BolSC94t61271H-R-P (polypeptide) Brassica oleracea HDEM
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of BolSC94t61271H-R vs. GenBank_protein
Match: VDD66043.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 509 bits (1312), Expect = 3.340e-182 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0 Query: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPLYRAAVRTQSPKLEMIDSLFQPVDDPVNGDNANCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
MDVSHGSPGRADVPSVAAVLQHSYFSCPLYRAAVRTQSPKLEMIDSLFQPVDDPVNGDNANCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC
Sbjct: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPLYRAAVRTQSPKLEMIDSLFQPVDDPVNGDNANCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
BLAST of BolSC94t61271H-R vs. GenBank_protein
Match: KAG2332768.1 (hypothetical protein Bca52824_003948 [Brassica carinata]) HSP 1 Score: 455 bits (1170), Expect = 1.250e-155 Identity = 233/258 (90.31%), Postives = 239/258 (92.64%), Query Frame = 0 Query: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPL---YRAAVRTQSPKLEMIDSLFQPVDDPVNGDNA---NCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
MDVSHGSPGRADVPSVAAV+ + PL YRAAVR+QSPKLEMIDSLFQPVDDPVNGDN +EFF TSN RKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAG IGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFED+SEEKVPELPRLHE+VESNMFFC
Sbjct: 327 MDVSHGSPGRADVPSVAAVVGSKNW--PLISRYRAAVRSQSPKLEMIDSLFQPVDDPVNGDNGIMNELFVEFFNTSNGRKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGKIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDVSEEKVPELPRLHEKVESNMFFC 582
BLAST of BolSC94t61271H-R vs. GenBank_protein
Match: XP_013630625.1 (PREDICTED: protein argonaute 6 [Brassica oleracea var. oleracea]) HSP 1 Score: 462 bits (1190), Expect = 4.550e-155 Identity = 238/258 (92.25%), Postives = 242/258 (93.80%), Query Frame = 0 Query: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPL---YRAAVRTQSPKLEMIDSLFQPVDDPVNGDNA---NCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
MDVSHGSPGRADVPSVAAV+ + PL YRAAVRTQSPKLEMIDSLFQPV+DPVNGDN +EFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC
Sbjct: 606 MDVSHGSPGRADVPSVAAVVGSKNW--PLISRYRAAVRTQSPKLEMIDSLFQPVEDPVNGDNGIMNELFVEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 861
BLAST of BolSC94t61271H-R vs. GenBank_protein
Match: CAF1699792.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 462 bits (1190), Expect = 5.350e-155 Identity = 238/258 (92.25%), Postives = 242/258 (93.80%), Query Frame = 0 Query: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPL---YRAAVRTQSPKLEMIDSLFQPVDDPVNGDNA---NCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
MDVSHGSPGRADVPSVAAV+ + PL YRAAVRTQSPKLEMIDSLFQPV+DPVNGDN +EFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC
Sbjct: 612 MDVSHGSPGRADVPSVAAVVGSKNW--PLISRYRAAVRTQSPKLEMIDSLFQPVEDPVNGDNGIMNELFVEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 867
BLAST of BolSC94t61271H-R vs. GenBank_protein
Match: XP_018472619.1 (PREDICTED: protein argonaute 6 [Raphanus sativus]) HSP 1 Score: 462 bits (1189), Expect = 7.550e-155 Identity = 237/258 (91.86%), Postives = 242/258 (93.80%), Query Frame = 0 Query: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPL---YRAAVRTQSPKLEMIDSLFQPVDDPVNGDNA---NCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
MDVSHGSPGRADVPSVAAV+ + PL YRAAVR+QSPKLEMIDSLFQPVDDPVNGDN +EFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFED+SEEKVPELPRLHERVESNMFFC
Sbjct: 612 MDVSHGSPGRADVPSVAAVVGSKNW--PLISRYRAAVRSQSPKLEMIDSLFQPVDDPVNGDNGIMNELFVEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDVSEEKVPELPRLHERVESNMFFC 867
BLAST of BolSC94t61271H-R vs. GenBank_protein
Match: KAG2296674.1 (hypothetical protein Bca52824_043343 [Brassica carinata]) HSP 1 Score: 462 bits (1189), Expect = 9.370e-155 Identity = 237/258 (91.86%), Postives = 242/258 (93.80%), Query Frame = 0 Query: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPL---YRAAVRTQSPKLEMIDSLFQPVDDPVNGDNA---NCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
