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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
BnaA01G0017800WE | BnaA01G0017800WE | Brassica napus Westar | gene | westarv0_A01 1153292..1154536 - |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
BnaA01T0017800WE.exon1 | BnaA01T0017800WE.exon1 | Brassica napus Westar | exon | westarv0_A01 1153292..1154536 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
cds.BnaA01T0017800WE | cds.BnaA01T0017800WE | Brassica napus Westar | CDS | westarv0_A01 1153292..1154536 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BnaA01T0017800WE ID=BnaA01T0017800WE|Name=BnaA01T0017800WE|organism=Brassica napus Westar|type=mRNA|length=1245bp|location=Sequence derived from alignment at westarv0_A01:1153292..1154536- (Brassica napus Westar)|Notes=Excludes all bases but those of type(s): exon.
ATGACAATGTGCGATCTTCCACACGATTTGATAAGGGAAAAGATACTCAC CAATGTTCCAATAACATCTCTGAGAGCAGTGCGGTGTACTTGCAAATTAT GGAATGCATTATCCAAAGAATTTATCCTTGGTAACGAAACATCAAGGCAG CATCATGAGTTTCAAGGGTTCATGATGATATCTAATAAGATTTGCCCCTT TAGAGTCGATATCCAAGGAATCATCAGCAATCACAACAATTTGGTCGATC CATCCACGAAGAAATTAGATTTACTTGATCAAGTCGAGGTATCTAGAGTA ATTCACTGTGATGGCTTACTGTTATGCGTCACCAACAACAACTCCAAACT CTTGGTGTGGAACCCTTATCTTGCGCAAACAAGGTGGATCAGACCGAGAA TATGTTACGAAAAATCAGACATGTATGCTATTGGTTACGACAACAGCAGT AAGGTCCGTAACTATAAAATCTTGAGACTTAGTACTAGTCATTATTATGG CCTAGGCATTGAGTTGGAAATCTACGACTTTAGTTCTGATTCATGGAGCT TTCTTGGTGTCTTCCCTGACTATAGAATAAATTCTTATCACAGCCTCGTG AATTTGGCGGGATCTACTTACCTTTTTGCTAGAGTGATCAGAAGAACAAC TCGTAAAAAGAGAAATCATTATGAGTATTTAGCATCTTTGGAAAATTGTT TGCTATGTTTTGATTATACAAGTGAGAGATTTGAACAGCACATGCCTCCG TTTAGCCCTTATTATTATTATACGGATACTGTGGCTTTATCTACAGTTAG GGAAGATAAACTTGCTGCACATAGTTATGGTTTTTATCAATCGTCTGTGA CATTGGAGGTTTGGGTTACGAATAAGATTGAGGACAAGGCGGTGTCGTGG AGCAAGTTTTTAAAGGTGGATATGGGATCAATGGTACCAGTCAGGGATTT TCTGTGCAATTGGAAAGCTGATTTACTCTTCGTTGATGAGGAGAATAAAG TCGCTGTGATAATCCATGAAAGCCGAAATTACTCAACCAAGCTCCAACTA ACAGCTTACATCATTAGAGAAGATGGATACTTCAGATCTATGAACATCGG TGAAGTGAATTTAAATTTCTCTAGAAAGCTTAGTGTGCAACATGTGTTTT CCCCTTATCATCCAAGTTTAGTGCAAATCAACCGACGGTCATACCGGGGA GATGGCTGTGCGAATGGGCATTCGGAACCTTTGGGTAGAGTCTGA back to topprotein sequence of BnaA01T0017800WE >BnaA01T0017800WE-P ID=BnaA01T0017800WE-P|Name=BnaA01T0017800WE|organism=Brassica napus Westar|type=polypeptide|length=415bp
MTMCDLPHDLIREKILTNVPITSLRAVRCTCKLWNALSKEFILGNETSRQ HHEFQGFMMISNKICPFRVDIQGIISNHNNLVDPSTKKLDLLDQVEVSRV IHCDGLLLCVTNNNSKLLVWNPYLAQTRWIRPRICYEKSDMYAIGYDNSS KVRNYKILRLSTSHYYGLGIELEIYDFSSDSWSFLGVFPDYRINSYHSLV NLAGSTYLFARVIRRTTRKKRNHYEYLASLENCLLCFDYTSERFEQHMPP FSPYYYYTDTVALSTVREDKLAAHSYGFYQSSVTLEVWVTNKIEDKAVSW SKFLKVDMGSMVPVRDFLCNWKADLLFVDEENKVAVIIHESRNYSTKLQL TAYIIREDGYFRSMNIGEVNLNFSRKLSVQHVFSPYHPSLVQINRRSYRG DGCANGHSEPLGRV. back to topmRNA from alignment at westarv0_A01:1153292..1154536- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BnaA01T0017800WE ID=BnaA01T0017800WE|Name=BnaA01T0017800WE|organism=Brassica napus Westar|type=mRNA|length=1245bp|location=Sequence derived from alignment at westarv0_A01:1153292..1154536- (Brassica napus Westar) ATGACAATGTGCGATCTTCCACACGATTTGATAAGGGAAAAGATACTCAC
