Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Cds size | 1470 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC9t58668H | BolC9t58668H | Brassica oleracea HDEM | gene | C9 54125784..54127784 - |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC9t58668H | BolC9t58668H | Brassica oleracea HDEM | CDS | C9 54125784..54125897 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BolC9t58668H-R ID=BolC9t58668H-R|Name=BolC9t58668H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1470bp|location=Sequence derived from alignment at C9:54125784..54127784- (Brassica oleracea HDEM)|Notes=Excludes all bases but those of type(s): exon.
ATGGGATCTGGTTTAAACGATGCATTATCTAGGAAGTACAGCGGTTTGGA
GCTCTGGGAGATCATAGTGATTGTTCTCTCTGCAATATTCGTTTTAGTGT
TAGCTATATCGTTATGGCTTACTTTCAGAAGAAGAAACTCTAGATCTTCT
TCTTCTAATCAGATCCCTGTTAGCCACCAGCTTCCTCCTACTGTCTCCGA
AGAGATTAAAGAGATTAGAGTCGACGAGGTTTCCTCAAGCAACGGTGGTG
GTGGCAATGGATATCCTTCCATTAGCGAGAAATTTGGGCACAAAGAGACT
GAAAAAGGGATAGTAGTAGCAGATTCAGAGAATGGTGGAGATAGTAGCAG
GTCAGGATCGTTTAATCACTTGGAGAAGAAAGATGGTTCGAGCGTATCTT
CTGCTAATCCTATGACGGCTCCGTCTCCTTTATCTGGCCTTCCTGAGTTT
TCTCACCTCGGATGGGGGCATTGGTTTACTCTCAGAGATCTTCAGATGGC
TACGAACCAGTTCTCGAGGGATAATATAATTGGTGATGGTGGGTATGGAG
TTGTGTACCGTGGTAACCTTGTTAATGGTTCTCCTGTTGCCGTCAAAAAG
TTGCTCAACAATCTAGGACAAGCTGACAAAGACTTCAGAGTAGAGGTTGA
AGCTATAGGTCATGTTCGCCACAAAAACTTGGTCCGTCTTCTTGGATATT
GCATGGAAGGAACGCAGAGGATGCTGGTGTATGAGTATGTTAACAACGGA
AACTTGGAGCAATGGCTACGTGGAGACAATCAAAACCACGAGTATCTAAC
ATGGGAGGCACGGCTAAAGATTCTTATTGGAACAGCCAAAGCGCTTGCGT
ACCTTCACGAGGCGATTGAGCCAAAAGTGGTGCACAGAGACATAAAGTCG
AGCAACATTCTGATTGATGACAAATTCAATTCTAAAATTTCTGACTTTGG
ACTTGCCAAGCTGCTTGGTGCTGATAAAAGTTTTATAACTACTAGAGTTA
TGGGTACCTTTGGTTATGTAGCTCCAGAGTATGCGAACTCTGGTCTTCTG
AATGAGAAAAGTGATGTCTATAGCTTTGGTGTTGTACTATTGGAAGCTAT
AACTGGTAGATATCCTGTAGACTATGCTCGCCCACCACCTGAGGTGCATT
TGGTGGAATGGCTAAAGATGATGGTCCAACAGAGACGATCAGAAGAAGTG
ATTGACCCAAACCTCAATACGAAACCATCTACCAGTGCCTTAAAAAGAAC
ACTCTTGACTGCTTTGAGATGTGTTGATCCCATGTCTGAGAAACGACCAA
GGATGAGCCAAGTTGCACGTATGCTTGAATCAGAGGAGTACCCAATTCCT
AGAGAGGATAGAAGAAGACGAAAGAGTGAGAATGGACCAACAAGAGAGTC
AGATCCTCCTAGGAACAGCACAGACACTGACAAGAGCGAGTTCCAAGACC
AAAAGCCTGAAGCTGGATAA back to topprotein sequence of BolC9t58668H-R >BolC9t58668H-R-P ID=BolC9t58668H-R-P|Name=BolC9t58668H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=490bp
MGSGLNDALSRKYSGLELWEIIVIVLSAIFVLVLAISLWLTFRRRNSRSS
