BolC9t59047H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC9t59047H-R
Unique Name	BolC9t59047H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	277

Homology

[Close]

BLAST of BolC9t59047H-R vs. GenBank_protein
Match: VDD33724.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 535 bits (1378), Expect = 1.860e-191
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0

Query:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276
            MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276

[Close]

BLAST of BolC9t59047H-R vs. GenBank_protein
Match: KAG2273903.1 (hypothetical protein Bca52824_056458 [Brassica carinata])

HSP 1 Score: 533 bits (1373), Expect = 1.070e-190
Identity = 275/276 (99.64%), Postives = 275/276 (99.64%), Query Frame = 0

Query:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276
            MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLI SLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLIASLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276

[Close]

BLAST of BolC9t59047H-R vs. GenBank_protein
Match: XP_013606965.1 (PREDICTED: mitochondrial outer membrane protein porin 3-like [Brassica oleracea var. oleracea] >XP_013681361.1 mitochondrial outer membrane protein porin 3-like [Brassica napus] >XP_013681362.1 mitochondrial outer membrane protein porin 3-like [Brassica napus] >XP_022568217.1 mitochondrial outer membrane protein porin 3-like [Brassica napus] >CDY59668.1 BnaCnng35410D [Brassica napus])

HSP 1 Score: 530 bits (1365), Expect = 1.780e-189
Identity = 273/276 (98.91%), Postives = 274/276 (99.28%), Query Frame = 0

Query:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276
            MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGV+ITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTES NFKHFNAGVSFTKDDLI SLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVSITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESGNFKHFNAGVSFTKDDLIASLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276

[Close]

BLAST of BolC9t59047H-R vs. GenBank_protein
Match: NP_001288856.1 (mitochondrial outer membrane protein porin 3-like [Brassica rapa] >AAS21632.1 voltage-dependent anion-selective channel protein [Brassica rapa])

HSP 1 Score: 520 bits (1340), Expect = 1.150e-185
Identity = 266/276 (96.38%), Postives = 269/276 (97.46%), Query Frame = 0

Query:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276
            MGKGPGLYTEIGKKARDLLYKDYQGDQKLSIT YSSTGV ITTSGTNKGDLF+GDV TQ+KNKNFTADIKVASDSSILTTFTYDEATPGLK IVSAKVPDQKSAKVELQY+HPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTES NFKHFN GVSFTKDDLI SLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITAYSSTGVAITTSGTNKGDLFLGDVVTQIKNKNFTADIKVASDSSILTTFTYDEATPGLKAIVSAKVPDQKSAKVELQYMHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESGNFKHFNTGVSFTKDDLIASLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276

[Close]

BLAST of BolC9t59047H-R vs. GenBank_protein
Match: KAF8106227.1 (hypothetical protein N665_0145s0041 [Sinapis alba])

HSP 1 Score: 520 bits (1339), Expect = 1.630e-185
Identity = 266/276 (96.38%), Postives = 271/276 (98.19%), Query Frame = 0

Query:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276
            MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGV ITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLK IVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTES NFKHFNAGVSFTKDDLI SLTLNDKGE+LNASYYHIVNPLKNTVVGAEV+HN+KSQVNSITVG QHALDPLT+VKARVNNAGIANALIQHEWRPKSFITISGEVDS+AIEKSAKVGFALALKP
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVAITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKAIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESGNFKHFNAGVSFTKDDLIASLTLNDKGERLNASYYHIVNPLKNTVVGAEVNHNMKSQVNSITVGAQHALDPLTSVKARVNNAGIANALIQHEWRPKSFITISGEVDSRAIEKSAKVGFALALKP 276

[Close]

BLAST of BolC9t59047H-R vs. GenBank_protein
Match: XP_013667720.1 (mitochondrial outer membrane protein porin 3 [Brassica napus] >AAS48868.1 voltage-dependent anion-selective channel [Brassica rapa subsp. pekinensis] >RID42067.1 hypothetical protein BRARA_J01983 [Brassica rapa] >CDY69321.1 BnaA10g29750D [Brassica napus])

HSP 1 Score: 520 bits (1339), Expect = 1.630e-185
Identity = 266/276 (96.38%), Postives = 269/276 (97.46%), Query Frame = 0

Query:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276
            MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGV ITTSGTNKGDLF+GDV TQ+KNKNFTADIKVASDSSILTTFTYDEATPGLK IVSAKVPDQKSAKVELQY+HPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTES NFKHFN GVSFTKDDLI SLTLNDKGEKL ASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVAITTSGTNKGDLFLGDVVTQIKNKNFTADIKVASDSSILTTFTYDEATPGLKAIVSAKVPDQKSAKVELQYMHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESGNFKHFNTGVSFTKDDLIASLTLNDKGEKLTASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276

[Close]

BLAST of BolC9t59047H-R vs. GenBank_protein
Match: VDD19536.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 518 bits (1335), Expect = 6.660e-185
Identity = 266/276 (96.38%), Postives = 268/276 (97.10%), Query Frame = 0

