Bnascaffold898T0000400WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBnascaffold898T0000400WE
Unique NameBnascaffold898T0000400WE-P
Typepolypeptide
OrganismBrassica napus Westar (cv. Westar, rapeseed)
Sequence length302
Homology
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CAF2043664.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 541 bits (1394), Expect = 1.380e-191
Identity = 276/338 (81.66%), Postives = 279/338 (82.54%), Query Frame = 0
Query:   12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKY------REHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV------------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQFRTRRLLAGCLSC 301
            VRRSGPKALDDPKSS +PQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGE PIANK        +H PHGVPRHLRAQGVGLWAPHSTRLETRTKESDM ASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV                                          LPTLET QPEVGSSGWKSTAR VV  AFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWA+ SQFRTRRLLAGCLSC
Sbjct:   57 VRRSGPKALDDPKSSAQPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGETPIANKRCCLNRGLQHVPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMYASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVARPIPGRRGKSQASMSRMARWSLQNLGREPGRSSRWCRSRWYLPTLETGQPEVGSSGWKSTARHVVCNAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWAQRSQFRTRRLLAGCLSC 394          
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CDY19789.1 (BnaA09g04420D [Brassica napus])

HSP 1 Score: 496 bits (1276), Expect = 2.500e-174
Identity = 250/293 (85.32%), Postives = 250/293 (85.32%), Query Frame = 0
Query:   12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV-----------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 263
            V R GPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV                                         LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR
Sbjct:   57 VSRFGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVARPIPGRRGKSQASMSRRARRSLQNLGREPGRSGRRGRSWCLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 349          
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CAF2098438.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 481 bits (1238), Expect = 2.340e-169
Identity = 242/285 (84.91%), Postives = 250/285 (87.72%), Query Frame = 0
Query:   12 VRRSGPKALDDPKSSTRPQSG--EASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRA-----QGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQF 289
            VRRSGPKALDDPKSSTRPQ    + SSATDRAQ PWKGAPERVR+PSCPDPVA RGAVYESGCLGMQPQSGGKFRPRLNMGERPIAN Y EH PHG    +       +G  +WA +STRLETRT ESDMCASQ V RGGCFVEPSHGIESSKWAIFGKQNWRCGMN+KPGYGAQL ANLEPTKGVGRLRQ D GHGSRNPLRSVLPTLETAQ EVGSSGWKSTAR +VSG FPAALEN EDRVPLTPGRTHNRIRSPRQGKSAKWI NFGKRIGSEGWARGSQF
Sbjct:   13 VRRSGPKALDDPKSSTRPQKRPQQTSSATDRAQAPWKGAPERVRSPSCPDPVAQRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANTYHEHTPHGGTSTMSFPVIYDRGCHMWALYSTRLETRTNESDMCASQWVRRGGCFVEPSHGIESSKWAIFGKQNWRCGMNQKPGYGAQLSANLEPTKGVGRLRQHDSGHGSRNPLRSVLPTLETAQSEVGSSGWKSTARCMVSGVFPAALENLEDRVPLTPGRTHNRIRSPRQGKSAKWICNFGKRIGSEGWARGSQF 297          
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CDY55729.1 (BnaC08g46150D [Brassica napus])

