BolC9t58262H-R-P (polypeptide) Brassica oleracea HDEM
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of BolC9t58262H-R vs. GenBank_protein
Match: VDD32939.1 (unnamed protein product, partial [Brassica oleracea]) HSP 1 Score: 210 bits (534), Expect = 3.550e-68 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 Query: 1 KSVPLAAGSRSRVTTAEPQKQPNQQGKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 112 KSVPLAAGSRSRVTTAEPQKQPNQQGKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI Sbjct: 1 KSVPLAAGSRSRVTTAEPQKQPNQQGKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 112
BLAST of BolC9t58262H-R vs. GenBank_protein
Match: CAF2112599.1 (unnamed protein product, partial [Brassica napus] >VDD57680.1 unnamed protein product, partial [Brassica oleracea]) HSP 1 Score: 187 bits (476), Expect = 2.660e-59 Identity = 101/112 (90.18%), Postives = 103/112 (91.96%), Query Frame = 0 Query: 1 KSVPLAAGSRSRVTTAEPQKQPNQQGKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 112 K+ P AA VTTAEP KQPNQQGKN+NQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHI KFLPSFSGTPHI Sbjct: 3 KAYPSAAWIPILVTTAEPHKQPNQQGKNVNQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIFKFLPSFSGTPHI 114
BLAST of BolC9t58262H-R vs. GenBank_protein
Match: CDY26950.1 (BnaC09g36330D [Brassica napus]) HSP 1 Score: 168 bits (426), Expect = 7.650e-52 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0 Query: 25 QGKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 112 QGKN+NQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI Sbjct: 15 QGKNVNQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 102
BLAST of BolC9t58262H-R vs. GenBank_protein
Match: CAF2061188.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 163 bits (413), Expect = 1.250e-49 Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 0 Query: 25 QGKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 112 Q K++NQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI Sbjct: 32 QEKSVNQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 119
BLAST of BolC9t58262H-R vs. GenBank_protein
Match: CAF1773656.1 (unnamed protein product, partial [Brassica napus]) HSP 1 Score: 142 bits (359), Expect = 1.010e-41 Identity = 84/112 (75.00%), Postives = 86/112 (76.79%), Query Frame = 0 Query: 1 KSVPLAAGSRSRVTTAEPQKQPNQQGKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 112 K+ P AA VTTAEPQKQPNQQGKN+NQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEK FLPSFSGTPHI Sbjct: 3 KAYPSAAWIPILVTTAEPQKQPNQQGKNVNQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEK-------------------FLPSFSGTPHI 95
BLAST of BolC9t58262H-R vs. GenBank_protein
Match: CDY44505.1 (BnaC01g10440D [Brassica napus]) HSP 1 Score: 142 bits (359), Expect = 1.040e-41 Identity = 84/112 (75.00%), Postives = 86/112 (76.79%), Query Frame = 0 Query: 1 KSVPLAAGSRSRVTTAEPQKQPNQQGKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 112 K+ P AA VTTAEPQKQPNQQGKN+NQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEK FLPSFSGTPHI Sbjct: 4 KAYPSAAWIPILVTTAEPQKQPNQQGKNVNQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEK-------------------FLPSFSGTPHI 96
BLAST of BolC9t58262H-R vs. GenBank_protein
Match: CAF2069491.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 141 bits (355), Expect = 4.220e-41 Identity = 83/112 (74.11%), Postives = 85/112 (75.89%), Query Frame = 0 Query: 1 KSVPLAAGSRSRVTTAEPQKQPNQQGKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 112 K+ P AA VTTAEPQKQPNQQGKN+NQQNVNQRRSPDD EREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEK FLPSFSGTPHI Sbjct: 4 KAYPSAAWIPILVTTAEPQKQPNQQGKNVNQQNVNQRRSPDDVEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEK-------------------FLPSFSGTPHI 96
BLAST of BolC9t58262H-R vs. GenBank_protein
Match: VDD63006.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 122 bits (305), Expect = 5.840e-33 Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0 Query: 25 QGKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVIV 93 Q K++NQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHV V Sbjct: 32 QEKSVNQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEKVRIQSPFHVAV 100
BLAST of BolC9t58262H-R vs. GenBank_protein
Match: KAG2258544.1 (hypothetical protein Bca52824_077838 [Brassica carinata]) HSP 1 Score: 107 bits (266), Expect = 5.690e-27 Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0 Query: 26 GKNINQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEK 82 GKN+NQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEK Sbjct: 30 GKNVNQQNVNQRRSPDDAEREAREMVLSQILFSHSLERKCLEDVILRAAQMEQIVEK 86
BLAST of BolC9t58262H-R vs. GenBank_protein
Match: CAF1715535.1 (unnamed protein product, partial [Brassica napus]) HSP 1 Score: 85.5 bits (210), Expect = 1.420e-19 Identity = 42/48 (87.50%), Postives = 43/48 (89.58%), Query Frame = 0 Query: 65 CLEDVILRAAQMEQIVEKVRIQSPFHVIVHHFFHIIKFLPSFSGTPHI 112 CLEDV LRAAQMEQIVEKVRIQSPF VIVHH HIIKF+PSFSG PHI Sbjct: 3 CLEDVFLRAAQMEQIVEKVRIQSPFQVIVHHSLHIIKFIPSFSGAPHI 50 The following BLAST results are available for this feature:
BLAST of BolC9t58262H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 14 ZOOMx 1POSITION0
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC9t58262H-R-P ID=BolC9t58262H-R-P|Name=BolC9t58262H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=113bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Orthology
View orthology data for BolC9t58262H-R-P
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