Query:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276
            MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGV ITTSGTNKGDLF+GDV TQ+KNKN TADIKVASDSSILTTFTYDEATPGLK IVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTES NFKHFN GVSFTKDDLI SLTLNDKGEKL ASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVAITTSGTNKGDLFLGDVVTQIKNKNLTADIKVASDSSILTTFTYDEATPGLKAIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESGNFKHFNTGVSFTKDDLIASLTLNDKGEKLTASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276

[Close]

BLAST of BolC9t59047H-R vs. GenBank_protein
Match: CAF1783844.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 530 bits (1365), Expect = 2.260e-184
Identity = 273/276 (98.91%), Postives = 274/276 (99.28%), Query Frame = 0

Query:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276
            MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGV+ITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTES NFKHFNAGVSFTKDDLI SLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP
Sbjct:  335 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVSITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESGNFKHFNAGVSFTKDDLIASLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 610

[Close]

BLAST of BolC9t59047H-R vs. GenBank_protein
Match: KAG2300456.1 (hypothetical protein Bca52824_036928 [Brassica carinata])

HSP 1 Score: 513 bits (1322), Expect = 6.380e-183
Identity = 262/276 (94.93%), Postives = 268/276 (97.10%), Query Frame = 0

Query:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276
            MGKGPGLYTEIGKKARDLLYKDYQGDQKL+ITTYSSTGV ITTSGTNKGDLFVGDV TQVKNKN TADIKVASDSSILTTFTYDEATPGLK IVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTES NFKHFNAGVSFTKDDLI SLTLNDKGE++NASYYHIVNPLKNTVVGAEV+HNLKSQVN+ITVG QHALDPLTTVK RVNNAGIANALIQHEWRPKSFITISGEVDS+AIEKSAKVGFALALKP
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLTITTYSSTGVAITTSGTNKGDLFVGDVTTQVKNKNLTADIKVASDSSILTTFTYDEATPGLKAIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESGNFKHFNAGVSFTKDDLIASLTLNDKGERVNASYYHIVNPLKNTVVGAEVNHNLKSQVNTITVGAQHALDPLTTVKTRVNNAGIANALIQHEWRPKSFITISGEVDSRAIEKSAKVGFALALKP 276

[Close]

BLAST of BolC9t59047H-R vs. GenBank_protein
Match: XP_018444859.1 (PREDICTED: mitochondrial outer membrane protein porin 3-like [Raphanus sativus])

HSP 1 Score: 508 bits (1309), Expect = 6.110e-181
Identity = 260/276 (94.20%), Postives = 267/276 (96.74%), Query Frame = 0

Query:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVTITTSGTNKGDLFVGDVATQVKNKNFTADIKVASDSSILTTFTYDEATPGLKTIVSAKVPDQKSAKVELQYLHPHAGICTSVGLTANPVVNFSGVIGTSVLALGTDVSFDTESSNFKHFNAGVSFTKDDLITSLTLNDKGEKLNASYYHIVNPLKNTVVGAEVSHNLKSQVNSITVGTQHALDPLTTVKARVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276
            MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGV ITT+GTNKGDLFVGDV TQ+KNKN TADIKVASDSSILTT TYDEATPGLK I+SAKVPDQKSAKVELQYLHPHAGICTSVGLTA+PVVNFSGVIGTSVLALGTDVSFDTES NFKHFNAGVSFTKDDLI SLTLNDKGEKLNASYYHIVNPLKNTVVGAEV+H+LKSQVN+ITVG QHALDPLTTVK RVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQGDQKLSITTYSSTGVAITTTGTNKGDLFVGDVLTQIKNKNLTADIKVASDSSILTTVTYDEATPGLKAILSAKVPDQKSAKVELQYLHPHAGICTSVGLTASPVVNFSGVIGTSVLALGTDVSFDTESGNFKHFNAGVSFTKDDLIASLTLNDKGEKLNASYYHIVNPLKNTVVGAEVTHSLKSQVNTITVGAQHALDPLTTVKTRVNNAGIANALIQHEWRPKSFITISGEVDSKAIEKSAKVGFALALKP 276

The following BLAST results are available for this feature:

BLAST of BolC9t59047H-R vs. GenBank_protein

BLAST of BolC9t59047H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
VDD33724.1	1.860e-191	100.00	unnamed protein product [Brassica oleracea]	[more]
KAG2273903.1	1.070e-190	99.64	hypothetical protein Bca52824_056458 [Brassica car...	[more]
XP_013606965.1	1.780e-189	98.91	PREDICTED: mitochondrial outer membrane protein po...	[more]
NP_001288856.1	1.150e-185	96.38	mitochondrial outer membrane protein porin 3-like ...	[more]
KAF8106227.1	1.630e-185	96.38	hypothetical protein N665_0145s0041 [Sinapis alba]	[more]
XP_013667720.1	1.630e-185	96.38	mitochondrial outer membrane protein porin 3 [Bras...	[more]
VDD19536.1	6.660e-185	96.38	unnamed protein product [Brassica rapa]	[more]
CAF1783844.1	2.260e-184	98.91	unnamed protein product [Brassica napus]	[more]
KAG2300456.1	6.380e-183	94.93	hypothetical protein Bca52824_036928 [Brassica car...	[more]
XP_018444859.1	6.110e-181	94.20	PREDICTED: mitochondrial outer membrane protein po...	[more]

ZOOM

x 1

POSITION

0

Pages

ZOOM

x 1

POSITION

0