Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Cds size | 1704 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC1t00601H | BolC1t00601H | Brassica oleracea HDEM | gene | C1 3251491..3254760 - |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC1t00601H | BolC1t00601H | Brassica oleracea HDEM | CDS | C1 3251491..3251636 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BolC1t00601H-R ID=BolC1t00601H-R|Name=BolC1t00601H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1704bp|location=Sequence derived from alignment at C1:3251491..3254760- (Brassica oleracea HDEM)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTTCGTTGATCACAGCCAAAGCAATTATGAGTCATCATCATGTTTT
GTCCTCAACTAGAATCACTACACTTTGTTCCGACAAAGCCATCGACAACC
AACAAAGAAAAACAAAACTCCAAATCTCTCACCGATTTTTCTCCCGCCGA
ACAATATCTGCAGCTGTAATCAACTCAGCGTCGCCTGTGCCGAAGAAAGA
GACGGTGGAAGATGAGAGACGGTGTCATGTTGCGTGGACAAGTGTACAAC
AAGAGAAGTGGGAGGGTGAGCTTACTGTCCAAGGAAAGATCCCCACTTGG
CTGAATGGTACGTATCTAAGAAACGGACCGGGCCTATGGAACATCGGAGA
CCACGACTTCCGACATCTCTTCGACGGCTACTCCACACTAGTCAAGCTCG
AATTCGACGACGGTCGTATATTCTCCGGCCACCGTCTCCTCGAATCCAAC
GCCTACAAAGCCGCCAAGAAACACAAGAAGCTCTGTTACCGCGAATTCTC
CGAGACTCCAAAACCGTCGAGAAGCAACTTCAAGAACCCTTTCTCCGGGG
TCGGAGAGATCGTCAAACTATTCTCCGGCGAGTCTTTAACGGACAACGCC
AACACCGGAGTGATCCGTCTCGGTGACGGACGTGTCATGTGCCTCACGGA
GACTCAAAAAGGATCGATTCTTGTCGACCATGATACGTTAGACACGATAG
GGAAGTTCAAATACGACGACGGTTTGTGCGATCACATGATCCACTCGGCG
CATCCCATCGTGACAGAGACGGAGATGTGGACGTTGATACCTGATCTTGT
TAAGCCTGGTTACCGGGTCGTGAGGATGGAGGCCGGGTCGAATAAAAGGG
AGGTTGTGGGGCGGGTTAAATGTCGGTCCGGGTCGTGGGGACCCGGGTGG
GTTCACTCGTTTGCGGTGACGGAGAATTATGTTTTGATACCGGAAATGCC
CCTGAGGTATTCGGTGAGGAATCTGCTTAGAGCTGAGCCGACGCCGCTTT
ACAAGTTTGAGTGGTGTCCTAACGACGGAGCTTTTGTTCATGTCATGTCC
AAACTCACTGGAGAAATCGTGGCAAGCGTGGAGGTCCCTGCATACTTAAC
GTTTCACTTCATAAACGCATACGAAGAAGATGAAAATGGAGACGGGAAAG
CGACGGTCATCATTGCAGATTGTTGCGAACACAACGCAGATACGCGGATA
CTCGATATGCTCCGTCTCCACACATTACGTTCCTCACATGGTGACGACGT
CTTACCCGACGCTAGGATTGGAAGATTCAGGATACCGTTGGATGGAAGCA
AGTACGGGAAACTGGAGACGGCAGTGGAGGCGGAGAAGCATGGGAGGGCG
ATGGATATGTGCAGCATCAACCCTTTGTATTTGGGTCTAAAGTATCGTTA
CGTTTATGCGTGTGGTGCTAAAAGACCTTGTAACTTCCCCAATGCCCTCA
CCAAGGTTGATATTGTGGAGAAGGAAGTGAAGATCTGGCACGAACATGGC
ATTATACCATCCGAGCCATTCTTTGTGCCTCGTCCAGGCGCAACCCATGA
