Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Cds size | 1110 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC1t00270H | BolC1t00270H | Brassica oleracea HDEM | gene | C1 1497637..1499079 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC1t00270H | BolC1t00270H | Brassica oleracea HDEM | CDS | C1 1497637..1497895 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BolC1t00270H-R ID=BolC1t00270H-R|Name=BolC1t00270H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1110bp|location=Sequence derived from alignment at C1:1497637..1499079+ (Brassica oleracea HDEM)|Notes=Excludes all bases but those of type(s): exon.
ATGTCAATGTTGAAACTCAACACCCCCACTTTCCCAAATTTAGCGTCATC
TCTGTTCCCAAATTCGAACCCAAGAGGACCCAGCGAGATTCGATTCTCCA
ACAGATCAAATTCGAACCCAAGAGGACCCAGCCAGATTCGATTCTCTAAC
AGATGGGGCAAGGCTAACGCCGATCTCCTCTCTCTCTCTCTTTTGGATCA
ACGTTGCAGAAGGGATCAAATTCGTTGTTGCGGGATGGCAGGAGGAGGAG
GAGGAGGAGGTGATCATCATCATGTGGGAGTGTGGTGGGACCTGAACACG
TGTCCGGTTCCGGCTGGTGTAGACCCTCGTTGTGTCCGTCCGTGTATAGA
ATCTGCCTTGGAGAAGCTGTTTGGTCGTCGTTCTGCAGTCAGCATCTATA
TCTATGCCATAGGAAACCTAGAATTCATCTCTACTGACCTCTTGCAAAAC
ATCTCTTCCTCCGGAATCATTGTTACTCATGCCCCCTGCGGTATGCACGA
CTTACATGATTTTCTTATCGACTGGTCTGCGGATGAGCTTAAAAACCCAC
ATCCTCCTGGTTACGTAATGATCATCTCGAGTGATTATAGACTGCTTTAC
CCTAAGCGTTTTCGGCTTTTTGGATTCACTACTTTTGTTGCATATCCAAA
AGGTGTTCGCCTACTTGCCCATCTTACCCAGCTAAAATTTATTGGCCGAG
AGTTTGACGAAGTGTTTGCCAAAGAGTTTGTCTGGGAAACCTTATTGAGT
GATAATTTGGATGAAACTTTATTATTGAGTGACAACAACACATGTGATGA
GAAACCTCTCTGCATTTGCAACATATGCTGTTATGATTACGAAGTATGTG
ACGAATTCATCACTCATCTCAAGTGTGAAGAGCACAGAAACCAGTGGTCT
GAAATTGTGCACGACCGCAAGCTTAAATATTTTTGCCAAGTTTGCAATTA
TCCCGCCTATAGCCACTATAACCTCTTTCTCCATAACCAAAGTGAAGCAC
ATAATCGCAAGCTGGTTGAGAAACAGGCTCAAGAAGAGGAGGATTGCCAG
AGCAGGAAGACAAATCCAGAATTGGATCTCTTCTACGAGAGAAACAAGGA
GCAATCTCTT back to topprotein sequence of BolC1t00270H-R >BolC1t00270H-R-P ID=BolC1t00270H-R-P|Name=BolC1t00270H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=370bp
MSMLKLNTPTFPNLASSLFPNSNPRGPSEIRFSNRSNSNPRGPSQIRFSN
RWGKANADLLSLSLLDQRCRRDQIRCCGMAGGGGGGGDHHHVGVWWDLNT
CPVPAGVDPRCVRPCIESALEKLFGRRSAVSIYIYAIGNLEFISTDLLQN
ISSSGIIVTHAPCGMHDLHDFLIDWSADELKNPHPPGYVMIISSDYRLLY
PKRFRLFGFTTFVAYPKGVRLLAHLTQLKFIGREFDEVFAKEFVWETLLS
DNLDETLLLSDNNTCDEKPLCICNICCYDYEVCDEFITHLKCEEHRNQWS
EIVHDRKLKYFCQVCNYPAYSHYNLFLHNQSEAHNRKLVEKQAQEEEDCQ
SRKTNPELDLFYERNKEQSL back to topmRNA from alignment at C1:1497637..1499079+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BolC1t00270H-R ID=BolC1t00270H-R|Name=BolC1t00270H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1443bp|location=Sequence derived from alignment at C1:1497637..1499079+ (Brassica oleracea HDEM)
ATGTCAATGTTGAAACTCAACACCCCCACTTTCCCAAATTTAGCGTCATC
TCTGTTCCCAAATTCGAACCCAAGAGGACCCAGCGAGATTCGATTCTCCA
ACAGATCAAATTCGAACCCAAGAGGACCCAGCCAGATTCGATTCTCTAAC
