BolC9t58000H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBolC9t58000H-R
Unique NameBolC9t58000H-R-P
Typepolypeptide
OrganismBrassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length36
Homology
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BLAST of BolC9t58000H-R vs. GenBank_protein
Match: VDD32677.1 (unnamed protein product, partial [Brassica oleracea])

HSP 1 Score: 79.0 bits (193), Expect = 1.880e-18
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:    1 AAKKTGRLAETHGSTVMTDSLFSDMIHNHREENCW 35
            AAKKTGRLAETHGSTVMTDSLFSDMIHNHREENCW
Sbjct:    1 AAKKTGRLAETHGSTVMTDSLFSDMIHNHREENCW 35
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BLAST of BolC9t58000H-R vs. GenBank_protein
Match: CDY08140.1 (BnaA06g15860D [Brassica napus])

HSP 1 Score: 57.4 bits (137), Expect = 8.630e-10
Identity = 28/46 (60.87%), Postives = 30/46 (65.22%), Query Frame = 0 
Query:    1 AAKKTGRLAETHGSTVMTD-----------SLFSDMIHNHREENCW 35
            +AKKTGR+AETHGSTV                FSDMIHNHREENCW
Sbjct:    3 SAKKTGRVAETHGSTVSFQRQKSTGEIFHGETFSDMIHNHREENCW 48
The following BLAST results are available for this feature:
BLAST of BolC9t58000H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 2
Match NameE-valueIdentityDescription
VDD32677.11.880e-18100.00unnamed protein product, partial [Brassica olerace... [more]
CDY08140.18.630e-1060.87BnaA06g15860D [Brassica napus][more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C9contigC9:48848597..48848972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-03-19
Diamond on OGS1.0 vs NR2022-03-19
Brassica oleracea HDEM OGS1.02018-11-02
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
BolC9t58000H-RBolC9t58000H-RBrassica oleracea HDEMmRNAC9 48848597..48848972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>BolC9t58000H-R-P ID=BolC9t58000H-R-P|Name=BolC9t58000H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=36bp
AAKKTGRLAETHGSTVMTDSLFSDMIHNHREENCW.
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