BolC9t58185H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC9t58185H-R
Unique Name	BolC9t58185H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	772

Homology

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BLAST of BolC9t58185H-R vs. GenBank_protein
Match: VDD32862.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 1506 bits (3899), Expect = 0.000e+0
Identity = 771/771 (100.00%), Postives = 771/771 (100.00%), Query Frame = 0

Query:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH 771
            MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH
Sbjct:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH 771

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BLAST of BolC9t58185H-R vs. GenBank_protein
Match: CAF1772333.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 1464 bits (3789), Expect = 0.000e+0
Identity = 755/771 (97.92%), Postives = 757/771 (98.18%), Query Frame = 0

Query:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH 771
            MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXX ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYS PLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLP QELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR           WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQI+GFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALM+EASKSSSVSQPDSSPTGH
Sbjct:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXX-ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSSPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPLQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR-----------WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQIAGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMMEASKSSSVSQPDSSPTGH 759

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BLAST of BolC9t58185H-R vs. GenBank_protein
Match: XP_013612784.1 (PREDICTED: auxin response factor 4 isoform X2 [Brassica oleracea var. oleracea])

HSP 1 Score: 1460 bits (3780), Expect = 0.000e+0
Identity = 754/771 (97.80%), Postives = 756/771 (98.05%), Query Frame = 0

Query:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH 771
            MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXX ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYS PLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLP QELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR           WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERG FLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQI+GFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALM+EASKSSSVSQPDSSPTGH
Sbjct:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXX-ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSSPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPLQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR-----------WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGVFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQIAGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMMEASKSSSVSQPDSSPTGH 759

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BLAST of BolC9t58185H-R vs. GenBank_protein
Match: XP_013612786.1 (PREDICTED: auxin response factor 4 isoform X4 [Brassica oleracea var. oleracea])

HSP 1 Score: 1452 bits (3758), Expect = 0.000e+0
Identity = 754/782 (96.42%), Postives = 756/782 (96.68%), Query Frame = 0

Query:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFK-----------VNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH 771
            MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXX ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYS PLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLP QELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR           WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERG FLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQI+GFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFK           VNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALM+EASKSSSVSQPDSSPTGH
Sbjct:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXX-ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSSPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPLQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR-----------WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGVFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQIAGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKIDMMGTEKGREVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMMEASKSSSVSQPDSSPTGH 770

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BLAST of BolC9t58185H-R vs. GenBank_protein
Match: KAG2274618.1 (hypothetical protein Bca52824_057173 [Brassica carinata])

HSP 1 Score: 1449 bits (3751), Expect = 0.000e+0
Identity = 754/782 (96.42%), Postives = 756/782 (96.68%), Query Frame = 0

Query:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFK-----------VNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH 771
            MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXX ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYS PLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLP QELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR           WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPIT ERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQI+GFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFK           VNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALM+EASKSSSVSQPDSSPTGH
Sbjct:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXX-ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSSPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPLQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR-----------WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPIT-ERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQIAGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKIDMMGTEKGREVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMMEASKSSSVSQPDSSPTGH 769

[Close]

BLAST of BolC9t58185H-R vs. GenBank_protein
Match: XP_013612783.1 (PREDICTED: auxin response factor 4 isoform X1 [Brassica oleracea var. oleracea])

HSP 1 Score: 1446 bits (3742), Expect = 0.000e+0
Identity = 753/782 (96.29%), Postives = 755/782 (96.55%), Query Frame = 0

Query:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFK-----------VNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH 771
            MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXX ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYS PLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLP QELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR           WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPIT ERG FLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQI+GFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFK           VNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALM+EASKSSSVSQPDSSPTGH
Sbjct:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXX-ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSSPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPLQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR-----------WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPIT-ERGVFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQIAGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKIDMMGTEKGREVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMMEASKSSSVSQPDSSPTGH 769

[Close]

BLAST of BolC9t58185H-R vs. GenBank_protein
Match: XP_013612785.1 (PREDICTED: auxin response factor 4 isoform X3 [Brassica oleracea var. oleracea])

HSP 1 Score: 1429 bits (3699), Expect = 0.000e+0
Identity = 725/782 (92.71%), Postives = 727/782 (92.97%), Query Frame = 0

