Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BnaA01G0065900WE | BnaA01G0065900WE | Brassica napus Westar | gene | westarv0_A01 4524363..4524789 - |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BnaA01T0065900WE.exon2 | BnaA01T0065900WE.exon2 | Brassica napus Westar | exon | westarv0_A01 4524363..4524478 - |
| BnaA01T0065900WE.exon1 | BnaA01T0065900WE.exon1 | Brassica napus Westar | exon | westarv0_A01 4524696..4524789 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| cds.BnaA01T0065900WE | cds.BnaA01T0065900WE | Brassica napus Westar | CDS | westarv0_A01 4524696..4524789 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BnaA01T0065900WE ID=BnaA01T0065900WE|Name=BnaA01T0065900WE|organism=Brassica napus Westar|type=mRNA|length=210bp|location=Sequence derived from alignment at westarv0_A01:4524363..4524789- (Brassica napus Westar)|Notes=Excludes all bases but those of type(s): exon.
ATGGATGCCATCGATTCAGTCGTCGATCCTCTAAGAGACTTTGCGAAGGA
CAGCATTCGTCTCGTTAAACGTTGTCACAAACCAGATCGCAAAGAATTCA
CGAAAGTGGCGGTCCGTACAGCTATTGGGTTTGTGGTGATGGGATTCGTG
GGATTCTTTGTGAAGCTCATCTTTATTCCCATCAACAACATCATCGTCGG
TGCTACCTAA back to topprotein sequence of BnaA01T0065900WE >BnaA01T0065900WE-P ID=BnaA01T0065900WE-P|Name=BnaA01T0065900WE|organism=Brassica napus Westar|type=polypeptide|length=70bp
MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFV
GFFVKLIFIPINNIIVGAT. back to topmRNA from alignment at westarv0_A01:4524363..4524789- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BnaA01T0065900WE ID=BnaA01T0065900WE|Name=BnaA01T0065900WE|organism=Brassica napus Westar|type=mRNA|length=427bp|location=Sequence derived from alignment at westarv0_A01:4524363..4524789- (Brassica napus Westar)
ATGGATGCCATCGATTCAGTCGTCGATCCTCTAAGAGACTTTGCGAAGGA
CAGCATTCGTCTCGTTAAACGTTGTCACAAACCAGATCGCAAAGGTAATT
GAACGAGCTCGGTCTTTCCGTGTCTTTTAGATAGTTATGCATGAGCGATC
TCTGTGTGTTTTAATCATCTGATGTAGTGGATCTATCGTTATTTTATTGC
GGATTGGAAGATCTGTATGTTGAATGGAGAGAGAGAGAGAGAGATCCGTG
TTGTTGTTGTCCGTTATGGAGAAGATTAGTCTGATTCTGTGTGTTTCTTT
TTGGTTGTAAGAATTCACGAAAGTGGCGGTCCGTACAGCTATTGGGTTTG
TGGTGATGGGATTCGTGGGATTCTTTGTGAAGCTCATCTTTATTCCCATC
AACAACATCATCGTCGGTGCTACCTAA back to topCoding sequence (CDS) from alignment at westarv0_A01:4524363..4524789- >BnaA01T0065900WE ID=BnaA01T0065900WE|Name=BnaA01T0065900WE|organism=Brassica napus Westar|type=CDS|length=210bp|location=Sequence derived from alignment at westarv0_A01:4524363..4524789- (Brassica napus Westar)
ATGGATGCCATCGATTCAGTCGTCGATCCTCTAAGAGACTTTGCGAAGGA
CAGCATTCGTCTCGTTAAACGTTGTCACAAACCAGATCGCAAAGAATTCA
CGAAAGTGGCGGTCCGTACAGCTATTGGGTTTGTGGTGATGGGATTCGTG
GGATTCTTTGTGAAGCTCATCTTTATTCCCATCAACAACATCATCGTCGG
TGCTACCTAA back to top
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