Bnascaffold898T0000400WE-P (polypeptide) Brassica napus Westar
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CAF2043664.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 541 bits (1394), Expect = 1.380e-191 Identity = 276/338 (81.66%), Postives = 279/338 (82.54%), Query Frame = 0 Query: 12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKY------REHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV------------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQFRTRRLLAGCLSC 301
VRRSGPKALDDPKSS +PQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGE PIANK +H PHGVPRHLRAQGVGLWAPHSTRLETRTKESDM ASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV LPTLET QPEVGSSGWKSTAR VV AFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWA+ SQFRTRRLLAGCLSC
Sbjct: 57 VRRSGPKALDDPKSSAQPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGETPIANKRCCLNRGLQHVPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMYASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVARPIPGRRGKSQASMSRMARWSLQNLGREPGRSSRWCRSRWYLPTLETGQPEVGSSGWKSTARHVVCNAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWAQRSQFRTRRLLAGCLSC 394
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CDY19789.1 (BnaA09g04420D [Brassica napus]) HSP 1 Score: 496 bits (1276), Expect = 2.500e-174 Identity = 250/293 (85.32%), Postives = 250/293 (85.32%), Query Frame = 0 Query: 12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV-----------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 263
V R GPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR
Sbjct: 57 VSRFGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVARPIPGRRGKSQASMSRRARRSLQNLGREPGRSGRRGRSWCLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 349
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CAF2098438.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 481 bits (1238), Expect = 2.340e-169 Identity = 242/285 (84.91%), Postives = 250/285 (87.72%), Query Frame = 0 Query: 12 VRRSGPKALDDPKSSTRPQSG--EASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRA-----QGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQF 289
VRRSGPKALDDPKSSTRPQ + SSATDRAQ PWKGAPERVR+PSCPDPVA RGAVYESGCLGMQPQSGGKFRPRLNMGERPIAN Y EH PHG + +G +WA +STRLETRT ESDMCASQ V RGGCFVEPSHGIESSKWAIFGKQNWRCGMN+KPGYGAQL ANLEPTKGVGRLRQ D GHGSRNPLRSVLPTLETAQ EVGSSGWKSTAR +VSG FPAALEN EDRVPLTPGRTHNRIRSPRQGKSAKWI NFGKRIGSEGWARGSQF
Sbjct: 13 VRRSGPKALDDPKSSTRPQKRPQQTSSATDRAQAPWKGAPERVRSPSCPDPVAQRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANTYHEHTPHGGTSTMSFPVIYDRGCHMWALYSTRLETRTNESDMCASQWVRRGGCFVEPSHGIESSKWAIFGKQNWRCGMNQKPGYGAQLSANLEPTKGVGRLRQHDSGHGSRNPLRSVLPTLETAQSEVGSSGWKSTARCMVSGVFPAALENLEDRVPLTPGRTHNRIRSPRQGKSAKWICNFGKRIGSEGWARGSQF 297
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CDY55729.1 (BnaC08g46150D [Brassica napus]) HSP 1 Score: 434 bits (1115), Expect = 4.460e-148 Identity = 242/379 (63.85%), Postives = 243/379 (64.12%), Query Frame = 0 Query: 12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-----------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV---------------------------------------------------------GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV-----------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 263
V R GP LDDPKSSTRPQSGEASSATDRAQVPWK APERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLN G+RPIANKYRE HAP GVPRHLRAQGVGLWAPHST LETRTKESDMCASQ V GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR
Sbjct: 89 VGRFGPIGLDDPKSSTRPQSGEASSATDRAQVPWKRAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNRGDRPIANKYREGSGWGPAMRPGQMRNRAIRSADRFGAWTDHAPRGVPRHLRAQGVGLWAPHSTCLETRTKESDMCASQLVSKPVRRKEADWLDPSRCEHACRDPKDGELCLSGAKPEETLVEARSDTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVARPIPGRRGKSQASMSRKARRSLQNLGREPGRSGRRCRSWCLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 467
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CAF2043650.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 414 bits (1063), Expect = 4.920e-140 Identity = 240/428 (56.07%), Postives = 260/428 (60.75%), Query Frame = 0 Query: 12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRG-----GCFVEPSH---------------------------------------------------GIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDG----------------GHGSRNPLRSV-----------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQFRTRRLLAGCLSC 301
VRRS PKALDDP+SSTRPQSGEASSA +AQVPWKGAPERVR+PSCP+P+APRG +YESGCLGMQPQS GKFRPRLN+GERPIANKY E HAPHGVPRHLRA+GVGLWAP+STRLETRTKESD+CASQRV + ++PS IESSKWAIFGK+NW+C MNRKP Y AQLRANLEPTKGVGRLR+QDG GHGS+NPLRSV LPTLETAQPEVGSS WKSTA VVSGAF ALENP+D+V LT GRTHNRIR +SAKWI NFGKRIGSEGWARGSQFRT RLLAGCLSC
Sbjct: 56 VRRSCPKALDDPESSTRPQSGEASSAAGQAQVPWKGAPERVRSPSCPNPIAPRGTIYESGCLGMQPQSSGKFRPRLNVGERPIANKYHECLKLSGGKRMGAGDSSRSDAERSNPHAPHGVPRHLRAKGVGLWAPYSTRLETRTKESDICASQRVSKPVRRKEADLLDPSRCEHACRDPKDGEQCLSGAKPEETLVEARSDTDVQIVRLIWVGRVAALLSHPRIESSKWAIFGKRNWQCRMNRKPRYAAQLRANLEPTKGVGRLRRQDGFFSTKILSAREGYYNGGHGSQNPLRSVARHIPGRRGKSQASMSRRAQWLLQNLGREPKRSGHRCRSWCLPTLETAQPEVGSSIWKSTAHHVVSGAFRVALENPKDQVLLTRGRTHNRIR-----ESAKWIHNFGKRIGSEGWARGSQFRTHRLLAGCLSC 478
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: KAG5568993.1 (hypothetical protein H5410_064037 [Solanum commersonii]) HSP 1 Score: 423 bits (1087), Expect = 3.080e-138 Identity = 246/467 (52.68%), Postives = 254/467 (54.39%), Query Frame = 0 Query: 28 RPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-------------------------------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQR--------------------------------------------------------VGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLR----------------------------------------------------------------------------------------SVLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQFRTRRLLAGCLSC 301
RPQSGEASS DRAQVPWKGAPERVRAP CPDPVAPRGAVYESGCLGMQP+SGG+FRPRLN GERPIANKYRE HAP GVPRHLRA G GL PHS RLETRTKESDMCASQR VGR GCFVEP HGI+SSKWAIFGKQNWRCGMNRKPGYGA+LRANL+PTKGVGRLRQQDGGHGSRNPLR + LPTLE+AQPEVGSSGWKSTARRVVSGA PAALENPEDR+P TPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQ RTRRL C SC
Sbjct: 312 RPQSGEASSVADRAQVPWKGAPERVRAPLCPDPVAPRGAVYESGCLGMQPKSGGEFRPRLNTGERPIANKYREGKMKRTLKRESKTGPPIGSGCGPVRIGAAAKARALDTPVETPSRRLWWQHAPLGVPRHLRAPGTGLRVPHSARLETRTKESDMCASQRGSKPVRRKEADWRDPPCEHSCRDPKDGELCLSGAKPEETLVEARSDTDVQIVRLTWVGRRGCFVEPRHGIKSSKWAIFGKQNWRCGMNRKPGYGAKLRANLDPTKGVGRLRQQDGGHGSRNPLRIGGRGGRCKTLGASLGGAAVGADLGGSSKYSNENFEGRRGERFHVNGTCTWIARFARTPKGNRVKIPEPGRGVRRRRREPREELSFLFNSLPTLESAQPEVGSSGWKSTARRVVSGALPAALENPEDRMPSTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQSRTRRLSVDCSSC 778
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CAF2086468.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 398 bits (1022), Expect = 6.300e-135 Identity = 226/374 (60.43%), Postives = 229/374 (61.23%), Query Frame = 0 Query: 23 PKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-----------------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV---------------------------------------------------------GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGS----------------------------------RNPLRS-------VLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 263