HSP 1 Score: 434 bits (1115), Expect = 4.460e-148
Identity = 242/379 (63.85%), Postives = 243/379 (64.12%), Query Frame = 0
Query:   12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-----------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV---------------------------------------------------------GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV-----------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 263
            V R GP  LDDPKSSTRPQSGEASSATDRAQVPWK APERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLN G+RPIANKYRE                             HAP GVPRHLRAQGVGLWAPHST LETRTKESDMCASQ V                                                         GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV                                         LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR
Sbjct:   89 VGRFGPIGLDDPKSSTRPQSGEASSATDRAQVPWKRAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNRGDRPIANKYREGSGWGPAMRPGQMRNRAIRSADRFGAWTDHAPRGVPRHLRAQGVGLWAPHSTCLETRTKESDMCASQLVSKPVRRKEADWLDPSRCEHACRDPKDGELCLSGAKPEETLVEARSDTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVARPIPGRRGKSQASMSRKARRSLQNLGREPGRSGRRCRSWCLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 467          
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CAF2043650.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 414 bits (1063), Expect = 4.920e-140
Identity = 240/428 (56.07%), Postives = 260/428 (60.75%), Query Frame = 0
Query:   12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRG-----GCFVEPSH---------------------------------------------------GIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDG----------------GHGSRNPLRSV-----------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQFRTRRLLAGCLSC 301
            VRRS PKALDDP+SSTRPQSGEASSA  +AQVPWKGAPERVR+PSCP+P+APRG +YESGCLGMQPQS GKFRPRLN+GERPIANKY E                         HAPHGVPRHLRA+GVGLWAP+STRLETRTKESD+CASQRV +         ++PS                                                     IESSKWAIFGK+NW+C MNRKP Y AQLRANLEPTKGVGRLR+QDG                GHGS+NPLRSV                                         LPTLETAQPEVGSS WKSTA  VVSGAF  ALENP+D+V LT GRTHNRIR     +SAKWI NFGKRIGSEGWARGSQFRT RLLAGCLSC
Sbjct:   56 VRRSCPKALDDPESSTRPQSGEASSAAGQAQVPWKGAPERVRSPSCPNPIAPRGTIYESGCLGMQPQSSGKFRPRLNVGERPIANKYHECLKLSGGKRMGAGDSSRSDAERSNPHAPHGVPRHLRAKGVGLWAPYSTRLETRTKESDICASQRVSKPVRRKEADLLDPSRCEHACRDPKDGEQCLSGAKPEETLVEARSDTDVQIVRLIWVGRVAALLSHPRIESSKWAIFGKRNWQCRMNRKPRYAAQLRANLEPTKGVGRLRRQDGFFSTKILSAREGYYNGGHGSQNPLRSVARHIPGRRGKSQASMSRRAQWLLQNLGREPKRSGHRCRSWCLPTLETAQPEVGSSIWKSTAHHVVSGAFRVALENPKDQVLLTRGRTHNRIR-----ESAKWIHNFGKRIGSEGWARGSQFRTHRLLAGCLSC 478          
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: KAG5568993.1 (hypothetical protein H5410_064037 [Solanum commersonii])

HSP 1 Score: 423 bits (1087), Expect = 3.080e-138
Identity = 246/467 (52.68%), Postives = 254/467 (54.39%), Query Frame = 0
Query:   28 RPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-------------------------------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQR--------------------------------------------------------VGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLR----------------------------------------------------------------------------------------SVLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQFRTRRLLAGCLSC 301
            RPQSGEASS  DRAQVPWKGAPERVRAP CPDPVAPRGAVYESGCLGMQP+SGG+FRPRLN GERPIANKYRE                                                 HAP GVPRHLRA G GL  PHS RLETRTKESDMCASQR                                                        VGR GCFVEP HGI+SSKWAIFGKQNWRCGMNRKPGYGA+LRANL+PTKGVGRLRQQDGGHGSRNPLR                                                                                        + LPTLE+AQPEVGSSGWKSTARRVVSGA PAALENPEDR+P TPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQ RTRRL   C SC
Sbjct:  312 RPQSGEASSVADRAQVPWKGAPERVRAPLCPDPVAPRGAVYESGCLGMQPKSGGEFRPRLNTGERPIANKYREGKMKRTLKRESKTGPPIGSGCGPVRIGAAAKARALDTPVETPSRRLWWQHAPLGVPRHLRAPGTGLRVPHSARLETRTKESDMCASQRGSKPVRRKEADWRDPPCEHSCRDPKDGELCLSGAKPEETLVEARSDTDVQIVRLTWVGRRGCFVEPRHGIKSSKWAIFGKQNWRCGMNRKPGYGAKLRANLDPTKGVGRLRQQDGGHGSRNPLRIGGRGGRCKTLGASLGGAAVGADLGGSSKYSNENFEGRRGERFHVNGTCTWIARFARTPKGNRVKIPEPGRGVRRRRREPREELSFLFNSLPTLESAQPEVGSSGWKSTARRVVSGALPAALENPEDRMPSTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQSRTRRLSVDCSSC 778          
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CAF2086468.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 398 bits (1022), Expect = 6.300e-135
Identity = 226/374 (60.43%), Postives = 229/374 (61.23%), Query Frame = 0
Query:   23 PKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-----------------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV---------------------------------------------------------GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGS----------------------------------RNPLRS-------VLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 263
            PK S R  SGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSG KFRPRLNMGERPIANKYRE                                   HA HGVPRHL+AQGVGLWAPHSTRLETRTKESDMCASQRV                                                         GRGGCFVEPSHGIESSKWAIFGKQNWRCGMN KPGYGAQLRANLEPTKGVGRLRQQDGGHG+                                  R P +S        LPTLETAQPEVGSSGWKSTARRVVSGAFP ALENPEDRVPLTPG THNRIRSPR
Sbjct:   28 PKPSGRGHSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGSKFRPRLNMGERPIANKYREGSGWGPAMRPCRMRNGAIRSADRFGARRCLNRGLQHAAHGVPRHLQAQGVGLWAPHSTRLETRTKESDMCASQRVSKPVRRKEADWLDLSRFEHACRDPKDGELCLSGAKPEETLVEARRNTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNWKPGYGAQLRANLEPTKGVGRLRQQDGGHGTPKMDGAEARPYTRPRGKSQASMSRRARWSLQNLGREPGQSGRRCRSWCLPTLETAQPEVGSSGWKSTARRVVSGAFPVALENPEDRVPLTPGHTHNRIRSPR 401          
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: KAG2313788.1 (hypothetical protein Bca52824_016910 [Brassica carinata])