SSNQIPVSHQLPPTVSEEIKEIRVDEVSSSNGGGGNGYPSISEKFGHKET
EKGIVVADSENGGDSSRSGSFNHLEKKDGSSVSSANPMTAPSPLSGLPEF
SHLGWGHWFTLRDLQMATNQFSRDNIIGDGGYGVVYRGNLVNGSPVAVKK
LLNNLGQADKDFRVEVEAIGHVRHKNLVRLLGYCMEGTQRMLVYEYVNNG
NLEQWLRGDNQNHEYLTWEARLKILIGTAKALAYLHEAIEPKVVHRDIKS
SNILIDDKFNSKISDFGLAKLLGADKSFITTRVMGTFGYVAPEYANSGLL
NEKSDVYSFGVVLLEAITGRYPVDYARPPPEVHLVEWLKMMVQQRRSEEV
IDPNLNTKPSTSALKRTLLTALRCVDPMSEKRPRMSQVARMLESEEYPIP
REDRRRRKSENGPTRESDPPRNSTDTDKSEFQDQKPEAG. back to topmRNA from alignment at C9:54125784..54127784- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >BolC9t58668H-R ID=BolC9t58668H-R|Name=BolC9t58668H-R|organism=Brassica oleracea HDEM|type=mRNA|length=2001bp|location=Sequence derived from alignment at C9:54125784..54127784- (Brassica oleracea HDEM)
ATGGGATCTGGTTTAAACGATGCATTATCTAGGAAGTACAGCGGTTTGGA
GCTCTGGGAGATCATAGTGATTGTTCTCTCTGCAATATTCGTTTTAGTGT
TAGCTATATCGTTATGGCTTACTTTCAGAAGAAGAAACTCTAGATCTTCT
TCTTCTAATCAGATCCCTGTTAGCCACCAGCTTCCTCCTACTGTCTCCGA
AGAGATTAAAGAGATTAGAGTCGACGAGGTTTCCTCAAGCAACGGTGGTG
GTGGCAATGGATATCCTTCCATTAGCGAGAAATTTGGGCACAAAGAGACT
GAAAAAGGGATAGTAGTAGCAGATTCAGAGAATGGTGGAGATAGTAGCAG
GTCAGGATCGTTTAATCACTTGGAGAAGAAAGATGGTTCGAGCGTATCTT
CTGCTAATCCTATGACGGCTCCGTCTCCTTTATCTGGCCTTCCTGAGTTT
TCTCACCTCGGATGGGGGCATTGGTTTACTCTCAGAGATCTTCAGATGGC
TACGAACCAGTTCTCGAGGGATAATATAATTGGTGATGGTGGGTATGGAG
TTGTGTACCGTGGTAACCTTGTTAATGGTTCTCCTGTTGCCGTCAAAAAG
TTGCTCAACAATCTGTAAGTGAAATCAAGATTCAAGATTTTCATTTCCTG
AATTTCGTTTTTTTTTTGTAATGTTGATGTTTTGGGTGTTTGTAGAGGAC
AAGCTGACAAAGACTTCAGAGTAGAGGTTGAAGCTATAGGTCATGTTCGC
CACAAAAACTTGGTCCGTCTTCTTGGATATTGCATGGAAGGAACGCAGAG
GTATGTGTATGTTCTGCTGTTAAATGATTCCTTTTTGAACTTCACTGAAC
ATTGGATGTGGTGACACTTGATTAGGATGCTGGTGTATGAGTATGTTAAC
AACGGAAACTTGGAGCAATGGCTACGTGGAGACAATCAAAACCACGAGTA
TCTAACATGGGAGGCACGGCTAAAGATTCTTATTGGAACAGCCAAAGCGT
AAGACTTGTTATGGTTACGGTTTCTTCTTTATTTTTGTTTGTTTATCTTC
TTCATCTGAGGCAAATGGGGTGGTGATGCAGGCTTGCGTACCTTCACGAG
GCGATTGAGCCAAAAGTGGTGCACAGAGACATAAAGTCGAGCAACATTCT
GATTGATGACAAATTCAATTCTAAAATTTCTGACTTTGGACTTGCCAAGC
TGCTTGGTGCTGATAAAAGTTTTATAACTACTAGAGTTATGGGTACCTTT
GGGTAAGTAACTGTGGTGGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCAATACACTCTTCACTTAATAAATGTGAAGACGTTAACTTGT
TTCTTTTTTCACTTTTCAGTTATGTAGCTCCAGAGTATGCGAACTCTGGT
CTTCTGAATGAGAAAAGTGATGTCTATAGCTTTGGTGTTGTACTATTGGA
AGCTATAACTGGTAGATATCCTGTAGACTATGCTCGCCCACCACCTGAGG
