BolC9t58876H-R-P (polypeptide) Brassica oleracea HDEM
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of BolC9t58876H-R vs. GenBank_protein
Match: VDD33553.1 (unnamed protein product, partial [Brassica oleracea]) HSP 1 Score: 364 bits (934), Expect = 6.210e-127 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 Query: 1 DQFATYRTWPCSYLSLAYWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPPRARPSHSPLLTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVNILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLRRETLLLIP 181 DQFATYRTWPCSYLSLAYWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPPRARPSHSPLLTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVNILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLRRETLLLIP Sbjct: 1 DQFATYRTWPCSYLSLAYWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPPRARPSHSPLLTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVNILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLRRETLLLIP 181
BLAST of BolC9t58876H-R vs. GenBank_protein
Match: CDY68229.1 (BnaUnng02800D [Brassica napus]) HSP 1 Score: 273 bits (697), Expect = 1.520e-90 Identity = 138/159 (86.79%), Postives = 145/159 (91.19%), Query Frame = 0 Query: 18 YWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPP-RARPSHSPLLTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVNILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLRRE 175 YWHLWKN+NRLVFE KSCT QEL+LKAL DARNWEEATQ EKRT PP R RP+ SP+L GLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALA+NILSDSKSL NL+NSS TALLQSVLFDIRVLSC+LDSITFSFV R E Sbjct: 19 YWHLWKNRNRLVFEGKSCTVQELILKALTDARNWEEATQMEKRTSPPLRVRPALSPMLPGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAINILSDSKSLVNLLNSSTSTALLQSVLFDIRVLSCRLDSITFSFVPRLE 177
BLAST of BolC9t58876H-R vs. GenBank_protein
Match: VDC84836.1 (unnamed protein product, partial [Brassica rapa]) HSP 1 Score: 260 bits (664), Expect = 1.420e-81 Identity = 138/174 (79.31%), Postives = 144/174 (82.76%), Query Frame = 0 Query: 18 YWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPP-RARPSHSPLLTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAV---------------NILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLRRE 175 YWHLWKN+NRLVFE KSCT QEL+LKAL DARNWEEATQ EKRT PP R RP+ SP+L GLRCYTDGAWDPVSGHSGQGWAFID TGATIRHQSCNRLHVAAPIVAEALAV NILSDSKSL NL+NSS TALLQSVLFDIRVLSC+LDSITFSFV R E Sbjct: 303 YWHLWKNRNRLVFEGKSCTVQELILKALTDARNWEEATQMEKRTSPPLRVRPALSPMLPGLRCYTDGAWDPVSGHSGQGWAFIDSTGATIRHQSCNRLHVAAPIVAEALAVKAALIDAVSNDFSQINILSDSKSLVNLLNSSTSTALLQSVLFDIRVLSCRLDSITFSFVPRLE 476
BLAST of BolC9t58876H-R vs. GenBank_protein
Match: VDD61051.1 (unnamed protein product, partial [Brassica oleracea]) HSP 1 Score: 233 bits (595), Expect = 1.210e-75 Identity = 122/146 (83.56%), Postives = 128/146 (87.67%), Query Frame = 0 Query: 28 LVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPPRARPSHSPLLTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVNILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLR 173 + F+DKSCTEQELVLKALKDARNWEEAT+ K P P LTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVA+PIVAEALAVNILSDSKSL NL+NSSA TALLQSVLFDIRVLSC+LDSITFSFV R Sbjct: 1 IAFKDKSCTEQELVLKALKDARNWEEATRDGKSAALPSQDVLLIPPLTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVASPIVAEALAVNILSDSKSLVNLLNSSASTALLQSVLFDIRVLSCRLDSITFSFVPR 146
BLAST of BolC9t58876H-R vs. GenBank_protein
Match: VDD34100.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 196 bits (497), Expect = 3.220e-60 Identity = 103/163 (63.19%), Postives = 120/163 (73.62%), Query Frame = 0 Query: 16 LAYWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRT-----CPPRARPSHSPLLTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVNILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLR 173 L YWHLWK +N L+FED+ CTE ELVLK LKDAR WEEA+QT K + C RPS S GL C+TDGAWDP SG+SGQGW F DP+ ++H S NR HVAAPIVAEALA+NI SDSKSL NL+NSS+ T LLQSVLFDIR LS + +S++F F R Sbjct: 11 LLYWHLWKARNMLIFEDRPCTEAELVLKVLKDARAWEEASQTNKLSVTRLPCQALVRPSPS----GLHCFTDGAWDPNSGNSGQGWVFFDPSVVELKHHSSNRRHVAAPIVAEALALNIFSDSKSLINLLNSSSSTVLLQSVLFDIRALSARFESVSFYFTPR 169