Query:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFK-----------VNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH 771
            MEFDLNTEFAEVEEEENDEGGGARVEK                              ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYS PLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLP QELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR           WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERG FLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQI+GFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFK           VNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALM+EASKSSSVSQPDSSPTGH
Sbjct:    1 MEFDLNTEFAEVEEEENDEGGGARVEKAS----------------------------ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSSPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPLQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR-----------WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGVFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQIAGFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSSRKFDAQREGGLPKNVPFKIDMMGTEKGREVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMMEASKSSSVSQPDSSPTGH 743

[Close]

BLAST of BolC9t58185H-R vs. GenBank_protein
Match: XP_018446640.1 (PREDICTED: auxin response factor 4 [Raphanus sativus] >XP_018446641.1 PREDICTED: auxin response factor 4 [Raphanus sativus] >XP_018446832.1 PREDICTED: auxin response factor 4-like [Raphanus sativus])

HSP 1 Score: 1337 bits (3459), Expect = 0.000e+0
Identity = 715/794 (90.05%), Postives = 733/794 (92.32%), Query Frame = 0

Query:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGS-ASSSP-LQGFDVMNRRILDFAGMQQSHANPVLLSG-RVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASASGSPN------PFAYQANKSSFYPLASQGIRSSHIPYQSPYNAG-DKS----SSRKFDAQREGGLPKNVPFK-----------VNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPT 769
            MEFDLNTEFAEVEEEENDEGGGAR+EKG RLGV PSSXXXXXXXXXXXXXXXXXX  ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQ  +V YS PLD+PKLDLSPQIFCRVA VHLLANKETDEVYTQVTLLP QELSMLNGEGKEV+E GGDEEKNGSSS+K+TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQK SSS+ILSLVANAV+NKSMF VFYSPRATH+EFVIPYEKYITSI+NPI IGTRFRMRFEMDDSPERRCAGVVTGVCD DPYRWPNSKWRCLLVR           WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPIT ERG FLDFEESVRPSKVLQGQEN GS ASSSP LQGFDVMNRRILDFA MQ SHANPVLLS  RVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQI+GFTPASASGSP+      PFAYQANKSSFYPLASQGIRSSHIP+Q+PYNAG DKS    S RKFDAQ EGGLPK+VPFK           VNMNAST GCKLFGFSLPVETPASN QSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFC+VVLKIHLYTKEEVENGNDDN+SCLEQAALM+EASKSSSVSQPDSSPT
Sbjct:    1 MEFDLNTEFAEVEEEENDEGGGARIEKG-RLGVSPSSXXXXXXXXXXXXXXXXXX--ASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQVALVPYSTPLDIPKLDLSPQIFCRVANVHLLANKETDEVYTQVTLLPLQELSMLNGEGKEVRESGGDEEKNGSSSIKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKSSSSNILSLVANAVTNKSMFHVFYSPRATHAEFVIPYEKYITSIRNPICIGTRFRMRFEMDDSPERRCAGVVTGVCDSDPYRWPNSKWRCLLVR-----------WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPIT-ERGVFLDFEESVRPSKVLQGQENIGSVASSSPSLQGFDVMNRRILDFAEMQ-SHANPVLLSSTRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQIAGFTPASASGSPSLGYTGGPFAYQANKSSFYPLASQGIRSSHIPFQNPYNAGGDKSLSHPSGRKFDAQSEGGLPKSVPFKIDVMGTEKGGDVNMNASTAGCKLFGFSLPVETPASNPQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVLKIHLYTKEEVENGNDDNKSCLEQAALMMEASKSSSVSQPDSSPT 778

[Close]

BLAST of BolC9t58185H-R vs. GenBank_protein
Match: XP_009120578.2 (auxin response factor 4 isoform X1 [Brassica rapa] >VDD18352.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 1335 bits (3454), Expect = 0.000e+0
Identity = 712/784 (90.82%), Postives = 721/784 (91.96%), Query Frame = 0

