Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Cds size | 1287 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC1t00622H | BolC1t00622H | Brassica oleracea HDEM | gene | C1 3399443..3401223 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC1t00622H | BolC1t00622H | Brassica oleracea HDEM | CDS | C1 3399443..3400201 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BolC1t00622H-R ID=BolC1t00622H-R|Name=BolC1t00622H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1287bp|location=Sequence derived from alignment at C1:3399443..3401223+ (Brassica oleracea HDEM)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGACAGAAAACAAAGAAGCTGTTCAGACAGAAGCAAAAGACATGAA
AAACGAAGATGTAGACATTTGCCGGATTTGCCAGTCACCGGAGGAGCCAG
ACAATCCGTTGAGGCATCCTTGTGCATGTCGTGGCTCTCTCAAGTACGTC
CATACTGACTGTATCTTCCTCTGGATCAATCGTCGCAGACGCAAGCACTG
CGAGATTTGTAAACGCAGCTACTCAATCGTTCCGGTCTATTCCGACAACG
CTCCAGAGAGACTTCCATGTCAAGAACTCTTAAAGAGCCTTCTACTGAGA
GCATTTCGTTTCATGACTCTGATCCTTCCTTGGCTATTGGCGATTACTTT
CCACTCGTACTGCATGTTCTTTCTCGAGAGCAAGAGAGTTTTTGAACTGT
CATGTTTCTTTCTTGGTCTTATTTACACCGTCGAGATAGTGACTGAAATC
ACTTTCATCGTTGTTCTAAGGGTAGTATACGAAGAGCTTGTAAGAACAGA
ACACGAGTTGTTACGCCGTGTGCATCTCATAGCGAATGGTCTAAGACATA
AGGGTGTTACTAGAGTTCTGCTTGTGTTATGGAAGTATATGAGGGTTCTT
TGTGATTGGTGGCATGATCAGCTCTTGCAGTTACCTTTCTTCCACGACAT
GTTTATGAGAGGACCTCTTGCACTTGCGTTTGTTCCAAGAAACACACAGC
TTGATGAGTTTGGATCCATAAGAAGGTTTCTTTTCTTCTTGGATGACAAC
ACTTTTTCTGTTCTTGCCATCAACATCTCTTGGTCTTTCCTCGACTGTAT
GTTACCTTATTTGATTGGCCAAGCTGTCTTTGTGTTCCTACACTGTGTCC
CTCCACACGGTTGGGTTTTGGAAAACATATCTGAGATTACAGTTGGACAC
ATAGTTCTATTCTCAGTTTGGTTGGCTTACCTTAAAAGCGTTTTCACTCT
GATTCGGAATCCAACCAGAACAAGATGGTTTTCACTGTCAGTTAAAGATA
CATTGATCTTGTGTTTTAAAACCATCCTTCTGCCTTGGATGCTTGGTTTC
TGGATAGATTTCTGTACGTTCCCTCTAACCGGAGCAACGGTTTCTCAACG
GCTTGAGGTTGTTTCAGACTATCCACACGTGGCTGCCAAACATTGGTGTG
TAGGAATTGGGTACTTGCTAGTTGCTTTGTCTTGCATGAAGCTTATCCAG
GAGATGTCACATAACCAAACTACAAAATCACTAAACTGCATCTACGTTCC
CTACTCTTTGCGTTTGCTTTCCATGGAGCAGTGGTAG back to topprotein sequence of BolC1t00622H-R >BolC1t00622H-R-P ID=BolC1t00622H-R-P|Name=BolC1t00622H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=429bp
