BolC1t00210H-R-P (polypeptide) Brassica oleracea HDEM
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of BolC1t00210H-R vs. GenBank_protein
Match: CAF2067433.1 (unnamed protein product [Brassica napus] >VDD47821.1 unnamed protein product [Brassica oleracea]) HSP 1 Score: 490 bits (1262), Expect = 1.300e-174 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0 Query: 1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG Sbjct: 1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_013604880.1 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic [Brassica oleracea var. oleracea]) HSP 1 Score: 488 bits (1257), Expect = 7.520e-174 Identity = 250/251 (99.60%), Postives = 250/251 (99.60%), Query Frame = 0 Query: 1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQA PESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG Sbjct: 1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQANPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_009140776.1 (thioredoxin-like protein HCF164, chloroplastic [Brassica rapa] >KAG5412615.1 hypothetical protein IGI04_000182 [Brassica rapa subsp. trilocularis] >RID77253.1 hypothetical protein BRARA_A00181 [Brassica rapa]) HSP 1 Score: 481 bits (1237), Expect = 8.730e-171 Identity = 247/252 (98.02%), Postives = 251/252 (99.60%), Query Frame = 0 Query: 1 MAAARLVFSLS-LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251 MAA+RLVFSLS LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATP+SSEPQEKLVVDNGST+ETSPA+KEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG Sbjct: 1 MAASRLVFSLSRLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPDSSEPQEKLVVDNGSTNETSPASKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 252
BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_013738380.1 (thioredoxin-like protein HCF164, chloroplastic [Brassica napus] >CAF2146554.1 unnamed protein product [Brassica napus] >VDC73686.1 unnamed protein product [Brassica rapa]) HSP 1 Score: 480 bits (1236), Expect = 1.240e-170 Identity = 248/252 (98.41%), Postives = 250/252 (99.21%), Query Frame = 0 Query: 1 MAAARLVFSLS-LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251 MAAA LVFSLS LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATP+SSEPQEKLVVDNGSTSETSPA+KEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG Sbjct: 1 MAAAGLVFSLSRLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPDSSEPQEKLVVDNGSTSETSPASKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 252
BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_013732487.1 (thioredoxin-like protein HCF164, chloroplastic [Brassica napus]) HSP 1 Score: 476 bits (1224), Expect = 8.370e-169 Identity = 246/252 (97.62%), Postives = 248/252 (98.41%), Query Frame = 0 Query: 1 MAAARLVFSLS-LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251 MAAARLVFSLS LPSSTHGINRKFQPFLL QTVAP RVRALRCQATPESSEPQEKLVVD+ STSETSPA+KEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG Sbjct: 1 MAAARLVFSLSRLPSSTHGINRKFQPFLLAQTVAPYRVRALRCQATPESSEPQEKLVVDDSSTSETSPASKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 252
BLAST of BolC1t00210H-R vs. GenBank_protein
Match: KAF2543146.1 (hypothetical protein F2Q68_00028712 [Brassica cretica]) HSP 1 Score: 473 bits (1216), Expect = 1.240e-167 Identity = 246/252 (97.62%), Postives = 247/252 (98.02%), Query Frame = 0 Query: 1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETS-PATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVR CQ+TPESSEPQEKLVVDNGSTSETS PATKE SSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG Sbjct: 1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVR---CQSTPESSEPQEKLVVDNGSTSETSSPATKETSSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 249
BLAST of BolC1t00210H-R vs. GenBank_protein
Match: KAF3530111.1 (hypothetical protein DY000_02036394 [Brassica cretica]) HSP 1 Score: 471 bits (1213), Expect = 3.570e-167 Identity = 246/252 (97.62%), Postives = 246/252 (97.62%), Query Frame = 0 Query: 1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETS-PATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVR CQATPESSEPQEKLVVDNGSTSETS PATKE S GFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG Sbjct: 1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVR---CQATPESSEPQEKLVVDNGSTSETSSPATKETSYGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 249
BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_018456588.1 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic [Raphanus sativus] >XP_018456764.1 PREDICTED: thioredoxin-like protein HCF164, chloroplastic [Raphanus sativus]) HSP 1 Score: 436 bits (1120), Expect = 7.910e-153 Identity = 230/260 (88.46%), Postives = 235/260 (90.38%), Query Frame = 0 Query: 1 MAAARLVFSLSLPSSTH-GINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEA--------SSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251 M AA LVFSL + S+ H GINR FQPFLLTQT AP R RALRCQA ESSEP+EKLVVDNGSTSE SPA+K A SS FPESPN D+NRRVAV SVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG Sbjct: 1 MMAAPLVFSLRILSTPHHGINRNFQPFLLTQTGAPPRYRALRCQANSESSEPKEKLVVDNGSTSEISPASKVAEPSPSSSSSSAFPESPNSDINRRVAVGSVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 260
BLAST of BolC1t00210H-R vs. GenBank_protein
Match: KAF8098959.1 (hypothetical protein N665_0255s0035 [Sinapis alba]) HSP 1 Score: 433 bits (1114), Expect = 4.870e-152 Identity = 231/255 (90.59%), Postives = 236/255 (92.55%), Query Frame = 0 Query: 3 AARLVFSLS-LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSP-----ATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251 AARLVFSLS LPS GINR +QPFLLTQT AP RVRALRCQA PESSEPQEKLVVDNGSTSE ++ +SSGFPESPNRDVNRRVA ASV+AALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG Sbjct: 2 AARLVFSLSSLPS---GINRNYQPFLLTQTGAP-RVRALRCQANPESSEPQEKLVVDNGSTSEIPKVAEPSSSSSSSSGFPESPNRDVNRRVAAASVIAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 252
BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_006411947.1 (thioredoxin-like protein HCF164, chloroplastic [Eutrema salsugineum] >ESQ53400.1 hypothetical protein EUTSA_v10026051mg [Eutrema salsugineum]) HSP 1 Score: 410 bits (1053), Expect = 1.030e-142 Identity = 217/255 (85.10%), Postives = 230/255 (90.20%), Query Frame = 0 Query: 4 ARLVFSLSLPSSTHGIN---RKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSET----SPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251 ARLVFSL+L SS+HG N RK+Q FLLTQT AP R RALRCQA PESSE QEKLVVD+ ST E S +SSGFPESPNRD+NRRVA SV+AALALFLSTRLDFGISLKDLTA+ALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDR+GNEEGNVVGRLPRQYLVENVNALA+GK+SIP+ARAVGQYSSAE+RKVHQVTDPLSHG Sbjct: 2 ARLVFSLNL-SSSHGFNLSPRKYQTFLLTQTGAP-RSRALRCQANPESSETQEKLVVDDSSTGEIKEVESSQASSSSSGFPESPNRDINRRVAATSVIAALALFLSTRLDFGISLKDLTAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLVENVNALASGKKSIPYARAVGQYSSAESRKVHQVTDPLSHG 254 The following BLAST results are available for this feature:
BLAST of BolC1t00210H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC1t00210H-R-P ID=BolC1t00210H-R-P|Name=BolC1t00210H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=252bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Orthology
View orthology data for BolC1t00210H-R-P
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