BolC9t58426H-R-P (polypeptide) Brassica oleracea HDEM
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of BolC9t58426H-R vs. GenBank_protein
Match: VDD33103.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 466 bits (1198), Expect = 3.440e-165 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0 Query: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDPHKRIFNDCSILERNAGTLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPKA 241
MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDPHKRIFNDCSILERNAGTLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPKA
Sbjct: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDPHKRIFNDCSILERNAGTLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPKA 241
BLAST of BolC9t58426H-R vs. GenBank_protein
Match: XP_022547828.1 (putative nuclease HARBI1 [Brassica napus]) HSP 1 Score: 345 bits (884), Expect = 9.530e-116 Identity = 200/297 (67.34%), Postives = 208/297 (70.03%), Query Frame = 0 Query: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDP------------HKRIFN------DCS------------------------ILERNA--------------GTLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPKA 241
MSSSSSD+VDER XXXXX ESQ NKQ+R AYIERNRE GHDRLWNDYFSEHSTFSAHLFR RFRM+KDLFLRIVVSLS+NIPFF QRRDATGRSGLSPLQKC AAIRQLAYGSAADA DEYLRLGESTALSCLHHFT GII LFG+EYLR P KR F DC +LE A GTLNDINVLDRSPVFDDIF+GRAP VEYVVN H YNLAYYLTDGIYPKW+TFIQSI PQGPKA
Sbjct: 1 MSSSSSDNVDERXXXXXXXXXXXXXNDIVESQPNKQKRRAYIERNREVGHDRLWNDYFSEHSTFSAHLFRRRFRMSKDLFLRIVVSLSDNIPFFTQRRDATGRSGLSPLQKCTAAIRQLAYGSAADAADEYLRLGESTALSCLHHFTAGIIHLFGEEYLRRPTAEDLQRLLDIGEKRGFPGMVGSIDCMHWEWKNCPTAWKGQYARGSGKPTIVLEAVASQDLWIWHAFFGPPGTLNDINVLDRSPVFDDIFEGRAPMVEYVVNGHNYNLAYYLTDGIYPKWATFIQSITSPQGPKA 297
BLAST of BolC9t58426H-R vs. GenBank_protein
Match: XP_009150828.2 (putative nuclease HARBI1 [Brassica rapa]) HSP 1 Score: 342 bits (876), Expect = 1.580e-113 Identity = 199/297 (67.00%), Postives = 207/297 (69.70%), Query Frame = 0 Query: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDP------------HKRIFN------DCS------------------------ILERNA--------------GTLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPKA 241
MSSSSSD+VDER XXXXX ESQ NKQ+R AY+ERNRE GHDRLWNDYFSEHSTF AHLFR RFRM+KDLFLRIVV+LSENI FF QRRDATGRSGLSPLQKC AAI QLAYGSAADA DEYLRLGESTALSCLHHFTDGIIQLFG EYLR P KR F DC +LE A GTLNDINVLDRSPVFDDIF+GRAPTVEYVVN H YNLAYYLTDGIYPKW+TFIQSI PQGPKA