METENKEAVQTEAKDMKNEDVDICRICQSPEEPDNPLRHPCACRGSLKYV
HTDCIFLWINRRRRKHCEICKRSYSIVPVYSDNAPERLPCQELLKSLLLR
AFRFMTLILPWLLAITFHSYCMFFLESKRVFELSCFFLGLIYTVEIVTEI
TFIVVLRVVYEELVRTEHELLRRVHLIANGLRHKGVTRVLLVLWKYMRVL
CDWWHDQLLQLPFFHDMFMRGPLALAFVPRNTQLDEFGSIRRFLFFLDDN
TFSVLAINISWSFLDCMLPYLIGQAVFVFLHCVPPHGWVLENISEITVGH
IVLFSVWLAYLKSVFTLIRNPTRTRWFSLSVKDTLILCFKTILLPWMLGF
WIDFCTFPLTGATVSQRLEVVSDYPHVAAKHWCVGIGYLLVALSCMKLIQ
EMSHNQTTKSLNCIYVPYSLRLLSMEQW. back to topmRNA from alignment at C1:3399443..3401223+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BolC1t00622H-R ID=BolC1t00622H-R|Name=BolC1t00622H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1781bp|location=Sequence derived from alignment at C1:3399443..3401223+ (Brassica oleracea HDEM)
ATGGAGACAGAAAACAAAGAAGCTGTTCAGACAGAAGCAAAAGACATGAA
AAACGAAGATGTAGACATTTGCCGGATTTGCCAGTCACCGGAGGAGCCAG
ACAATCCGTTGAGGCATCCTTGTGCATGTCGTGGCTCTCTCAAGTACGTC
CATACTGACTGTATCTTCCTCTGGATCAATCGTCGCAGACGCAAGCACTG
CGAGATTTGTAAACGCAGCTACTCAATCGTTCCGGTCTATTCCGACAACG
CTCCAGAGAGACTTCCATGTCAAGAACTCTTAAAGAGCCTTCTACTGAGA
GCATTTCGTTTCATGACTCTGATCCTTCCTTGGCTATTGGCGATTACTTT
CCACTCGTACTGCATGTTCTTTCTCGAGAGCAAGAGAGTTTTTGAACTGT
CATGTTTCTTTCTTGGTCTTATTTACACCGTCGAGATAGTGACTGAAATC
ACTTTCATCGTTGTTCTAAGGGTAGTATACGAAGAGCTTGTAAGAACAGA
ACACGAGTTGTTACGCCGTGTGCATCTCATAGCGAATGGTCTAAGACATA
AGGGTGTTACTAGAGTTCTGCTTGTGTTATGGAAGTATATGAGGGTTCTT
TGTGATTGGTGGCATGATCAGCTCTTGCAGTTACCTTTCTTCCACGACAT
GTTTATGAGAGGACCTCTTGCACTTGCGTTTGTTCCAAGAAACACACAGC
TTGATGAGTTTGGATCCATAAGAAGGTTTCTTTTCTTCTTGGATGACAAC
ACTTTTTCTGTAAGTACTCTTAACCTTAATGCCTTGGCCACAATTAAAAA
AAAAAACTATTTTGCATAGTTAATATCATATTAATAAACTAATTAAACTA
TGTAATATGTAATTGTTTGTTAGAAATCATCTCCATTAGTTATTTGTTTT
TATAAAATATATAGTTATTATGATAAATAAAAAATTTGTATACAATTTTC
TAATATATACTACTGAAATTAAAATATTTTTAATTTTGTATGGGGTCTTG
TTTGCTCTGTAGGTTCTTGCCATCAACATCTCTTGGTCTTTCCTCGACTG
TATGTTACCTTATTTGATTGGCCAAGCTGTCTTTGTGTTCCTACACTGTG
TCCCTCCACACGGTTGGGTTTTGGAAAACATATCTGAGATTACAGTTGGA
CACATAGTTCTATTCTCAGTTTGGTTGGCTTACCTTAAAAGCGTTTTCAC
TCTGATTCGGAATCCAACCAGAACAAGATGGTTTTCACTGTCAGTTAAAG
ATACATTGATCTTGTGTTTTAAAACCATCCTTCTGCCTTGGATGCTTGGT
TTCTGGATAGATTTCTGTACGTTCCCTCTAACCGGAGCAACGGTTTCTCA