MDVSHGSPGRADVPS+AAV+ + PL YRAAVRTQSPKLEMIDSLFQPV+DPVNGDN +EFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC
Sbjct: 620 MDVSHGSPGRADVPSIAAVVGSKNW--PLISRYRAAVRTQSPKLEMIDSLFQPVEDPVNGDNGIMNELFVEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 875
BLAST of BolSC94t61271H-R vs. GenBank_protein
Match: KAF8105240.1 (hypothetical protein N665_0161s0038 [Sinapis alba]) HSP 1 Score: 461 bits (1187), Expect = 1.470e-154 Identity = 237/258 (91.86%), Postives = 242/258 (93.80%), Query Frame = 0 Query: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPL---YRAAVRTQSPKLEMIDSLFQPVDDPVNGDNA---NCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
MDVSHGSPGRADVPSVAAV+ + PL YRAAVR+QSPKLEMIDSLFQPVDDPVNGDN +EFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPD+LQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC
Sbjct: 611 MDVSHGSPGRADVPSVAAVVGSKNW--PLISRYRAAVRSQSPKLEMIDSLFQPVDDPVNGDNGIMNELFVEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 866
BLAST of BolSC94t61271H-R vs. GenBank_protein
Match: XP_009132895.1 (protein argonaute 6 isoform X2 [Brassica rapa] >XP_009132896.1 protein argonaute 6 isoform X2 [Brassica rapa] >XP_013734203.1 protein argonaute 6-like [Brassica napus] >XP_013734204.1 protein argonaute 6-like [Brassica napus] >RID69596.1 hypothetical protein BRARA_C01682 [Brassica rapa] >VDC79888.1 unnamed protein product [Brassica rapa]) HSP 1 Score: 461 bits (1187), Expect = 1.510e-154 Identity = 236/258 (91.47%), Postives = 242/258 (93.80%), Query Frame = 0 Query: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPL---YRAAVRTQSPKLEMIDSLFQPVDDPVNGDNA---NCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
MDVSHGSPGRADVPS+AAV+ + PL YRAAVRTQSPK+EMIDSLFQPV+DPVNGDN +EFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC
Sbjct: 612 MDVSHGSPGRADVPSIAAVVGSKNW--PLISRYRAAVRTQSPKMEMIDSLFQPVEDPVNGDNGIMNELFVEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 867
BLAST of BolSC94t61271H-R vs. GenBank_protein
Match: XP_033143065.1 (protein argonaute 6 isoform X1 [Brassica rapa]) HSP 1 Score: 461 bits (1187), Expect = 5.110e-154 Identity = 236/258 (91.47%), Postives = 242/258 (93.80%), Query Frame = 0 Query: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPL---YRAAVRTQSPKLEMIDSLFQPVDDPVNGDNA---NCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
MDVSHGSPGRADVPS+AAV+ + PL YRAAVRTQSPK+EMIDSLFQPV+DPVNGDN +EFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC
Sbjct: 658 MDVSHGSPGRADVPSIAAVVGSKNW--PLISRYRAAVRTQSPKMEMIDSLFQPVEDPVNGDNGIMNELFVEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 913
BLAST of BolSC94t61271H-R vs. GenBank_protein
Match: XP_013683431.1 (protein argonaute 6-like isoform X1 [Brassica napus]) HSP 1 Score: 458 bits (1179), Expect = 2.390e-153 Identity = 235/258 (91.09%), Postives = 241/258 (93.41%), Query Frame = 0 Query: 1 MDVSHGSPGRADVPSVAAVLQHSYFSCPL---YRAAVRTQSPKLEMIDSLFQPVDDPVNGDNA---NCLLEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDISEEKVPELPRLHERVESNMFFC 252
MDVSHGSPGRADVPSVAAV+ + PL YRAAVRTQSPK+EMIDSLFQPV+DPVNGDN +EFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFED+SEEKVPELPRL ERVESNMFFC
Sbjct: 612 MDVSHGSPGRADVPSVAAVVGSKNW--PLISRYRAAVRTQSPKMEMIDSLFQPVEDPVNGDNGIMNELFVEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAYQRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGIIGTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFTKFEDVSEEKVPELPRLQERVESNMFFC 867 The following BLAST results are available for this feature:
BLAST of BolSC94t61271H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolSC94t61271H-R-P ID=BolSC94t61271H-R-P|Name=BolSC94t61271H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=253bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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