AGATGATGGAGTGGTGATATCGATAGTAAGTGAAGAAAATGGAGGAAGCT
ATGCGATATTGCTTGATGGAAGCTCCTTTGAAGAAATAGCAAGAGCCAAG
TTTCCTTATGGTCTTCCTTATGGCTTACATGGTTGCTGGATCCCCAAGCA
CTGA back to topprotein sequence of BolC1t00601H-R >BolC1t00601H-R-P ID=BolC1t00601H-R-P|Name=BolC1t00601H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=568bp
MASLITAKAIMSHHHVLSSTRITTLCSDKAIDNQQRKTKLQISHRFFSRR
TISAAVINSASPVPKKETVEDERRCHVAWTSVQQEKWEGELTVQGKIPTW
LNGTYLRNGPGLWNIGDHDFRHLFDGYSTLVKLEFDDGRIFSGHRLLESN
AYKAAKKHKKLCYREFSETPKPSRSNFKNPFSGVGEIVKLFSGESLTDNA
NTGVIRLGDGRVMCLTETQKGSILVDHDTLDTIGKFKYDDGLCDHMIHSA
HPIVTETEMWTLIPDLVKPGYRVVRMEAGSNKREVVGRVKCRSGSWGPGW
VHSFAVTENYVLIPEMPLRYSVRNLLRAEPTPLYKFEWCPNDGAFVHVMS
KLTGEIVASVEVPAYLTFHFINAYEEDENGDGKATVIIADCCEHNADTRI
LDMLRLHTLRSSHGDDVLPDARIGRFRIPLDGSKYGKLETAVEAEKHGRA
MDMCSINPLYLGLKYRYVYACGAKRPCNFPNALTKVDIVEKEVKIWHEHG
IIPSEPFFVPRPGATHEDDGVVISIVSEENGGSYAILLDGSSFEEIARAK
FPYGLPYGLHGCWIPKH. back to topmRNA from alignment at C1:3251491..3254760- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >BolC1t00601H-R ID=BolC1t00601H-R|Name=BolC1t00601H-R|organism=Brassica oleracea HDEM|type=mRNA|length=3270bp|location=Sequence derived from alignment at C1:3251491..3254760- (Brassica oleracea HDEM)
ATGGCTTCGTTGATCACAGCCAAAGCAATTATGAGTCATCATCATGTTTT
GTCCTCAACTAGAATCACTACACTTTGTTCCGACAAAGCCATCGACAACC
AACAAAGAAAAACAAAACTCCAAATCTCTCACCGATTTTTCTCCCGCCGA
ACAATATCTGCAGCTGTAATCAACTCAGCGTCGCCTGTGCCGAAGAAAGA
GACGGTGGAAGATGAGAGACGGTGTCATGTTGCGTGGACAAGTGTACAAC
AAGAGAAGTGGGAGGGTGAGCTTACTGTCCAAGGAAAGATCCCCACTTGG
CTGGTTTGTCTTTTATCGTCATATTATATCCTCCAAATATATTTTAGCTA
TATTCGTTGAATTTCATACAAATATGTATCGTGCACACAATACACACTCA
CACTGGCACATGAATATGTATATATTACAAGACAAAACTATTTTTTCTTC
TATATAATTGCATGTAAATTTATTTATATTCTGTATAATCTTATAGTACA
TGATTTCATTACTAAGAAGTCTAAAGGATTAGATTAATCAATATGTTTGA
ATAGATATATTACGGTGCTAAGGCATATGGTTGGTAGTTGGTACACGTCT
ACGAGCGATACTCGTGACCATTGTTGCAATCTATAAACAGCGTACATTCA
GTCATGTTCCAAGTTAGACACCAACAAGTAACAATGTGTTAGCAAAAACT
TGTAATATAATCAATATATTTATATTTATACATAACTAACGTCGACTTTT
GTATATATTTAATTTGACATAAAGCGTTCAGAATCTTTTCCTTTTTAGTT
CTTATAAATCAGATAACAGTTATAAAACTGCATATAAAACAAACGATTAA
ACATTTTTCTAAACAATATTGTAAAAATGAGACAATTAATGATTATAAGG
TAACATGCAGAATGGTACGTATCTAAGAAACGGACCGGGCCTATGGAACA