AGATGGGGCAAGGCTAACGCCGATCTCCTCTCTCTCTCTCTTTTGGATCA
ACGTTGCAGAAGGGATCAAATTCGTTGTTGCGGGATGGCAGGAGGAGGAG
GAGGAGGAGGTCGGTAGTTATTGATTCAAATTTACTTGTGATTAGATTTT
AAAATGGTGGTTGTGTTTGGTTTTAGGTGATCATCATCATGTGGGAGTGT
GGTGGGACCTGAACACGTGTCCGGTTCCGGCTGGTGTAGACCCTCGTTGT
GTCCGTCCGTGTATAGAATCTGCCTTGGAGAAGCTGTTTGGTCGTCGTTC
TGCAGTCAGCATCTATATCTATGCCATAGGAAACCTAGAATTCATCTCTA
CTGACCTCTTGCAAAACATCTCTTCCTCCGGAATCATTGTTACTCATGCC
CCCTGCGGTAAAGTCAATCAAATCAATCCTAATCGATTTGTTTTGTTTAG
TCTAATTAATTAGAGAGAGTTAGTAGTCTCATGATCTGATCTGGCCTCCT
TCTCTACTCTTAGGTATGCACGACTTACATGATTTTCTTATCGACTGGTC
TGCGGATGAGCTTAAAAACCCACATCCTCCTGGTTACGTAATGATCATCT
CGAGTGATTATAGACTGCTTTACCCTAAGCGTTTTCGGCTTTTTGGATTC
ACTACTTTTGTTGCATATCCAAAAGGTGTTCGCCTACTTGCCCATCTTAC
CCAGCTAAAATTTATTGGCCGAGAGTTTGACGAAGTGTTTGCCAAAGAGT
TTGTCTGGGAAACCTTATTGAGTGATAATTTGGATGAAACTTTATTATTG
AGTGACAACAACACATGTGATGAGAAACCTCTCTGCATTTGCAACATATG
CTGTTATGATTACGAAGTATGTGACGAATTCATCACTCATCTCAAGTGTG
AAGAGCACAGAAACCAGGTAATTAAGCAAGCAGCATGCATCCTCAGCTTT
TTTTTTATCATTTTTTTTCATGTATCTGTGTGTGTGTGCAGTGGTCTGAA
ATTGTGCACGACCGCAAGCTTAAATATTTTTGCCAAGTTTGCAATTATCC
CGCCTATAGCCACTATAACCTCTTTCTCCATAACCAAAGTGAAGCACATA
ATCGCAAGGTAAGCGCAGCTTGTGATCATTATTATACAGTTTAACAACTC
TCTGTATCGCTAAAATTTGATCCCCATTTTGGTTTGTTTTCAAGCTGGTT
GAGAAACAGGCTCAAGAAGAGGAGGATTGCCAGAGCAGGAAGACAAATCC
AGAATTGGATCTCTTCTACGAGAGAAACAAGGAGCAATCTCTT back to topCoding sequence (CDS) from alignment at C1:1497637..1499079+ >BolC1t00270H-R ID=BolC1t00270H-R|Name=BolC1t00270H-R|organism=Brassica oleracea HDEM|type=CDS|length=1110bp|location=Sequence derived from alignment at C1:1497637..1499079+ (Brassica oleracea HDEM)
ATGTCAATGTTGAAACTCAACACCCCCACTTTCCCAAATTTAGCGTCATC
TCTGTTCCCAAATTCGAACCCAAGAGGACCCAGCGAGATTCGATTCTCCA
ACAGATCAAATTCGAACCCAAGAGGACCCAGCCAGATTCGATTCTCTAAC
AGATGGGGCAAGGCTAACGCCGATCTCCTCTCTCTCTCTCTTTTGGATCA
ACGTTGCAGAAGGGATCAAATTCGTTGTTGCGGGATGGCAGGAGGAGGAG
GAGGAGGAGGTGATCATCATCATGTGGGAGTGTGGTGGGACCTGAACACG
TGTCCGGTTCCGGCTGGTGTAGACCCTCGTTGTGTCCGTCCGTGTATAGA
ATCTGCCTTGGAGAAGCTGTTTGGTCGTCGTTCTGCAGTCAGCATCTATA
TCTATGCCATAGGAAACCTAGAATTCATCTCTACTGACCTCTTGCAAAAC
ATCTCTTCCTCCGGAATCATTGTTACTCATGCCCCCTGCGGTATGCACGA
CTTACATGATTTTCTTATCGACTGGTCTGCGGATGAGCTTAAAAACCCAC
ATCCTCCTGGTTACGTAATGATCATCTCGAGTGATTATAGACTGCTTTAC
CCTAAGCGTTTTCGGCTTTTTGGATTCACTACTTTTGTTGCATATCCAAA
AGGTGTTCGCCTACTTGCCCATCTTACCCAGCTAAAATTTATTGGCCGAG
AGTTTGACGAAGTGTTTGCCAAAGAGTTTGTCTGGGAAACCTTATTGAGT
GATAATTTGGATGAAACTTTATTATTGAGTGACAACAACACATGTGATGA
GAAACCTCTCTGCATTTGCAACATATGCTGTTATGATTACGAAGTATGTG
ACGAATTCATCACTCATCTCAAGTGTGAAGAGCACAGAAACCAGTGGTCT
GAAATTGTGCACGACCGCAAGCTTAAATATTTTTGCCAAGTTTGCAATTA
TCCCGCCTATAGCCACTATAACCTCTTTCTCCATAACCAAAGTGAAGCAC
ATAATCGCAAGCTGGTTGAGAAACAGGCTCAAGAAGAGGAGGATTGCCAG
AGCAGGAAGACAAATCCAGAATTGGATCTCTTCTACGAGAGAAACAAGGA
GCAATCTCTT back to top
|