Query:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSA-SSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASAS-GSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKS----SSRKFDAQREGG-LPK------NVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH 771
            MEFDLNTEFAEVEEEEND        KGKRLGV    XXXXXXXXXXXXXXXXXX   SSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQG MVSYS PLD+PKLDLSPQIFCRVA VHLLANKETDEVYTQVTLLP QELS+LNGEGKEV+ELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMF VFYSPRATHSEFVIPYEKYITSIKNPI IGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR           WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQEN GSA SSSPLQGFDVMNRRILDFAGMQQSHANP+LLS RVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQI+G +P  AS G    FAYQANK+SFYPLASQGIRSSHIPYQS   AGDKS    SSRKFDAQ EGG LPK          +VNMNASTTGCKLFGFSLPV TPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALM+EASKSSSVSQPDSSPTGH
Sbjct:    1 MEFDLNTEFAEVEEEEND--------KGKRLGVXXXXXXXXXXXXXXXXXXXXXX---SSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGAMVSYSSPLDIPKLDLSPQIFCRVANVHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSIKNPICIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR-----------WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENIGSATSSSPLQGFDVMNRRILDFAGMQQSHANPLLLSSRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQIAGLSPGKASLGYNGAFAYQANKTSFYPLASQGIRSSHIPYQS---AGDKSLSHPSSRKFDAQGEGGGLPKIDMMGAEKGREVNMNASTTGCKLFGFSLPVGTPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMMEASKSSSVSQPDSSPTGH 759

[Close]

BLAST of BolC9t58185H-R vs. GenBank_protein
Match: XP_013667137.1 (auxin response factor 4 isoform X1 [Brassica napus] >CAF2336282.1 unnamed protein product [Brassica napus])

HSP 1 Score: 1333 bits (3451), Expect = 0.000e+0
Identity = 710/784 (90.56%), Postives = 720/784 (91.84%), Query Frame = 0

Query:    1 MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSXXXXXXXXXXXXXXXXXXXXASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYSFPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGEGKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENTGSA-SSSPLQGFDVMNRRILDFAGMQQSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQISGFTPASAS-GSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKS----SSRKFDAQRE-GGLPK------NVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMIEASKSSSVSQPDSSPTGH 771
            MEFDLNTEFAEVEEEEND        KGKRLGV    XXXXXXXXXXXXXXXXX    SSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQG MVSYS PLD+PKLDLSPQIFCRVA VHLLANKETDEVYTQVTLLP QELS+LNGEGKEV+ELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMF VFYSPRATHSEFVIPYEKYITSIKNPI IGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR           WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQEN GSA SSSPLQGFDVMNRRILDFAGMQQSHANP+LLS RVKDRFGEFVD+TSLDLDRFPRVLQGQEICSLRSFPQI+G +P  AS G    FAYQANK+SFYPLASQGIRSSHIPYQS   AGDKS    SSRKFDAQ E GGLPK          +VNMNASTTGCKLFGFSLPV TPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALM+EASKSSSVSQPDSSPTGH
Sbjct:    1 MEFDLNTEFAEVEEEEND--------KGKRLGVXXXXXXXXXXXXXXXXXXXXX----SSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGAMVSYSSPLDIPKLDLSPQIFCRVANVHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSLVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSIKNPICIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVR-----------WDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPITAERGGFLDFEESVRPSKVLQGQENIGSATSSSPLQGFDVMNRRILDFAGMQQSHANPLLLSSRVKDRFGEFVDTTSLDLDRFPRVLQGQEICSLRSFPQIAGLSPGKASLGYNGAFAYQANKTSFYPLASQGIRSSHIPYQS---AGDKSLSHPSSRKFDAQGEDGGLPKIDMMGTEKGREVNMNASTTGCKLFGFSLPVGTPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAALMMEASKSSSVSQPDSSPTGH 758

The following BLAST results are available for this feature:

BLAST of BolC9t58185H-R vs. GenBank_protein

BLAST of BolC9t58185H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDD32862.1	0.000e+0	100.00	unnamed protein product [Brassica oleracea]	[more]
CAF1772333.1	0.000e+0	97.92	unnamed protein product [Brassica napus]	[more]
XP_013612784.1	0.000e+0	97.80	PREDICTED: auxin response factor 4 isoform X2 [Bra...	[more]
XP_013612786.1	0.000e+0	96.42	PREDICTED: auxin response factor 4 isoform X4 [Bra...	[more]
KAG2274618.1	0.000e+0	96.42	hypothetical protein Bca52824_057173 [Brassica car...	[more]
XP_013612783.1	0.000e+0	96.29	PREDICTED: auxin response factor 4 isoform X1 [Bra...	[more]
XP_013612785.1	0.000e+0	92.71	PREDICTED: auxin response factor 4 isoform X3 [Bra...	[more]
XP_018446640.1	0.000e+0	90.05	PREDICTED: auxin response factor 4 [Raphanus sativ...	[more]
XP_009120578.2	0.000e+0	90.82	auxin response factor 4 isoform X1 [Brassica rapa]...	[more]
XP_013667137.1	0.000e+0	90.56	auxin response factor 4 isoform X1 [Brassica napus...	[more]