TCGGAGACCACGACTTCCGACATCTCTTCGACGGCTACTCCACACTAGTC
AAGCTCGAATTCGACGACGGTCGTATATTCTCCGGCCACCGTCTCCTCGA
ATCCAACGCCTACAAAGCCGCCAAGAAACACAAGAAGCTCTGTTACCGCG
AATTCTCCGAGACTCCAAAACCGTCGAGAAGCAACTTCAAGAACCCTTTC
TCCGGGGTCGGAGAGATCGTCAAACTATTCTCCGGCGAGTCTTTAACGGA
CAACGCCAACACCGGAGTGATCCGTCTCGGTGACGGACGTGTCATGTGCC
TCACGGAGACTCAAAAAGGATCGATTCTTGTCGACCATGATACGTTAGAC
ACGATAGGGAAGTTCAAATACGACGACGGTTTGTGCGATCACATGATCCA
CTCGGCGCATCCCATCGTGACAGAGACGGAGATGTGGACGTTGATACCTG
ATCTTGTTAAGCCTGGTTACCGGGTCGTGAGGATGGAGGCCGGGTCGAAT
AAAAGGGAGGTTGTGGGGCGGGTTAAATGTCGGTCCGGGTCGTGGGGACC
CGGGTGGGTTCACTCGTTTGCGGTGACGGAGAATTATGTTTTGATACCGG
AAATGCCCCTGAGGTATTCGGTGAGGAATCTGCTTAGAGCTGAGCCGACG
CCGCTTTACAAGTTTGAGTGGTGTCCTAACGACGGAGCTTTTGTTCATGT
CATGTCCAAACTCACTGGAGAAATCGTAAGTGAACGTTTTAATAAGTCAA
TGGATTGTTTTCTTACTTTTTTTTTTTCATTCAGTTTTGGATTATGTTGG
TTATAGTACATATTTAGTTAAGTTCAATCAAAAAGATAGTGTTCATGTTT
ACTTAATCCTCCATTATTGGTATGTGGTATGTGGTAAGTGGCGTAACATG
TACGGTTGCTTGATGTCATAATGTGCATATATAATCAGAGTCACGATTTT
AGGGAAACATTGATGTATGGATATTAGTTAATATATGCAATGTTGTTCTA
TATTACTAAGCCAACTTTCAACGATCACTTTTGCCTTAGACTAGAAAATC
TTTTAGGTTTTACATGTGTTTAAGTGATACATATCATCTAAAAGGTCTTT
TTTTCTTCCATCTCTTTATACTATAGCCAGGATTTTAGAATTTAGAGTGA
GATCAAAGGGCTATTATTGGAGAGAAACCTATTAGAACGTTTAAACGTTA
TTGATTTACTTCAGAAAACCAATAGAAATACATGTGATACAATTGATTTT
TTATATTTATTTTCATTTTAAACATGAAAGTAAAGCATAATATTAATATG
ATATTCATTCGTGACCTAGGTGGCAAGCGTGGAGGTCCCTGCATACTTAA
CGTTTCACTTCATAAACGCATACGAAGAAGATGAAAATGGAGACGGGAAA
GCGACGGTCATCATTGCAGATTGTTGCGAACACAACGCAGATACGCGGAT
ACTCGATATGCTCCGTCTCCACACATTACGTTCCTCACATGGTGACGACG
TCTTACCCGACGCTAGGTATATATGCGTCAACTTTTTGATTACCATACCT
ACATTTTTACTTTTGATAATAGCTGAATATGTTGATGTAATCTTATGCAT
TATTAACATATATATACATGTGTTTAGGATTGGAAGATTCAGGATACCGT
TGGATGGAAGCAAGTACGGGAAACTGGAGACGGCAGTGGAGGCGGAGAAG
CATGGGAGGGCGATGGATATGTGCAGCATCAACCCTTTGTATTTGGGTCT
AAAGTATCGTTACGTTTATGCGTGTGGTGCTAAAAGACCTTGTAACTTCC
CCAATGCCCTCACCAAGGTAACCTATATGCATAGACTATAGCAAAACAAG
TTTTTACTGATATTCTTCAAGTTTTATATGGTGTTAGCGATATGGTCTTT
TTGTTATATATATGCGTTGTTGATCAAGATTTGTGAGTAGTAACTAAAAG
CATCTTCATCTCTTAAATAACATATTAGCTATTGTATGAGACAGGTTGAT
ATTGTGGAGAAGGAAGTGAAGATCTGGCACGAACATGGCATTATACCATC
CGAGCCATTCTTTGTGCCTCGTCCAGGCGCAACCCATGAAGATGATGGTT
AGTTCAAAATACATAGGTTTCGTTGTCTTTCTTTGATATTTTTTTTTTCT
