Bnascaffold789T0000100WE-P (polypeptide) Brassica napus Westar
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Match: VDC97062.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 139 bits (351), Expect = 1.350e-41 Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0 Query: 1 MERCYKKGEAQMVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 69 MERCYKKGEA MVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR Sbjct: 1 MERCYKKGEAHMVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 69
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Match: KAG5373883.1 (hypothetical protein IGI04_042800, partial [Brassica rapa subsp. trilocularis]) HSP 1 Score: 136 bits (342), Expect = 1.760e-38 Identity = 66/68 (97.06%), Postives = 66/68 (97.06%), Query Frame = 0 Query: 1 MERCYKKGEAQMVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIV 68 MERCYKKGEA MVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKA SIV Sbjct: 8 MERCYKKGEAHMVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAVSIV 75
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Match: KAG5374178.1 (hypothetical protein IGI04_042510 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 117 bits (294), Expect = 4.580e-32 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 Query: 12 MVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 69 MVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR Sbjct: 1 MVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 58
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Match: KAG5373869.1 (hypothetical protein IGI04_042810 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 115 bits (287), Expect = 1.430e-30 Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0 Query: 6 KKGEAQMVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 69 KK MVVKLTG LLLNIASTRRR+QPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAAS+VR Sbjct: 30 KKKLKGMVVKLTGALLLNIASTRRRNQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASMVR 93
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Match: KAG5385204.1 (hypothetical protein IGI04_036674 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 112 bits (280), Expect = 1.540e-28 Identity = 58/69 (84.06%), Postives = 59/69 (85.51%), Query Frame = 0 Query: 1 MERCYKKGEAQMVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 69 ME+CYKKGEAQMVVKLTGVLLLNIAS SGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR Sbjct: 8 MEKCYKKGEAQMVVKLTGVLLLNIAS----------SGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 66
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Match: KAG2255659.1 (hypothetical protein Bca52824_074953 [Brassica carinata]) HSP 1 Score: 104 bits (260), Expect = 1.190e-27 Identity = 55/69 (79.71%), Postives = 56/69 (81.16%), Query Frame = 0 Query: 1 MERCYKKGEAQMVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 69 MERCYKKGEAQMVVKLT VLLLNIAST + IQEGAQTKTEHSWLCEEEGYSIKAASIVR Sbjct: 7 MERCYKKGEAQMVVKLTSVLLLNIASTEEERTCPVSMRF-IQEGAQTKTEHSWLCEEEGYSIKAASIVR 74
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Match: KAF3592119.1 (hypothetical protein DY000_02022244 [Brassica cretica]) HSP 1 Score: 91.7 bits (226), Expect = 1.910e-21 Identity = 49/69 (71.01%), Postives = 51/69 (73.91%), Query Frame = 0 Query: 1 MERCYKKGEAQMVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 69 ME CYKK + + VLLL IAS RRSQPGL SGV IQE AQTKTEHSWLCEEEGYSIK AS VR Sbjct: 96 MESCYKKATLGV---MRPVLLLTIASNWRRSQPGLVSGVSIQESAQTKTEHSWLCEEEGYSIKEASSVR 161
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Match: KAF2552968.1 (hypothetical protein F2Q68_00034435 [Brassica cretica]) HSP 1 Score: 91.7 bits (226), Expect = 1.020e-20 Identity = 49/69 (71.01%), Postives = 51/69 (73.91%), Query Frame = 0 Query: 1 MERCYKKGEAQMVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 69 ME CYKK + + VLLL IAS RRSQPGL SGV IQE AQTKTEHSWLCEEEGYSIK AS VR Sbjct: 96 MESCYKKATLGV---MRPVLLLTIASNWRRSQPGLVSGVSIQESAQTKTEHSWLCEEEGYSIKEASSVR 161
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Match: KAG5373732.1 (hypothetical protein IGI04_042950 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 90.1 bits (222), Expect = 1.100e-20 Identity = 46/69 (66.67%), Postives = 50/69 (72.46%), Query Frame = 0 Query: 1 MERCYKKGEAQMVVKLTGVLLLNIASTRRRSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 69 MERCYKKGEA MV + ++ GLGSGVPIQEGAQTKTE+ WLCEEEGYSIKAASIVR Sbjct: 44 MERCYKKGEAHMVYQ-------------KKKPTGLGSGVPIQEGAQTKTENFWLCEEEGYSIKAASIVR 99
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Match: KAG5374410.1 (hypothetical protein IGI04_042260 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 77.8 bits (190), Expect = 3.040e-15 Identity = 37/40 (92.50%), Postives = 37/40 (92.50%), Query Frame = 0 Query: 30 RSQPGLGSGVPIQEGAQTKTEHSWLCEEEGYSIKAASIVR 69 RSQPGLGSGV IQE AQTKTEHSWLCEEEGYSIKAAS VR Sbjct: 122 RSQPGLGSGVLIQESAQTKTEHSWLCEEEGYSIKAASSVR 161 The following BLAST results are available for this feature:
BLAST of Bnascaffold789T0000100WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR) Total hits: 13 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Bnascaffold789T0000100WE-P ID=Bnascaffold789T0000100WE-P|Name=Bnascaffold789T0000100WE|organism=Brassica napus Westar|type=polypeptide|length=70bpback to top |