HSP 1 Score: 382 bits (982), Expect = 1.320e-129
Identity = 194/240 (80.83%), Postives = 194/240 (80.83%), Query Frame = 0
Query:   12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQR------------------------------------------VGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 209
            V RSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMC S                                            VGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV
Sbjct:  111 VGRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCESTGFECEHACRDPKDGELCLSGAKPEETLVEARSDTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 350          
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CDY66372.1 (BnaAnng22160D, partial [Brassica napus])

HSP 1 Score: 374 bits (961), Expect = 1.470e-125
Identity = 214/332 (64.46%), Postives = 220/332 (66.27%), Query Frame = 0
Query:   12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV---------------------------------------------------------GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRS 261
            VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE                         HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV                                                         GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV      A+P  G  G KS A   +S     +L+N    +   PGR+  R RS
Sbjct:   89 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRECLKLSGGKRMGAGDASWSDAERSNPHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVSKPVRRKEADWLDPSRCEHACRDPKDGERGRSGAKPEETLVEARSDTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV------ARPIPGRRG-KSQAS--MSRRARRSLQN----LGREPGRSGRRCRS 407          
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CAF2098430.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 361 bits (926), Expect = 2.020e-122
Identity = 176/203 (86.70%), Postives = 182/203 (89.66%), Query Frame = 0
Query:   12 VRRSGPKALDDPKSSTRPQSG-----EASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 209
            VRRS PKALDDPKSS RPQ       +A SATD+AQVPWKGAPERVRAPSCPDPVAPRGA+YE GCLGMQPQSGGKFRPRLNMGERPIANKYREH PHGVPRHL AQG+GLWAPHST LETRTKESDMCASQRVGRGGCFVEPSHGI SSKWAI GKQNWRCGMNRK GYGAQL ANLEPTKG+G LR QDGGHG RNPLR+V
Sbjct:   60 VRRSSPKALDDPKSSMRPQVRRDHPLKAYSATDQAQVPWKGAPERVRAPSCPDPVAPRGAIYELGCLGMQPQSGGKFRPRLNMGERPIANKYREHVPHGVPRHLCAQGIGLWAPHSTCLETRTKESDMCASQRVGRGGCFVEPSHGIGSSKWAILGKQNWRCGMNRKLGYGAQLHANLEPTKGIGPLRPQDGGHGCRNPLRNV 262          
The following BLAST results are available for this feature:
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
CAF2043664.11.380e-19181.66unnamed protein product [Brassica napus][more]
CDY19789.12.500e-17485.32BnaA09g04420D [Brassica napus][more]
CAF2098438.12.340e-16984.91unnamed protein product [Brassica napus][more]
CDY55729.14.460e-14863.85BnaC08g46150D [Brassica napus][more]
CAF2043650.14.920e-14056.07unnamed protein product [Brassica napus][more]
KAG5568993.13.080e-13852.68hypothetical protein H5410_064037 [Solanum commers... [more]
CAF2086468.16.300e-13560.43unnamed protein product [Brassica napus][more]
KAG2313788.11.320e-12980.83hypothetical protein Bca52824_016910 [Brassica car... [more]
CDY66372.11.470e-12564.46BnaAnng22160D, partial [Brassica napus][more]
CAF2098430.12.020e-12286.70unnamed protein product [Brassica napus][more]

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InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availablePANTHERPTHR33220BNAA09G04420D PROTEINcoord: 141..261
coord: 10..101
coord: 106..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold898contigscaffold898:23593..25760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-04-13 .72417
Diamond on OGS1.0 vs NR2022-04-13 .782894
Brassica napus Westar OGS1.02022-04-13 .642364
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Bnascaffold898T0000400WEBnascaffold898T0000400WEBrassica napus WestarmRNAscaffold898 23593..25760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Bnascaffold898T0000400WE-P ID=Bnascaffold898T0000400WE-P|Name=Bnascaffold898T0000400WE|organism=Brassica napus Westar|type=polypeptide|length=302bp
MEADLPCVTARVRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPE
RVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE
HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPS
HGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGH
GSRNPLRSVLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPL
TPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQFRTRRLLAGCLS
C.
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