Sbjct: 1 MSSSSSDNVDERXXXXXXXXXXXXXNDIVESQPNKQKRRAYVERNREVGHDRLWNDYFSEHSTFLAHLFRRRFRMSKDLFLRIVVTLSENIRFFTQRRDATGRSGLSPLQKCTAAICQLAYGSAADAADEYLRLGESTALSCLHHFTDGIIQLFGKEYLRRPTPEDLQRLLDIGEKRGFPGMVGSIDCMHWEWKNCPTAWKGQYARGSGKPTIVLEAVASQDLWIWHAFFGPPGTLNDINVLDRSPVFDDIFEGRAPTVEYVVNGHNYNLAYYLTDGIYPKWATFIQSITSPQGPKA 297
BLAST of BolC9t58426H-R vs. GenBank_protein
Match: VDD61108.1 (unnamed protein product, partial [Brassica oleracea]) HSP 1 Score: 333 bits (854), Expect = 1.210e-111 Identity = 174/251 (69.32%), Postives = 191/251 (76.10%), Query Frame = 0 Query: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDPHKRIFNDCSILERNAG----------TLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPKA 241
MSSSSSD+++ERL +FD+I E+QT+KQR+ AYIERN EAGH+ LWNDYFSE STF AHLFR RFRM K+LF RIV LSE++PFFRQRRDATGR GLSPLQKC AAIR LAYGSAADAVDEYLRLGEST +SCL F +GIIQLFGDEYLR P + + G TLNDINVLDRSP FDD+ QGRAP VEYVVN H YNLAYYLTDGIYPKWSTFIQ I PQGPKA
Sbjct: 1 MSSSSSDELEERLNGVFDDILEDTYNNIVEAQTSKQRKQAYIERNNEAGHNHLWNDYFSEDSTFPAHLFRRRFRMKKELFNRIVHRLSEHVPFFRQRRDATGRPGLSPLQKCTAAIRLLAYGSAADAVDEYLRLGESTLISCLQQFNEGIIQLFGDEYLRRPTPKDLQPLLDIGEKRGFPGMAGSIDCTLNDINVLDRSPFFDDVLQGRAPRVEYVVNGHMYNLAYYLTDGIYPKWSTFIQLISLPQGPKA 251
BLAST of BolC9t58426H-R vs. GenBank_protein
Match: XP_033140579.1 (putative nuclease HARBI1 isoform X2 [Brassica rapa]) HSP 1 Score: 332 bits (850), Expect = 1.600e-109 Identity = 181/297 (60.94%), Postives = 206/297 (69.36%), Query Frame = 0 Query: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDPH----KRIFN--------------DCS------------------------ILERNA--------------GTLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPKA 241
MSSSSSD ++ERL+E+FD+I E+QT KQ++ AYIERNREAGH+RLWNDYF+E+ T+ AH FR RFRMNK+LF+RIV LS+N+PFF+QRRDATGR GLSPLQKC AAIR LAYGSAADAVDEYLRLGESTALSCLH+FTDGII LFG+EYLR P +R+ + DC +LE A GTLNDINVLDRSPVFDDI +GRAP +EYVVN HKY AYYLTDGIYPKWSTFIQSI PQGPKA
Sbjct: 1 MSSSSSDGLEERLDEVFDDICEDTFNDILEAQTKKQKKRAYIERNREAGHNRLWNDYFTENPTYEAHFFRRRFRMNKELFMRIVYGLSQNVPFFQQRRDATGRLGLSPLQKCTAAIRMLAYGSAADAVDEYLRLGESTALSCLHNFTDGIIHLFGNEYLRRPTAEDLQRLLDIGETRGFPGMVGSIDCMHWEWKNCPTSWKGQYARGSSKPTIVLEAVASQDLWIWHAFFGPPGTLNDINVLDRSPVFDDIIEGRAPRLEYVVNGHKYKFAYYLTDGIYPKWSTFIQSITLPQGPKA 297
BLAST of BolC9t58426H-R vs. GenBank_protein
Match: XP_022573481.1 (putative nuclease HARBI1 [Brassica napus] >XP_022573482.1 putative nuclease HARBI1 [Brassica napus]) HSP 1 Score: 332 bits (850), Expect = 1.600e-109 Identity = 181/297 (60.94%), Postives = 206/297 (69.36%), Query Frame = 0 Query: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDPH----KRIFN--------------DCS------------------------ILERNA--------------GTLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPKA 241
