BolC9t58196H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC9t58196H-R
Unique Name	BolC9t58196H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	380

Homology

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BLAST of BolC9t58196H-R vs. GenBank_protein
Match: XP_013606091.1 (PREDICTED: F-box/kelch-repeat protein At5g60570 [Brassica oleracea var. oleracea] >XP_013606092.1 PREDICTED: F-box/kelch-repeat protein At5g60570 [Brassica oleracea var. oleracea] >XP_013606093.1 PREDICTED: F-box/kelch-repeat protein At5g60570 [Brassica oleracea var. oleracea] >XP_013660679.1 F-box/kelch-repeat protein At5g60570 [Brassica napus] >XP_013660680.1 F-box/kelch-repeat protein At5g60570 [Brassica napus] >XP_013660681.1 F-box/kelch-repeat protein At5g60570 [Brassica napus] >KAF3567865.1 hypothetical protein DY000_02018132 [Brassica cretica] >KAG2274628.1 hypothetical protein Bca52824_057183 [Brassica carinata] >VDD32873.1 unnamed protein product [Brassica oleracea] >CAF1772529.1 unnamed protein product [Brassica napus])

HSP 1 Score: 654 bits (1688), Expect = 3.030e-235
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0

Query:    1 MAAEEHSPQRSQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379
            MAAEEHSPQRSQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC
Sbjct:    1 MAAEEHSPQRSQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379

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BLAST of BolC9t58196H-R vs. GenBank_protein
Match: KAF2537251.1 (hypothetical protein F2Q68_00022181 [Brassica cretica])

HSP 1 Score: 652 bits (1683), Expect = 1.750e-234
Identity = 378/379 (99.74%), Postives = 378/379 (99.74%), Query Frame = 0

Query:    1 MAAEEHSPQRSQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379
            MAAEEHSPQR QVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC
Sbjct:    1 MAAEEHSPQRCQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379

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BLAST of BolC9t58196H-R vs. GenBank_protein
Match: KAF3501359.1 (hypothetical protein F2Q69_00044285 [Brassica cretica])

HSP 1 Score: 647 bits (1668), Expect = 3.370e-232
Identity = 376/379 (99.21%), Postives = 377/379 (99.47%), Query Frame = 0

Query:    1 MAAEEHSPQRSQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379
            MAAEEHSPQRSQVSASASV+EN AQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAW PKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC
Sbjct:    1 MAAEEHSPQRSQVSASASVVENVAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWSPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379

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BLAST of BolC9t58196H-R vs. GenBank_protein
Match: RID41448.1 (hypothetical protein BRARA_J01409 [Brassica rapa] >CAF2336448.1 unnamed protein product [Brassica napus] >CDY31534.1 BnaA10g13370D [Brassica napus] >VDD18367.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 637 bits (1642), Expect = 2.650e-228
Identity = 372/379 (98.15%), Postives = 375/379 (98.94%), Query Frame = 0

Query:    1 MAAEEHSPQRSQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379
            MAAEE    +SQVSASASV+ENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGD+LLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC
Sbjct:    1 MAAEE----QSQVSASASVVENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDQLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 375

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BLAST of BolC9t58196H-R vs. GenBank_protein
Match: XP_033138847.1 (F-box/kelch-repeat protein At5g60570 [Brassica rapa])

HSP 1 Score: 637 bits (1642), Expect = 8.970e-228
Identity = 372/379 (98.15%), Postives = 375/379 (98.94%), Query Frame = 0

Query:    1 MAAEEHSPQRSQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379
            MAAEE    +SQVSASASV+ENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGD+LLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC
Sbjct:   34 MAAEE----QSQVSASASVVENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDQLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 408

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BLAST of BolC9t58196H-R vs. GenBank_protein
Match: XP_013667142.1 (F-box/kelch-repeat protein At5g60570 [Brassica napus])

HSP 1 Score: 637 bits (1642), Expect = 1.000e-227
Identity = 372/379 (98.15%), Postives = 375/379 (98.94%), Query Frame = 0

Query:    1 MAAEEHSPQRSQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379
            MAAEE    +SQVSASASV+ENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGD+LLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC
Sbjct:   37 MAAEE----QSQVSASASVVENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDQLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 411

