BolSC46t61043H-R-P (polypeptide) Brassica oleracea HDEM
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of BolSC46t61043H-R vs. GenBank_protein
Match: VDD65764.1 (unnamed protein product [Brassica oleracea] >VDD65815.1 unnamed protein product [Brassica oleracea] >VDD65890.1 unnamed protein product [Brassica oleracea]) HSP 1 Score: 143 bits (361), Expect = 4.000e-43 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 Query: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDANDDRNGCRLNLKEIMRKHYRIIMKLCD 69 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDANDDRNGCRLNLKEIMRKHYRIIMKLCD Sbjct: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDANDDRNGCRLNLKEIMRKHYRIIMKLCD 69
BLAST of BolSC46t61043H-R vs. GenBank_protein
Match: VDD30493.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 116 bits (291), Expect = 2.870e-32 Identity = 59/73 (80.82%), Postives = 63/73 (86.30%), Query Frame = 0 Query: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDANDDRNGCRLNLKEI----MRKHYRIIMKLCD 69 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDANDDRNGCRLNLKEI ++ +Y I+ D Sbjct: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDANDDRNGCRLNLKEIILEALQNYYEAILLEID 73
BLAST of BolSC46t61043H-R vs. GenBank_protein
Match: THU43575.1 (hypothetical protein C4D60_Mb00t09630 [Musa balbisiana] >CAG1865790.1 unnamed protein product [Musa acuminata subsp. malaccensis] >CAG1865860.1 unnamed protein product [Musa acuminata subsp. malaccensis]) HSP 1 Score: 106 bits (264), Expect = 4.220e-28 Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0 Query: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDAN----DDRNGCRLNLKEIMRKHYRIIMKLCD 69 MPRSRIN NFIDKT +IVA+ILLR+IPTTSGEK+AFTYYRD + +DRNGC LN KEIMRK YRIIMKL D Sbjct: 1 MPRSRINANFIDKTSSIVANILLRIIPTTSGEKKAFTYYRDDSLNRMNDRNGCWLNPKEIMRKLYRIIMKLRD 73
BLAST of BolSC46t61043H-R vs. GenBank_protein
Match: VDD22447.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 103 bits (258), Expect = 4.740e-27 Identity = 52/55 (94.55%), Postives = 52/55 (94.55%), Query Frame = 0 Query: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDANDDRNGCRLNLKE 55 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDANDDRNGC LN E Sbjct: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDANDDRNGC-LNQSE 54
BLAST of BolSC46t61043H-R vs. GenBank_protein
Match: ABN15092.1 (ycf3, partial [Brassica napus]) HSP 1 Score: 85.5 bits (210), Expect = 2.260e-20 Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0 Query: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRD 41 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRD Sbjct: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRD 41
BLAST of BolSC46t61043H-R vs. GenBank_protein
Match: GAV92932.1 (hypothetical protein CFOL_v3_36310, partial [Cephalotus follicularis]) HSP 1 Score: 85.9 bits (211), Expect = 2.520e-20 Identity = 40/44 (90.91%), Postives = 44/44 (100.00%), Query Frame = 0 Query: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDAND 44 MPRSRINGNFIDKTF+IVA+ILLR+IPTTSGEKEAFTYYRDA+D Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDASD 44
BLAST of BolSC46t61043H-R vs. GenBank_protein
Match: KAF8100559.1 (hypothetical protein N665_0221s0036 [Sinapis alba]) HSP 1 Score: 87.8 bits (216), Expect = 5.580e-20 Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 0 Query: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDAN 43 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRD N Sbjct: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDGN 43
BLAST of BolSC46t61043H-R vs. GenBank_protein
Match: AAN87746.1 (photosystem I assembly protein Ycf3, partial [Arabidopsis suecica] >AAN87761.1 photosystem I assembly protein Ycf3, partial [Arabidopsis thaliana] >AAN87747.1 photosystem I assembly protein Ycf3, partial [Arabidopsis suecica] >AAN87748.1 photosystem I assembly protein Ycf3, partial [Arabidopsis suecica] >AAN87749.1 photosystem I assembly protein Ycf3, partial [Arabidopsis suecica]) HSP 1 Score: 83.2 bits (204), Expect = 1.830e-19 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0 Query: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYR 40 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYR Sbjct: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYR 40
BLAST of BolSC46t61043H-R vs. GenBank_protein
Match: RYR38654.1 (hypothetical protein Ahy_A09g043783 isoform A [Arachis hypogaea]) HSP 1 Score: 83.2 bits (204), Expect = 1.980e-19 Identity = 39/42 (92.86%), Postives = 42/42 (100.00%), Query Frame = 0 Query: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDA 42 MPRSRINGNFIDKTF+IVA+ILLR+IPTTSGEKEAFTYYRDA Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDA 42
BLAST of BolSC46t61043H-R vs. GenBank_protein
Match: KAF1855869.1 (hypothetical protein Lal_00028288 [Lupinus albus] >KAF1876852.1 hypothetical protein Lal_00033143 [Lupinus albus]) HSP 1 Score: 83.2 bits (204), Expect = 2.880e-19 Identity = 39/42 (92.86%), Postives = 42/42 (100.00%), Query Frame = 0 Query: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDA 42 MPRSRINGNFIDKTF+IVA+ILLR+IPTTSGEKEAFTYYRDA Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDA 42 The following BLAST results are available for this feature:
BLAST of BolSC46t61043H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolSC46t61043H-R-P ID=BolSC46t61043H-R-P|Name=BolSC46t61043H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=70bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|