CAATGTTCCAATAACATCTCTGAGAGCAGTGCGGTGTACTTGCAAATTAT
GGAATGCATTATCCAAAGAATTTATCCTTGGTAACGAAACATCAAGGCAG
CATCATGAGTTTCAAGGGTTCATGATGATATCTAATAAGATTTGCCCCTT
TAGAGTCGATATCCAAGGAATCATCAGCAATCACAACAATTTGGTCGATC
CATCCACGAAGAAATTAGATTTACTTGATCAAGTCGAGGTATCTAGAGTA
ATTCACTGTGATGGCTTACTGTTATGCGTCACCAACAACAACTCCAAACT
CTTGGTGTGGAACCCTTATCTTGCGCAAACAAGGTGGATCAGACCGAGAA
TATGTTACGAAAAATCAGACATGTATGCTATTGGTTACGACAACAGCAGT
AAGGTCCGTAACTATAAAATCTTGAGACTTAGTACTAGTCATTATTATGG
CCTAGGCATTGAGTTGGAAATCTACGACTTTAGTTCTGATTCATGGAGCT
TTCTTGGTGTCTTCCCTGACTATAGAATAAATTCTTATCACAGCCTCGTG
AATTTGGCGGGATCTACTTACCTTTTTGCTAGAGTGATCAGAAGAACAAC
TCGTAAAAAGAGAAATCATTATGAGTATTTAGCATCTTTGGAAAATTGTT
TGCTATGTTTTGATTATACAAGTGAGAGATTTGAACAGCACATGCCTCCG
TTTAGCCCTTATTATTATTATACGGATACTGTGGCTTTATCTACAGTTAG
GGAAGATAAACTTGCTGCACATAGTTATGGTTTTTATCAATCGTCTGTGA
CATTGGAGGTTTGGGTTACGAATAAGATTGAGGACAAGGCGGTGTCGTGG
AGCAAGTTTTTAAAGGTGGATATGGGATCAATGGTACCAGTCAGGGATTT
TCTGTGCAATTGGAAAGCTGATTTACTCTTCGTTGATGAGGAGAATAAAG
TCGCTGTGATAATCCATGAAAGCCGAAATTACTCAACCAAGCTCCAACTA
ACAGCTTACATCATTAGAGAAGATGGATACTTCAGATCTATGAACATCGG
TGAAGTGAATTTAAATTTCTCTAGAAAGCTTAGTGTGCAACATGTGTTTT
CCCCTTATCATCCAAGTTTAGTGCAAATCAACCGACGGTCATACCGGGGA
GATGGCTGTGCGAATGGGCATTCGGAACCTTTGGGTAGAGTCTGA back to topCoding sequence (CDS) from alignment at westarv0_A01:1153292..1154536- >BnaA01T0017800WE ID=BnaA01T0017800WE|Name=BnaA01T0017800WE|organism=Brassica napus Westar|type=CDS|length=1245bp|location=Sequence derived from alignment at westarv0_A01:1153292..1154536- (Brassica napus Westar) ATGACAATGTGCGATCTTCCACACGATTTGATAAGGGAAAAGATACTCAC CAATGTTCCAATAACATCTCTGAGAGCAGTGCGGTGTACTTGCAAATTAT GGAATGCATTATCCAAAGAATTTATCCTTGGTAACGAAACATCAAGGCAG CATCATGAGTTTCAAGGGTTCATGATGATATCTAATAAGATTTGCCCCTT TAGAGTCGATATCCAAGGAATCATCAGCAATCACAACAATTTGGTCGATC CATCCACGAAGAAATTAGATTTACTTGATCAAGTCGAGGTATCTAGAGTA ATTCACTGTGATGGCTTACTGTTATGCGTCACCAACAACAACTCCAAACT CTTGGTGTGGAACCCTTATCTTGCGCAAACAAGGTGGATCAGACCGAGAA TATGTTACGAAAAATCAGACATGTATGCTATTGGTTACGACAACAGCAGT AAGGTCCGTAACTATAAAATCTTGAGACTTAGTACTAGTCATTATTATGG CCTAGGCATTGAGTTGGAAATCTACGACTTTAGTTCTGATTCATGGAGCT TTCTTGGTGTCTTCCCTGACTATAGAATAAATTCTTATCACAGCCTCGTG AATTTGGCGGGATCTACTTACCTTTTTGCTAGAGTGATCAGAAGAACAAC TCGTAAAAAGAGAAATCATTATGAGTATTTAGCATCTTTGGAAAATTGTT TGCTATGTTTTGATTATACAAGTGAGAGATTTGAACAGCACATGCCTCCG TTTAGCCCTTATTATTATTATACGGATACTGTGGCTTTATCTACAGTTAG GGAAGATAAACTTGCTGCACATAGTTATGGTTTTTATCAATCGTCTGTGA CATTGGAGGTTTGGGTTACGAATAAGATTGAGGACAAGGCGGTGTCGTGG AGCAAGTTTTTAAAGGTGGATATGGGATCAATGGTACCAGTCAGGGATTT TCTGTGCAATTGGAAAGCTGATTTACTCTTCGTTGATGAGGAGAATAAAG TCGCTGTGATAATCCATGAAAGCCGAAATTACTCAACCAAGCTCCAACTA ACAGCTTACATCATTAGAGAAGATGGATACTTCAGATCTATGAACATCGG TGAAGTGAATTTAAATTTCTCTAGAAAGCTTAGTGTGCAACATGTGTTTT CCCCTTATCATCCAAGTTTAGTGCAAATCAACCGACGGTCATACCGGGGA GATGGCTGTGCGAATGGGCATTCGGAACCTTTGGGTAGAGTCTGA back to top
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