Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Cds size | 600 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC1t00620H | BolC1t00620H | Brassica oleracea HDEM | gene | C1 3394127..3396262 - |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC1t00620H | BolC1t00620H | Brassica oleracea HDEM | CDS | C1 3394127..3394205 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BolC1t00620H-R ID=BolC1t00620H-R|Name=BolC1t00620H-R|organism=Brassica oleracea HDEM|type=mRNA|length=600bp|location=Sequence derived from alignment at C1:3394127..3396262- (Brassica oleracea HDEM)|Notes=Excludes all bases but those of type(s): exon.
ATGCAGTCGCTGCAGGAGAAGGCATCGGCGTGGAGCGGCGTGGATCAGGC
TGACGCGTTCGCCATAGACGAGTCCAATCTGTTCGAAAAGCTCGGTCTTC
AGAGCTTCATCAACCTCTCCACCAACTTCTACACCAGGGTATATGATGAT
GAAGAAGAAGAATGGTTTCGATCCATGTTTGCTAACTCTAAGAAAGAAGA
TGCCATTCAGAACCAGTATGAGTTCTTTGTTCAGCGTATGGGAGGCCCTC
CTCTCTATTCTCAAAGGAAAGGTCACCCTGCTCTGATTGGTCGTCACCGT
CCATTTCCGGTGACTCATGAAGCTGCAGAGAGATGGCTGCAGCATATGCA
AAATGCTATGGACGAGTCGGTTGACATTGACCAGGACTCTAAAGTCAAAA
TGATGAATTTCTTCAGGCACACTGCCTTCTTCCTTGTGGCTGGAAACGAG
TTGCAGAATCAGAATCAGAATCAGAACAACCAAGTTGCGTGTAAACACGC
TGCCAGTACACCAGCAGAAGAGGTTTTCCTTTTTCCTCTGATCTCCGGCG
GTTATTCTTCTTCTTCTTCTTCATCCGCCCATGGACTCAGATTCCTCTAG back to topprotein sequence of BolC1t00620H-R >BolC1t00620H-R-P ID=BolC1t00620H-R-P|Name=BolC1t00620H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=200bp
MQSLQEKASAWSGVDQADAFAIDESNLFEKLGLQSFINLSTNFYTRVYDD
EEEEWFRSMFANSKKEDAIQNQYEFFVQRMGGPPLYSQRKGHPALIGRHR
PFPVTHEAAERWLQHMQNAMDESVDIDQDSKVKMMNFFRHTAFFLVAGNE
LQNQNQNQNNQVACKHAASTPAEEVFLFPLISGGYSSSSSSSAHGLRFL. back to topmRNA from alignment at C1:3394127..3396262- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >BolC1t00620H-R ID=BolC1t00620H-R|Name=BolC1t00620H-R|organism=Brassica oleracea HDEM|type=mRNA|length=2136bp|location=Sequence derived from alignment at C1:3394127..3396262- (Brassica oleracea HDEM)
ATGCAGTCGCTGCAGGAGAAGGCATCGGCGTGGAGCGGCGTGGATCAGGC
TGACGCGTTCGCCATAGACGAGTCCAATCTGTTCGAAAAGCTCGGTCTTC
AGAGCTTCATCAACCTCTCCACCAACTTCTACACCAGGTTTCTTAATCTC
CTTTATGTGTGCTTTCTCTGGATTACAATTGGAACTGTGAATTCTTATTA
CAGAACTAAAGTCCACTGTCTGCTTTGTGTTCTGCTTTGAAAAGTCTTTT
ACTTTATTCTTTAAGAGACTTTTTTGGGTAATGCTTCCACTTATGTACCT
GTGTTTTTAAGTGGGTTCTTGTTTATTGTATAGAGTATATGATGATGACG
AAGAAGAATGGTTTTGGTTCATTTCTGTTTTGACAAAGTCTTTTACTTTT
TATTCTCTAGAGACTTCTTTTGGGTAATGCTTCCACTTTTGGACCTGTGT
TCTTGTAGGGTATATGATGATGAAGAAGAAGAATGGTTTCGATCCATGTT
TGCTAACTCTAAGAAAGAAGATGCCATTCAGAACCAGTATGAGTTCTTTG