ACGGCTTGAGGTTGTTTCAGACTATCCACACGTGGCTGCCAAACATTGGT
GTGTAGGAATTGGGTACTTGCTAGTTGCTTTGTCTTGCATGAAGCTTATC
CAGGAGGTAACGTTTTGATCTTTGTTTCATAATTTACTCAGCTTCTTATT
CTTCTTCTTCCTTTTGACAGATTGTTCAGAAACGTGCCTTTTGGTATCTC
TTAGATGTCACATAACCAAACTACAAAATCACTAAACTGCATCTACGTTC
CCTACTCTTTGCGTTTGCTTTCCATGGAGCAGTGGTAGTGATTGTGTTCC
ACTTACCGATAAAGACAATCACTCTCACCATCCAGTCCTTTTTCCCTCTC
AAATTTGGGCAAAGCTCTCACCACACACTGTTTTCTAATTTCTTGATTCT
TGAATAAAAAATGTGTTATAAATGGTGCAGG back to topCoding sequence (CDS) from alignment at C1:3399443..3401223+ >BolC1t00622H-R ID=BolC1t00622H-R|Name=BolC1t00622H-R|organism=Brassica oleracea HDEM|type=CDS|length=1287bp|location=Sequence derived from alignment at C1:3399443..3401223+ (Brassica oleracea HDEM)
ATGGAGACAGAAAACAAAGAAGCTGTTCAGACAGAAGCAAAAGACATGAA
AAACGAAGATGTAGACATTTGCCGGATTTGCCAGTCACCGGAGGAGCCAG
ACAATCCGTTGAGGCATCCTTGTGCATGTCGTGGCTCTCTCAAGTACGTC
CATACTGACTGTATCTTCCTCTGGATCAATCGTCGCAGACGCAAGCACTG
CGAGATTTGTAAACGCAGCTACTCAATCGTTCCGGTCTATTCCGACAACG
CTCCAGAGAGACTTCCATGTCAAGAACTCTTAAAGAGCCTTCTACTGAGA
GCATTTCGTTTCATGACTCTGATCCTTCCTTGGCTATTGGCGATTACTTT
CCACTCGTACTGCATGTTCTTTCTCGAGAGCAAGAGAGTTTTTGAACTGT
CATGTTTCTTTCTTGGTCTTATTTACACCGTCGAGATAGTGACTGAAATC
ACTTTCATCGTTGTTCTAAGGGTAGTATACGAAGAGCTTGTAAGAACAGA
ACACGAGTTGTTACGCCGTGTGCATCTCATAGCGAATGGTCTAAGACATA
AGGGTGTTACTAGAGTTCTGCTTGTGTTATGGAAGTATATGAGGGTTCTT
TGTGATTGGTGGCATGATCAGCTCTTGCAGTTACCTTTCTTCCACGACAT
GTTTATGAGAGGACCTCTTGCACTTGCGTTTGTTCCAAGAAACACACAGC
TTGATGAGTTTGGATCCATAAGAAGGTTTCTTTTCTTCTTGGATGACAAC
ACTTTTTCTGTTCTTGCCATCAACATCTCTTGGTCTTTCCTCGACTGTAT
GTTACCTTATTTGATTGGCCAAGCTGTCTTTGTGTTCCTACACTGTGTCC
CTCCACACGGTTGGGTTTTGGAAAACATATCTGAGATTACAGTTGGACAC
ATAGTTCTATTCTCAGTTTGGTTGGCTTACCTTAAAAGCGTTTTCACTCT
GATTCGGAATCCAACCAGAACAAGATGGTTTTCACTGTCAGTTAAAGATA
CATTGATCTTGTGTTTTAAAACCATCCTTCTGCCTTGGATGCTTGGTTTC
TGGATAGATTTCTGTACGTTCCCTCTAACCGGAGCAACGGTTTCTCAACG
GCTTGAGGTTGTTTCAGACTATCCACACGTGGCTGCCAAACATTGGTGTG
TAGGAATTGGGTACTTGCTAGTTGCTTTGTCTTGCATGAAGCTTATCCAG
GAGATGTCACATAACCAAACTACAAAATCACTAAACTGCATCTACGTTCC
CTACTCTTTGCGTTTGCTTTCCATGGAGCAGTGGTAG back to top
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