AATATGGGTTTTGTGTTGTGAAAGGAGTGGTGATATCGATAGTAAGTGAA
GAAAATGGAGGAAGCTATGCGATATTGCTTGATGGAAGCTCCTTTGAAGA
AATAGCAAGAGCCAAGTTTCCTTATGGTCTTCCTTATGGCTTACATGGTT
GCTGGATCCCCAAGCACTGA back to topCoding sequence (CDS) from alignment at C1:3251491..3254760- >BolC1t00601H-R ID=BolC1t00601H-R|Name=BolC1t00601H-R|organism=Brassica oleracea HDEM|type=CDS|length=1704bp|location=Sequence derived from alignment at C1:3251491..3254760- (Brassica oleracea HDEM)
ATGGCTTCGTTGATCACAGCCAAAGCAATTATGAGTCATCATCATGTTTT
GTCCTCAACTAGAATCACTACACTTTGTTCCGACAAAGCCATCGACAACC
AACAAAGAAAAACAAAACTCCAAATCTCTCACCGATTTTTCTCCCGCCGA
ACAATATCTGCAGCTGTAATCAACTCAGCGTCGCCTGTGCCGAAGAAAGA
GACGGTGGAAGATGAGAGACGGTGTCATGTTGCGTGGACAAGTGTACAAC
AAGAGAAGTGGGAGGGTGAGCTTACTGTCCAAGGAAAGATCCCCACTTGG
CTGAATGGTACGTATCTAAGAAACGGACCGGGCCTATGGAACATCGGAGA
CCACGACTTCCGACATCTCTTCGACGGCTACTCCACACTAGTCAAGCTCG
AATTCGACGACGGTCGTATATTCTCCGGCCACCGTCTCCTCGAATCCAAC
GCCTACAAAGCCGCCAAGAAACACAAGAAGCTCTGTTACCGCGAATTCTC
CGAGACTCCAAAACCGTCGAGAAGCAACTTCAAGAACCCTTTCTCCGGGG
TCGGAGAGATCGTCAAACTATTCTCCGGCGAGTCTTTAACGGACAACGCC
AACACCGGAGTGATCCGTCTCGGTGACGGACGTGTCATGTGCCTCACGGA
GACTCAAAAAGGATCGATTCTTGTCGACCATGATACGTTAGACACGATAG
GGAAGTTCAAATACGACGACGGTTTGTGCGATCACATGATCCACTCGGCG
CATCCCATCGTGACAGAGACGGAGATGTGGACGTTGATACCTGATCTTGT
TAAGCCTGGTTACCGGGTCGTGAGGATGGAGGCCGGGTCGAATAAAAGGG
AGGTTGTGGGGCGGGTTAAATGTCGGTCCGGGTCGTGGGGACCCGGGTGG
GTTCACTCGTTTGCGGTGACGGAGAATTATGTTTTGATACCGGAAATGCC
CCTGAGGTATTCGGTGAGGAATCTGCTTAGAGCTGAGCCGACGCCGCTTT
ACAAGTTTGAGTGGTGTCCTAACGACGGAGCTTTTGTTCATGTCATGTCC
AAACTCACTGGAGAAATCGTGGCAAGCGTGGAGGTCCCTGCATACTTAAC
GTTTCACTTCATAAACGCATACGAAGAAGATGAAAATGGAGACGGGAAAG
CGACGGTCATCATTGCAGATTGTTGCGAACACAACGCAGATACGCGGATA
CTCGATATGCTCCGTCTCCACACATTACGTTCCTCACATGGTGACGACGT
CTTACCCGACGCTAGGATTGGAAGATTCAGGATACCGTTGGATGGAAGCA
AGTACGGGAAACTGGAGACGGCAGTGGAGGCGGAGAAGCATGGGAGGGCG
ATGGATATGTGCAGCATCAACCCTTTGTATTTGGGTCTAAAGTATCGTTA
CGTTTATGCGTGTGGTGCTAAAAGACCTTGTAACTTCCCCAATGCCCTCA
CCAAGGTTGATATTGTGGAGAAGGAAGTGAAGATCTGGCACGAACATGGC
ATTATACCATCCGAGCCATTCTTTGTGCCTCGTCCAGGCGCAACCCATGA
AGATGATGGAGTGGTGATATCGATAGTAAGTGAAGAAAATGGAGGAAGCT
ATGCGATATTGCTTGATGGAAGCTCCTTTGAAGAAATAGCAAGAGCCAAG
TTTCCTTATGGTCTTCCTTATGGCTTACATGGTTGCTGGATCCCCAAGCA
CTGA back to top
|