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BLAST of BolC9t58196H-R vs. GenBank_protein
Match: KAF8102344.1 (hypothetical protein N665_0198s0056 [Sinapis alba])

HSP 1 Score: 635 bits (1638), Expect = 1.450e-227
Identity = 367/383 (95.82%), Postives = 377/383 (98.43%), Query Frame = 0

Query:    1 MAAEEHSPQRSQVS----ASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379
            MAAEEHSP+R ++S    +SAS++ENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIK GHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPK+PCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKE+NKWEVMGRLPPMVDSSNGWGLAFKPCGD+LLVVCGQRGSNGEG+VVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC
Sbjct:    1 MAAEEHSPERRELSPSSSSSASIVENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKGGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKIPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKEKNKWEVMGRLPPMVDSSNGWGLAFKPCGDQLLVVCGQRGSNGEGIVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 383

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BLAST of BolC9t58196H-R vs. GenBank_protein
Match: KAG2299879.1 (hypothetical protein Bca52824_036351 [Brassica carinata])

HSP 1 Score: 621 bits (1602), Expect = 4.570e-222
Identity = 367/384 (95.57%), Postives = 373/384 (97.14%), Query Frame = 0

Query:    1 MAAEEHSP-QRSQVS----ASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379
            MAAEEHSP +R+QVS    +SASV ENDAQR RLGS+ SLLPGLIDDVALNCLAWVPRTDYPSLSCVSK YNNLIKSG LFGLRKELGIVE+LVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGS GGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKE+NKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC
Sbjct:    1 MAAEEHSPSERTQVSPSASSSASVAENDAQRPRLGSNASLLPGLIDDVALNCLAWVPRTDYPSLSCVSKNYNNLIKSGRLFGLRKELGIVEHLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSSGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKEKNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 384

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BLAST of BolC9t58196H-R vs. GenBank_protein
Match: XP_018442615.1 (PREDICTED: F-box/kelch-repeat protein At5g60570 [Raphanus sativus] >XP_018442617.1 PREDICTED: F-box/kelch-repeat protein At5g60570 [Raphanus sativus] >XP_018442618.1 PREDICTED: F-box/kelch-repeat protein At5g60570 [Raphanus sativus])

HSP 1 Score: 608 bits (1569), Expect = 4.170e-217
Identity = 355/380 (93.42%), Postives = 363/380 (95.53%), Query Frame = 0

Query:    1 MAAEEHSPQRSQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRR-WVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379
            MAAEEHSP+  QVS S SV+ENDAQR RLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSK YNNLIK  HLF LRKELGIVE+LVFMVCDPRGWL FSPTK KW VLPK+PCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRR WVKCEGMHRPRCLFASGS GGIAIVAGGTDM GN+LASAE+YDSSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERN+WEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEG+VVNAWCPKTG RDGNLDWKVIGVKENVGVFVYNCAVMGC
Sbjct:    1 MAAEEHSPETRQVSNSVSVVENDAQRPRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKNYNNLIKFNHLFALRKELGIVEHLVFMVCDPRGWLTFSPTKNKWTVLPKIPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRRWVKCEGMHRPRCLFASGSSGGIAIVAGGTDMMGNVLASAEIYDSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNEWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGIVVNAWCPKTGGRDGNLDWKVIGVKENVGVFVYNCAVMGC 380

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BLAST of BolC9t58196H-R vs. GenBank_protein
Match: VVB16742.1 (unnamed protein product [Arabis nemorensis])

HSP 1 Score: 595 bits (1534), Expect = 1.240e-211
Identity = 347/389 (89.20%), Postives = 362/389 (93.06%), Query Frame = 0