TATATAATCCCTTAAGTTTGTTAAAAGAAGCCTTCAGACACACACATCAA
CTCTGCTCACTTTTTGTAGGTGCATTTGGTGGAATGGCTAAAGATGATGG
TCCAACAGAGACGATCAGAAGAAGTGATTGACCCAAACCTCAATACGAAA
CCATCTACCAGTGCCTTAAAAAGAACACTCTTGACTGCTTTGAGATGTGT
TGATCCCATGTCTGAGAAACGACCAAGGATGAGCCAAGTTGCACGTATGC
TTGAATCAGAGGAGTACCCAATTCCTAGAGAGGTATGAACAAAGGAAAAG
ATCACAGCTTCGAAAACTGCTTCTTATTTTTATCGGTCTGATAGATCTTT
TGGTTGCTAAAAGCTCTAACGACTTTGAGAATTTTAGGATAGAAGAAGAC
GAAAGAGTGAGAATGGACCAACAAGAGAGTCAGATCCTCCTAGGAACAGC
ACAGACACTGACAAGAGCGAGTTCCAAGACCAAAAGCCTGAAGCTGGATA
A back to topCoding sequence (CDS) from alignment at C9:54125784..54127784- >BolC9t58668H-R ID=BolC9t58668H-R|Name=BolC9t58668H-R|organism=Brassica oleracea HDEM|type=CDS|length=1470bp|location=Sequence derived from alignment at C9:54125784..54127784- (Brassica oleracea HDEM)
ATGGGATCTGGTTTAAACGATGCATTATCTAGGAAGTACAGCGGTTTGGA
GCTCTGGGAGATCATAGTGATTGTTCTCTCTGCAATATTCGTTTTAGTGT
TAGCTATATCGTTATGGCTTACTTTCAGAAGAAGAAACTCTAGATCTTCT
TCTTCTAATCAGATCCCTGTTAGCCACCAGCTTCCTCCTACTGTCTCCGA
AGAGATTAAAGAGATTAGAGTCGACGAGGTTTCCTCAAGCAACGGTGGTG
GTGGCAATGGATATCCTTCCATTAGCGAGAAATTTGGGCACAAAGAGACT
GAAAAAGGGATAGTAGTAGCAGATTCAGAGAATGGTGGAGATAGTAGCAG
GTCAGGATCGTTTAATCACTTGGAGAAGAAAGATGGTTCGAGCGTATCTT
CTGCTAATCCTATGACGGCTCCGTCTCCTTTATCTGGCCTTCCTGAGTTT
TCTCACCTCGGATGGGGGCATTGGTTTACTCTCAGAGATCTTCAGATGGC
TACGAACCAGTTCTCGAGGGATAATATAATTGGTGATGGTGGGTATGGAG
TTGTGTACCGTGGTAACCTTGTTAATGGTTCTCCTGTTGCCGTCAAAAAG
TTGCTCAACAATCTAGGACAAGCTGACAAAGACTTCAGAGTAGAGGTTGA
AGCTATAGGTCATGTTCGCCACAAAAACTTGGTCCGTCTTCTTGGATATT
GCATGGAAGGAACGCAGAGGATGCTGGTGTATGAGTATGTTAACAACGGA
AACTTGGAGCAATGGCTACGTGGAGACAATCAAAACCACGAGTATCTAAC
ATGGGAGGCACGGCTAAAGATTCTTATTGGAACAGCCAAAGCGCTTGCGT
ACCTTCACGAGGCGATTGAGCCAAAAGTGGTGCACAGAGACATAAAGTCG
AGCAACATTCTGATTGATGACAAATTCAATTCTAAAATTTCTGACTTTGG
ACTTGCCAAGCTGCTTGGTGCTGATAAAAGTTTTATAACTACTAGAGTTA
TGGGTACCTTTGGTTATGTAGCTCCAGAGTATGCGAACTCTGGTCTTCTG
AATGAGAAAAGTGATGTCTATAGCTTTGGTGTTGTACTATTGGAAGCTAT
AACTGGTAGATATCCTGTAGACTATGCTCGCCCACCACCTGAGGTGCATT
TGGTGGAATGGCTAAAGATGATGGTCCAACAGAGACGATCAGAAGAAGTG
ATTGACCCAAACCTCAATACGAAACCATCTACCAGTGCCTTAAAAAGAAC
ACTCTTGACTGCTTTGAGATGTGTTGATCCCATGTCTGAGAAACGACCAA
GGATGAGCCAAGTTGCACGTATGCTTGAATCAGAGGAGTACCCAATTCCT
AGAGAGGATAGAAGAAGACGAAAGAGTGAGAATGGACCAACAAGAGAGTC
AGATCCTCCTAGGAACAGCACAGACACTGACAAGAGCGAGTTCCAAGACC
AAAAGCCTGAAGCTGGATAA back to top
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