Pages

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009725	response to hormone
biological_process	GO:0010050	vegetative phase change
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0000976	transcription regulatory region sequence-specific DNA binding

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 176..278 e-value: 3.7E-23 score: 92.9
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 176..277 e-value: 2.3E-21 score: 75.5
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 176..278 score: 13.422457
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 174..276 e-value: 1.32747E-21 score: 88.1536
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 641..729 e-value: 1.2E-5 score: 25.4
None	No IPR available	GENE3D	2.30.30.1040		coord: 339..421 e-value: 1.3E-28 score: 100.2
None	No IPR available	GENE3D	3.10.20.90		coord: 645..738 e-value: 1.8E-27 score: 97.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..431
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR31384:SF105	AUXIN RESPONSE FACTOR	coord: 35..598
None	No IPR available	PANTHER	PTHR31384:SF105	AUXIN RESPONSE FACTOR	coord: 620..760
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 647..725
IPR010525	Auxin response factor domain	PFAM	PF06507	Auxin_resp	coord: 301..382 e-value: 2.0E-33 score: 114.5
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 174..277 e-value: 3.8E-46 score: 157.2
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 170..292
IPR044835	Auxin response factor	PANTHER	PTHR31384	AUXIN RESPONSE FACTOR 4-RELATED	coord: 35..598
IPR044835	Auxin response factor	PANTHER	PTHR31384	AUXIN RESPONSE FACTOR 4-RELATED	coord: 620..760
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 650..732 score: 22.181387

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C9	contig	C9:50366725..50370102 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC9t58185H-R	BolC9t58185H-R	Brassica oleracea HDEM	mRNA	C9 50366725..50370102 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC9t58185H-R-P ID=BolC9t58185H-R-P|Name=BolC9t58185H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=772bp
MEFDLNTEFAEVEEEENDEGGGARVEKGKRLGVLPSSSSSCSSRSSSSSS
SSSTTASASSIYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGVMVSYS
FPLDVPKLDLSPQIFCRVAAVHLLANKETDEVYTQVTLLPFQELSMLNGE
GKEVKELGGDEEKNGSSSVKKTPHMFCKTLTASDTSTHGGFSVPRRAAED
CFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVS
QKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSSSILSL
VANAVSNKSMFDVFYSPRATHSEFVIPYEKYITSIKNPIGIGTRFRMRFE
MDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRVLPHLFDVSVRWDES
FMSDHQERVSPWEIDPSGSLPPLSIQSSPRPKRPWAGLLGTTTPQGNPIT
AERGGFLDFEESVRPSKVLQGQENTGSASSSPLQGFDVMNRRILDFAGMQ
QSHANPVLLSGRVKDRFGEFVDSTSLDLDRFPRVLQGQEICSLRSFPQIS
GFTPASASGSPNPFAYQANKSSFYPLASQGIRSSHIPYQSPYNAGDKSSS
RKFDAQREGGLPKNVPFKVNMNASTTGCKLFGFSLPVETPASNQQSSSKR
ICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRI
LYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVENGNDDNRSCLEQAA
LMIEASKSSSVSQPDSSPTGH.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **Biological Process**
Term	Definition
GO:0009725	response to hormone
GO:0010158	abaxial cell fate specification
GO:0009734	auxin-activated signaling pathway
GO:0006355	regulation of transcription, DNA-templated
GO:0010050	vegetative phase change

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0000976	transcription regulatory region sequence-specific DNA binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000270	PB1_dom
IPR044835	ARF_plant
IPR015300	DNA-bd_pseudobarrel_sf
IPR010525	ARF_dom
IPR033389	AUX/IAA_dom
IPR003340	B3_DNA-bd

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Orthology

View orthology data for BolC9t58185H-R-P