PK S R SGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSG KFRPRLNMGERPIANKYRE HA HGVPRHL+AQGVGLWAPHSTRLETRTKESDMCASQRV GRGGCFVEPSHGIESSKWAIFGKQNWRCGMN KPGYGAQLRANLEPTKGVGRLRQQDGGHG+ R P +S LPTLETAQPEVGSSGWKSTARRVVSGAFP ALENPEDRVPLTPG THNRIRSPR
Sbjct: 28 PKPSGRGHSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGSKFRPRLNMGERPIANKYREGSGWGPAMRPCRMRNGAIRSADRFGARRCLNRGLQHAAHGVPRHLQAQGVGLWAPHSTRLETRTKESDMCASQRVSKPVRRKEADWLDLSRFEHACRDPKDGELCLSGAKPEETLVEARRNTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNWKPGYGAQLRANLEPTKGVGRLRQQDGGHGTPKMDGAEARPYTRPRGKSQASMSRRARWSLQNLGREPGQSGRRCRSWCLPTLETAQPEVGSSGWKSTARRVVSGAFPVALENPEDRVPLTPGHTHNRIRSPR 401
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: KAG2313788.1 (hypothetical protein Bca52824_016910 [Brassica carinata]) HSP 1 Score: 382 bits (982), Expect = 1.320e-129 Identity = 194/240 (80.83%), Postives = 194/240 (80.83%), Query Frame = 0 Query: 12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQR------------------------------------------VGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 209
V RSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMC S VGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV
Sbjct: 111 VGRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCESTGFECEHACRDPKDGELCLSGAKPEETLVEARSDTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 350
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CDY66372.1 (BnaAnng22160D, partial [Brassica napus]) HSP 1 Score: 374 bits (961), Expect = 1.470e-125 Identity = 214/332 (64.46%), Postives = 220/332 (66.27%), Query Frame = 0 Query: 12 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV---------------------------------------------------------GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRS 261
VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV A+P G G KS A +S +L+N + PGR+ R RS
Sbjct: 89 VRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRECLKLSGGKRMGAGDASWSDAERSNPHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVSKPVRRKEADWLDPSRCEHACRDPKDGERGRSGAKPEETLVEARSDTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV------ARPIPGRRG-KSQAS--MSRRARRSLQN----LGREPGRSGRRCRS 407
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Match: CAF2098430.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 361 bits (926), Expect = 2.020e-122 Identity = 176/203 (86.70%), Postives = 182/203 (89.66%), Query Frame = 0 Query: 12 VRRSGPKALDDPKSSTRPQSG-----EASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 209
VRRS PKALDDPKSS RPQ +A SATD+AQVPWKGAPERVRAPSCPDPVAPRGA+YE GCLGMQPQSGGKFRPRLNMGERPIANKYREH PHGVPRHL AQG+GLWAPHST LETRTKESDMCASQRVGRGGCFVEPSHGI SSKWAI GKQNWRCGMNRK GYGAQL ANLEPTKG+G LR QDGGHG RNPLR+V
Sbjct: 60 VRRSSPKALDDPKSSMRPQVRRDHPLKAYSATDQAQVPWKGAPERVRAPSCPDPVAPRGAIYELGCLGMQPQSGGKFRPRLNMGERPIANKYREHVPHGVPRHLCAQGIGLWAPHSTCLETRTKESDMCASQRVGRGGCFVEPSHGIGSSKWAILGKQNWRCGMNRKLGYGAQLHANLEPTKGIGPLRPQDGGHGCRNPLRNV 262 The following BLAST results are available for this feature:
BLAST of Bnascaffold898T0000400WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Bnascaffold898T0000400WE-P ID=Bnascaffold898T0000400WE-P|Name=Bnascaffold898T0000400WE|organism=Brassica napus Westar|type=polypeptide|length=302bpback to top |