Query:    1 MAAEEHSPQRSQVSASAS----------VIENDAQRLRLGSSDSLLPGLIDDVALNCLAWVPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYGLRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWEVMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTGARDGNLDWKVIGVKENVGVFVYNCAVMGC 379
            MAAEEHSP+R +VSASAS          V ENDA RLRLG +DSLLPGLIDDVALNCLAWVPR+DYPSLSCV+KKYN LI  GHLFGLRKELGIVEYLVFMVCDPRGWLMFSP KKKWM LPKMPCDECFNHADKESLAVDDELLVFG+ELFQFAIWKY LRSR WVKCEGMHRPRCLFASGSLGGIAIVAGGTD+NGNILASAELYDSSS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVK+YDK +N WEVMGRLPPMVDSS GWGLAFKPCGD+LLV CGQRGSNGEG+VVN+WCPK+GA+DGNLDWKV+GVKENVGVFVYNCAVMGC
Sbjct:    1 MAAEEHSPERREVSASASASTSVVVNSRVGENDAHRLRLGPNDSLLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLITDGHLFGLRKELGIVEYLVFMVCDPRGWLMFSPMKKKWMELPKMPCDECFNHADKESLAVDDELLVFGKELFQFAIWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDVNGNILASAELYDSSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKKYDKAKNMWEVMGRLPPMVDSSTGWGLAFKPCGDQLLVFCGQRGSNGEGIVVNSWCPKSGAKDGNLDWKVVGVKENVGVFVYNCAVMGC 389

The following BLAST results are available for this feature:

BLAST of BolC9t58196H-R vs. GenBank_protein

BLAST of BolC9t58196H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
XP_013606091.1	3.030e-235	100.00	PREDICTED: F-box/kelch-repeat protein At5g60570 [B...	[more]
KAF2537251.1	1.750e-234	99.74	hypothetical protein F2Q68_00022181 [Brassica cret...	[more]
KAF3501359.1	3.370e-232	99.21	hypothetical protein F2Q69_00044285 [Brassica cret...	[more]
RID41448.1	2.650e-228	98.15	hypothetical protein BRARA_J01409 [Brassica rapa] ...	[more]
XP_033138847.1	8.970e-228	98.15	F-box/kelch-repeat protein At5g60570 [Brassica rap...	[more]
XP_013667142.1	1.000e-227	98.15	F-box/kelch-repeat protein At5g60570 [Brassica nap...	[more]
KAF8102344.1	1.450e-227	95.82	hypothetical protein N665_0198s0056 [Sinapis alba]	[more]
KAG2299879.1	4.570e-222	95.57	hypothetical protein Bca52824_036351 [Brassica car...	[more]
XP_018442615.1	4.170e-217	93.42	PREDICTED: F-box/kelch-repeat protein At5g60570 [R...	[more]
VVB16742.1	1.240e-211	89.20	unnamed protein product [Arabis nemorensis]	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 225..277 e-value: 2.5 score: 8.1 coord: 177..224 e-value: 5.7E-6 score: 35.8
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 213..258 e-value: 2.8E-7 score: 30.0 coord: 165..210 e-value: 1.3E-8 score: 34.3
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 41..72 e-value: 7.6E-5 score: 22.5
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 91..355 e-value: 4.0E-37 score: 129.7
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 97..346
None	No IPR available	PANTHER	PTHR46122	GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED	coord: 25..379
None	No IPR available	PANTHER	PTHR46122:SF1	GALACTOSE OXIDASE/KELCH REPEAT PROTEIN	coord: 25..379
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 38..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C9	contig	C9:50429147..50430286 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC9t58196H-R	BolC9t58196H-R	Brassica oleracea HDEM	mRNA	C9 50429147..50430286 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC9t58196H-R-P ID=BolC9t58196H-R-P|Name=BolC9t58196H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=380bp
MAAEEHSPQRSQVSASASVIENDAQRLRLGSSDSLLPGLIDDVALNCLAW
VPRTDYPSLSCVSKKYNNLIKSGHLFGLRKELGIVEYLVFMVCDPRGWLM
FSPTKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELFQFAIWKYG
LRSRRWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDSS
SGRWEMLPNMHSPRRLCSGFFMDGRFYVVGGMSSPNVSVTCGEEFDLETR
KWRKIEGMYPNVNRAAQAPPLVVVVNNELFTLEYLTNMVKRYDKERNKWE
VMGRLPPMVDSSNGWGLAFKPCGDRLLVVCGQRGSNGEGVVVNAWCPKTG
ARDGNLDWKVIGVKENVGVFVYNCAVMGC.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR015915	Kelch-typ_b-propeller
IPR001810	F-box_dom
IPR006652	Kelch_1

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Orthology

View orthology data for BolC9t58196H-R-P