MSSSSSD ++ERL+E+FD+I E+QT KQ++ AYIERNREAGH+RLWNDYF+E+ T+ AH FR RFRMNK+LF+RIV LS+N+PFF+QRRDATGR GLSPLQKC AAIR LAYGSAADAVDEYLRLGESTALSCLH+FTDGII LFG+EYLR P +R+ + DC +LE A GTLNDINVLDRSPVFDDI +GRAP +EYVVN HKY AYYLTDGIYPKWSTFIQSI PQGPKA
Sbjct: 1 MSSSSSDGLEERLDEVFDDICEDTFNDILEAQTKKQKKRAYIERNREAGHNRLWNDYFTENPTYEAHFFRRRFRMNKELFMRIVYGLSQNVPFFQQRRDATGRLGLSPLQKCTAAIRMLAYGSAADAVDEYLRLGESTALSCLHNFTDGIIHLFGNEYLRRPTAEDLQRLLDIGETRGFPGMVGSIDCMHWEWKNCPTSWKGQYARGSSKPTIVLEAVASQDLWIWHAFFGPPGTLNDINVLDRSPVFDDIIEGRAPRLEYVVNGHKYKFAYYLTDGIYPKWSTFIQSITLPQGPKA 297
BLAST of BolC9t58426H-R vs. GenBank_protein
Match: XP_022547181.1 (putative nuclease HARBI1 [Brassica napus]) HSP 1 Score: 332 bits (850), Expect = 1.600e-109 Identity = 181/297 (60.94%), Postives = 206/297 (69.36%), Query Frame = 0 Query: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDPH----KRIFN--------------DCS------------------------ILERNA--------------GTLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPKA 241
MSSSSSD ++ERL+E+FD+I E+QT KQ++ AYIERNREAGH+RLWNDYF+E+ T+ AH FR RFRMNK+LF+RIV LS+N+PFF+QRRDATGR GLSPLQKC AAIR LAYGSAADAVDEYLRLGESTALSCLH+FTDGII LFG+EYLR P +R+ + DC +LE A GTLNDINVLDRSPVFDDI +GRAP +EYVVN HKY AYYLTDGIYPKWSTFIQSI PQGPKA
Sbjct: 1 MSSSSSDGLEERLDEVFDDICEDTFNDILEAQTKKQKKRAYIERNREAGHNRLWNDYFTENPTYEAHFFRRRFRMNKELFMRIVYGLSQNVPFFQQRRDATGRLGLSPLQKCTAAIRMLAYGSAADAVDEYLRLGESTALSCLHNFTDGIIHLFGNEYLRRPTAEDLQRLLDIGETRRFPGMVGSIDCMHWEWKNCPTSWKGQYAHGSSKPTIVLEAVASQDLWIWHAFFGPPGTLNDINVLDRSPVFDDIIEGRAPRLEYVVNGHKYKFAYYLTDGIYPKWSTFIQSITLPQGPKA 297
BLAST of BolC9t58426H-R vs. GenBank_protein
Match: XP_033133434.1 (uncharacterized protein LOC117127387 [Brassica rapa]) HSP 1 Score: 323 bits (828), Expect = 3.920e-108 Identity = 186/266 (69.92%), Postives = 199/266 (74.81%), Query Frame = 0 Query: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDP------------HKRIF-------NDCSILER------NAGTLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPKA 241
MSSSSSD V ERL+E+ XXXXXXX E+QT+K R+ YIERNREAGHDRLWNDYFSE STFS +LFR RFRMNK+LFLRIV LSEN+PFFRQRRDA GR GLSPLQKC AAIR L Y S AD VDEYLRLGESTALSCLHHFTDGII LFG+EYL+ P KR F C R TLNDINVLDRSPV DDIFQGRAP ++YVVNR+ Y LAYYLTDGIYPKWSTFIQSI HPQGPKA
Sbjct: 1 MSSSSSDGVKERLDELXXXXXXXXXXXIVEAQTSKHRK-RYIERNREAGHDRLWNDYFSEDSTFSTYLFRRRFRMNKELFLRIVHGLSENVPFFRQRRDAAGRFGLSPLQKCTAAIRLLTYSSTADTVDEYLRLGESTALSCLHHFTDGIIGLFGEEYLQRPTPEDLQRLLDIGEKRRFPGMVGSMTACIGSGRIVQPLGKDSTLNDINVLDRSPVVDDIFQGRAPRLKYVVNRNLYKLAYYLTDGIYPKWSTFIQSISHPQGPKA 265