BLAST of BolC9t58876H-R vs. GenBank_protein
Match: CDY71581.1 (BnaCnng73520D [Brassica napus]) HSP 1 Score: 194 bits (494), Expect = 9.870e-59 Identity = 99/159 (62.26%), Postives = 119/159 (74.84%), Query Frame = 0 Query: 18 YWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPPRARPSHSPL---LTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVNILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLR 173 YWHLWK +N L+FEDKS TE ELVLK LKDARNWEEA + K CP P + + GL C+TDGAWDP+SGHSG GW F P+G ++H S NR HVAAPIVAEAL +N+ SDSKSL +L+NSS+ T LLQS++FDIRVL C+ +SI+FSFV R Sbjct: 90 YWHLWKARNMLIFEDKSWTEAELVLKVLKDARNWEEAYRGTK--CPHTHTPRKATVPQSARGLSCFTDGAWDPISGHSGHGWVFSTPSGVELKHHSSNRRHVAAPIVAEALELNVFSDSKSLIHLLNSSSSTVLLQSIMFDIRVLCCRFESISFSFVPR 246
BLAST of BolC9t58876H-R vs. GenBank_protein
Match: KAF2542128.1 (hypothetical protein F2Q68_00031038 [Brassica cretica]) HSP 1 Score: 187 bits (474), Expect = 3.650e-56 Identity = 103/174 (59.20%), Postives = 120/174 (68.97%), Query Frame = 0 Query: 18 YWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPPRARPSHSPLL-TGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVN---------------ILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLRRE 175 YWHLWKN+NRL+F+DK TE EL+L+ LKD R WEEA+QTEK R PL TGLRC+TDGAWDP S +SGQGW F D G +RH S NRLHVAAPIVAEALAV +LSDSKSL NL+NSS+ T LL SVLFDIRVLSC+ DSI++ + R + Sbjct: 40 YWHLWKNRNRLLFKDKYYTESELLLRVLKDVRCWEEASQTEKSGRLTNTRSPPPPLPPTGLRCFTDGAWDPASRNSGQGWVFTDLAGVEVRHHSGNRLHVAAPIVAEALAVKAALLDAVNHDFSQVIVLSDSKSLVNLLNSSSSTVLLHSVLFDIRVLSCRFDSISYFHIPRLQ 213
BLAST of BolC9t58876H-R vs. GenBank_protein
Match: VDD60473.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 184 bits (468), Expect = 8.340e-55 Identity = 96/159 (60.38%), Postives = 116/159 (72.96%), Query Frame = 0 Query: 18 YWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPPRARPSHSPL---LTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVNILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLR 173 YWHLWK +N L+FEDKS TE ELVLK LKDARNWEEA + K CP P + + GL C+TDGAWDP+ GHSG GW F P+G ++H S NR HVAAPIVAEALA+N+ SD KSL +L+NSS+ T LLQS++FDIRVL + + I+FSFV R Sbjct: 90 YWHLWKARNILIFEDKSWTEAELVLKVLKDARNWEEAYRGTK--CPHTHTPRKATVPQSARGLSCFTDGAWDPIFGHSGHGWVFSTPSGVELKHHSSNRRHVAAPIVAEALALNVFSDLKSLIHLLNSSSSTVLLQSIMFDIRVLCFRFEFISFSFVPR 246
BLAST of BolC9t58876H-R vs. GenBank_protein
Match: CDY23622.1 (BnaC05g39720D [Brassica napus]) HSP 1 Score: 173 bits (439), Expect = 1.390e-51 Identity = 94/156 (60.26%), Postives = 109/156 (69.87%), Query Frame = 0 Query: 18 YWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPPRARPSHSPLLTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVNILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLR 173 YWHLWKN+NRLVFE KSCTE ELV KALKDAR+WEEA+Q++ + P AR PL G Q W F+DP+G + H S NRLHVAAPIVAEALAVN+ SD KSL NL+NSS+ T LLQSVL DIRVLSC+ D I+FS+V R Sbjct: 19 YWHLWKNRNRLVFEGKSCTETELVTKALKDARSWEEASQSDNTSHSPHARSFPPPLRIG-----------------QVWTFVDPSGVKVHHHSTNRLHVAAPIVAEALAVNVFSDLKSLVNLLNSSSSTVLLQSVLLDIRVLSCRFDYISFSYVPR 157
BLAST of BolC9t58876H-R vs. GenBank_protein
Match: VDD46545.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 169 bits (429), Expect = 4.280e-50 Identity = 92/156 (58.97%), Postives = 107/156 (68.59%), Query Frame = 0 Query: 18 YWHLWKNQNRLVFEDKSCTEQELVLKALKDARNWEEATQTEKRTCPPRARPSHSPLLTGLRCYTDGAWDPVSGHSGQGWAFIDPTGATIRHQSCNRLHVAAPIVAEALAVNILSDSKSLFNLINSSALTALLQSVLFDIRVLSCKLDSITFSFVLR 173 YWHLWKN+NRLVFE KSCTE ELV KALKDAR+WEEA+Q++ + P AR P G W F+DP+G + H S NRLHVAAPIVAEALAVN+ SD KSL NL+NSS+ T LLQSVL DIRVLSC+ D I+FS+V R Sbjct: 19 YWHLWKNRNRLVFEGKSCTETELVTKALKDARSWEEASQSDNTSHSPHARSFPPPPPNG-------------------WTFVDPSGVKVHHHSTNRLHVAAPIVAEALAVNVFSDLKSLVNLLNSSSSTVLLQSVLLDIRVLSCRFDYISFSYVPR 155 The following BLAST results are available for this feature:
BLAST of BolC9t58876H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC9t58876H-R-P ID=BolC9t58876H-R-P|Name=BolC9t58876H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=182bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Orthology
View orthology data for BolC9t58876H-R-P
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