TTCAGCGTATGGGAGGCCCTCCTCTCTATTCTCAAAGGAAAGGTTACGTC
TTTTTACATTTGGATTCTTCTTCCTTTACAATAAATGATGTGGTTCAAGT
TTGTTCGACTTGATTAGTGTTTTATAAGCTTGACTGATAGTCTTAGCTCA
GTTTCATTCTTTTCTTTTTTTGTCACTTTGGTGAAACATTTAGTCTCCCT
TGTGGTTCTCACTTAGTACAGAAGACACTCACGTATGCATCATTGTATAA
CCATTGGCATAATAATATAAATGCACTAATGTGAGTTGGGTTTGACTGAG
TATGACTTGGCATCTGCCAGACTCTTGCTTATTTTGTTGCCATTGATCTT
CCTGTGTAGGTCACCCTGCTCTGATTGGTCGTCACCGTCCATTTCCGGTG
ACTCATGAAGCTGCAGAGAGATGGCTGCAGCATATGCAAAATGCTATGGA
CGAGTCGGTTGACATTGACCAGGACTCTAAAGTCAAAATGATGAATTTCT
TCAGGTAACACAACACCATCTTTCTTTCTCAAACTCAAAAGTTTGTAAAT
TCAGAAACCAATAAAGTCAAATTGATGAGAGAGTCTGATAAACTTATGGA
TTCTGCACATGTGTTAGCGAGCAAATGTATTAAGTATTGCTGCTTTTGAT
CTGTTTCAGGCACACTGCCTTCTTCCTTGTGGCTGGAAACGAGTTGCAGA
ATCAGAATCAGAATCAGAACAACCAAGTTGCGTGTAAACACGCTGCCAGT
ACACCAGCAGAAGAGTAATTTTAACAACAGCATTCTTGTTTGTTATATTT
TTACCGTTTCATTCAAAAAGTACACAGACTCGAGGAATATTGGTCGTTCT
TCTAAAAGCTATGCACGAGATATATAGGACTGGTCTCGGCTCTTAATGCG
ATATATCACTCTTCTTTAGATGGAATGACACATTTTAAGATTCGAATAAA
GATGTATTACAAGTTTTACTTCTTCCAATGTCTCATATAGTATCCAACAC
TCTAAAGGAGAATAATCCTCAACCATCATATGGATGAAAAGCCTAAAATG
TTTACATTTTAAGAGGCCAAAAGTCCACATCATTTGAGTATTAACAAGAT
GCTATCAACTTCAAGAATTTGAAATGTAAATAAACATTACACTTTCTCTA
TGTTGAAGATTGTGAAACAACAGTGTTCCATGAGTTAGTTAGTTATATTC
TTCAAAAATACAGCAGCTTAAAGATTCATGTAAACAATGATGCTCCACGA
GTTTCAAAAGCGCAGTGTCTTTTCTCCCTAAAGTTTGTTGCATTTTTAAA
TCGATGTTCGTATATAAGTATACCAAAGCCGAAAACTTTTATGGTTCAAA
CTGAAAAATAGGAGCGAAAACCAAAAAAAAAAAAAAAACAGAGAGCTGTG
TGTGTATAGAAGGGGGGAGGAAATCAAAAATTCAAACGCTAGGGATTCTA
TATTTCTACATCTGGGGATGCTCTCCTCACTCCTTCGCTGCTGAAATCGC
CGACTAGGGTTTTCCTTTTTCCTCTGATCTCCGGCGGTTATTCTTCTTCT
TCTTCTTCATCCGCCCATGGACTCAGATTCCTCTAG back to topCoding sequence (CDS) from alignment at C1:3394127..3396262- >BolC1t00620H-R ID=BolC1t00620H-R|Name=BolC1t00620H-R|organism=Brassica oleracea HDEM|type=CDS|length=600bp|location=Sequence derived from alignment at C1:3394127..3396262- (Brassica oleracea HDEM)
ATGCAGTCGCTGCAGGAGAAGGCATCGGCGTGGAGCGGCGTGGATCAGGC
TGACGCGTTCGCCATAGACGAGTCCAATCTGTTCGAAAAGCTCGGTCTTC
AGAGCTTCATCAACCTCTCCACCAACTTCTACACCAGGGTATATGATGAT
GAAGAAGAAGAATGGTTTCGATCCATGTTTGCTAACTCTAAGAAAGAAGA
TGCCATTCAGAACCAGTATGAGTTCTTTGTTCAGCGTATGGGAGGCCCTC
CTCTCTATTCTCAAAGGAAAGGTCACCCTGCTCTGATTGGTCGTCACCGT
CCATTTCCGGTGACTCATGAAGCTGCAGAGAGATGGCTGCAGCATATGCA
AAATGCTATGGACGAGTCGGTTGACATTGACCAGGACTCTAAAGTCAAAA
TGATGAATTTCTTCAGGCACACTGCCTTCTTCCTTGTGGCTGGAAACGAG
TTGCAGAATCAGAATCAGAATCAGAACAACCAAGTTGCGTGTAAACACGC
TGCCAGTACACCAGCAGAAGAGGTTTTCCTTTTTCCTCTGATCTCCGGCG
GTTATTCTTCTTCTTCTTCTTCATCCGCCCATGGACTCAGATTCCTCTAG back to top
|