BLAST of BolC9t58426H-R vs. GenBank_protein
Match: XP_033146133.1 (putative nuclease HARBI1 [Brassica rapa]) HSP 1 Score: 323 bits (829), Expect = 2.130e-106 Identity = 189/296 (63.85%), Postives = 203/296 (68.58%), Query Frame = 0 Query: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDP------------HKRIFN------DCS------------------------ILERNA--------------GTLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPK 240
MSSSSSD V+ERL EIF XXXXXX E+QT+K ++ AYIERNREAGHDRLWNDYFSE TFSAHLFR RFRMNK+LFLRIV LSENIPFFR++RDATGRSGLSPLQKC AAIR LAYG AAD VD+YLRLGE+TALSCLHHFTDGII LFG+EYLR P KR F DC +LE GTLNDINVLDRSPVFDDI +GRAP V+YVVN H Y L YYLTDGIYPKWSTFIQSI PQ PK
Sbjct: 1 MSSSSSDGVEERLNEIFXXXXXXXXXDIVEAQTSKDKKRAYIERNREAGHDRLWNDYFSEDPTFSAHLFRRRFRMNKELFLRIVHGLSENIPFFRKKRDATGRSGLSPLQKCTAAIRLLAYGCAADTVDKYLRLGETTALSCLHHFTDGIIGLFGEEYLRRPTPEDLQRLLDIGEKRGFPGMVGSIDCMHWEWKNCPTAWKGQYARGSGKPTIVLEAVTSHDLWIWHAFVGPPGTLNDINVLDRSPVFDDILEGRAPRVKYVVNEHTYKLVYYLTDGIYPKWSTFIQSITLPQSPK 296
BLAST of BolC9t58426H-R vs. GenBank_protein
Match: XP_013610211.1 (PREDICTED: uncharacterized protein LOC106316892 [Brassica oleracea var. oleracea]) HSP 1 Score: 314 bits (804), Expect = 8.310e-104 Identity = 176/296 (59.46%), Postives = 193/296 (65.20%), Query Frame = 0 Query: 1 MSSSSSDDVDERLEEIFDEIXXXXXXXXXESQTNKQRRHAYIERNREAGHDRLWNDYFSEHSTFSAHLFRHRFRMNKDLFLRIVVSLSENIPFFRQRRDATGRSGLSPLQKCMAAIRQLAYGSAADAVDEYLRLGESTALSCLHHFTDGIIQLFGDEYLRDPHKRIFN------------------DCS------------------------ILERNAG--------------TLNDINVLDRSPVFDDIFQGRAPTVEYVVNRHKYNLAYYLTDGIYPKWSTFIQSIMHPQGPK 240
MSSSSSD V+ERL+EI D+I ESQ KQR+ AYIER+RE GH+RLWNDYFSE +TF HLFR FRMNKDLFLRI LSEN+PFF+QRRDATGR GLSPL KC AAIR LAYG+AADAVDEYLR+GESTA+ CL HF +GII+LFGDEYLR P F DC +LE A TLNDINVLDRSPVFDDI QGRAP VEY+VNRH YNLAYYLT+GIYP WSTFIQSI PQG K
Sbjct: 1 MSSSSSDGVEERLDEIIDDIIDETYINIVESQPKKQRKRAYIERDRELGHNRLWNDYFSEDATFPTHLFRRHFRMNKDLFLRIAYRLSENVPFFQQRRDATGRFGLSPLHKCTAAIRLLAYGNAADAVDEYLRIGESTAIFCLEHFNEGIIRLFGDEYLRRPTAEDFERLLHIGEIRGFSGMVGSIDCMHCRWKNCPTAWKGQYTRGSTKPSIVLEAVASQDLWIWHVFFGLPCTLNDINVLDRSPVFDDIIQGRAPRVEYMVNRHIYNLAYYLTNGIYPNWSTFIQSISLPQGLK 296 The following BLAST results are available for this feature:
BLAST of BolC9t58426H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC9t58426H-R-P ID=BolC9t58426H-R-P|Name=BolC9t58426H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=242bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Orthology
View orthology data for BolC9t58426H-R-P
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