. GenBank_protein
Match: KAF2594168.1 (hypothetical protein F2Q70_00044306 [Brassica cretica] >CAF1773144.1 unnamed protein product [Brassica napus] >VDD32910.1 unnamed protein product [Brassica oleracea] >KAF2608159.1 hypothetical protein F2Q68_00045264 [Brassica cretica] >KAF3519209.1 hypothetical protein DY000_02062025 [Brassica cretica]) HSP 1 Score: 148 bits (374), Expect = 5.130e-45 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 Query: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF 72 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF Sbjct: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF 72
BLAST of BolC9t58233H-R vs. GenBank_protein
Match: KAF2539159.1 (hypothetical protein F2Q68_00022198 [Brassica cretica]) HSP 1 Score: 145 bits (365), Expect = 1.210e-43 Identity = 70/72 (97.22%), Postives = 70/72 (97.22%), Query Frame = 0 Query: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF 72 M KVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCL FLSGVRTFIFFTAAIF Sbjct: 1 MTKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLRFLSGVRTFIFFTAAIF 72
BLAST of BolC9t58233H-R vs. GenBank_protein
Match: VDD51909.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 144 bits (364), Expect = 1.720e-43 Identity = 70/72 (97.22%), Postives = 70/72 (97.22%), Query Frame = 0 Query: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF 72 MAKVKS SYLIRLGHLDSSPWHPATSLATSHV FVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF Sbjct: 1 MAKVKSDSYLIRLGHLDSSPWHPATSLATSHVFFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF 72
BLAST of BolC9t58233H-R vs. GenBank_protein
Match: KAF3519206.1 (hypothetical protein DY000_02062026 [Brassica cretica]) HSP 1 Score: 140 bits (352), Expect = 1.170e-41 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0 Query: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF 72 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAA IDL+WSN DYLPPLSCLSFLSGVRTFIFFTAAIF Sbjct: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAALIDLQWSNCDYLPPLSCLSFLSGVRTFIFFTAAIF 72
BLAST of BolC9t58233H-R vs. GenBank_protein
Match: KAF3523569.1 (hypothetical protein F2Q69_00049811 [Brassica cretica]) HSP 1 Score: 136 bits (342), Expect = 3.930e-40 Identity = 68/72 (94.44%), Postives = 69/72 (95.83%), Query Frame = 0 Query: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF 72 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAA IDL+WSN DYL PLSCLSFLSGVRTFIFFTAAIF Sbjct: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAALIDLQWSNCDYLLPLSCLSFLSGVRTFIFFTAAIF 72
BLAST of BolC9t58233H-R vs. GenBank_protein
Match: KAF3519207.1 (hypothetical protein DY000_02062027 [Brassica cretica]) HSP 1 Score: 133 bits (334), Expect = 6.920e-39 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 Query: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRT 63 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRT Sbjct: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRT 63
BLAST of BolC9t58233H-R vs. GenBank_protein
Match: KAF2571551.1 (hypothetical protein F2Q70_00005646 [Brassica cretica] >KAF3567256.1 hypothetical protein DY000_02018173 [Brassica cretica]) HSP 1 Score: 105 bits (261), Expect = 6.380e-28 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 Query: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYL 49 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYL Sbjct: 1 MAKVKSASYLIRLGHLDSSPWHPATSLATSHVIFVAAPIDLRWSNRDYL 49
BLAST of BolC9t58233H-R vs. GenBank_protein
Match: CAF1857378.1 (unnamed protein product [Brassica napus] >CDY33696.1 BnaC04g29550D [Brassica napus] >VDD10922.1 unnamed protein product [Brassica oleracea]) HSP 1 Score: 99.8 bits (247), Expect = 1.260e-25 Identity = 56/74 (75.68%), Postives = 60/74 (81.08%), Query Frame = 0 Query: 1 MAKVKSASYLIRLGHLDSSPWH--PATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF 72 MAKVKSAS+ + + S+P H PATSLATS VIFVAAPIDLRWSNRDYL PLSCL FLSGVR FIF TAAIF Sbjct: 1 MAKVKSASHTLFVS-ATSTPRHGTPATSLATSPVIFVAAPIDLRWSNRDYLIPLSCLRFLSGVRAFIFLTAAIF 73
BLAST of BolC9t58233H-R vs. GenBank_protein
Match: CAF2069381.1 (unnamed protein product [Brassica napus] >CAF2154169.1 unnamed protein product [Brassica napus]) HSP 1 Score: 97.8 bits (242), Expect = 7.120e-25 Identity = 55/73 (75.34%), Postives = 59/73 (80.82%), Query Frame = 0 Query: 1 MAKVKSASYLIRLGHLDSSPWH-PATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF 72 MAKVKSAS + + S+P H ATS ATS VIFVAAPIDLRWSNR+YLPPLSCLSFL GVR FIFFTAAIF Sbjct: 1 MAKVKSASLTLFVS-ATSTPRHGTATSPATSPVIFVAAPIDLRWSNREYLPPLSCLSFLCGVRAFIFFTAAIF 72
BLAST of BolC9t58233H-R vs. GenBank_protein
Match: KAF3552924.1 (hypothetical protein F2Q69_00015897 [Brassica cretica]) HSP 1 Score: 96.7 bits (239), Expect = 2.100e-24 Identity = 55/74 (74.32%), Postives = 59/74 (79.73%), Query Frame = 0 Query: 1 MAKVKSASYLIRLGHLDSSPWH--PATSLATSHVIFVAAPIDLRWSNRDYLPPLSCLSFLSGVRTFIFFTAAIF 72 MAKVKSAS+ + + S+P H PATSLATS VI VAAPIDLRWSNRDYL PLSCL FLSGVR FIF TAAIF Sbjct: 1 MAKVKSASHTLFVS-ATSAPRHGTPATSLATSPVISVAAPIDLRWSNRDYLIPLSCLRFLSGVRAFIFLTAAIF 73 The following BLAST results are available for this feature:
BLAST of BolC9t58233H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 12
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC9t58233H-R-P ID=BolC9t58233H-R-P|Name=BolC9t58233H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=73bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Orthology
View orthology data for BolC9t58233H-R-P
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