Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BnaA01G0010900WE | BnaA01G0010900WE | Brassica napus Westar | gene | westarv0_A01 694109..695259 + |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BnaA01T0010900WE.exon1 | BnaA01T0010900WE.exon1 | Brassica napus Westar | exon | westarv0_A01 694109..694351 + |
| BnaA01T0010900WE.exon2 | BnaA01T0010900WE.exon2 | Brassica napus Westar | exon | westarv0_A01 695023..695259 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| cds.BnaA01T0010900WE | cds.BnaA01T0010900WE | Brassica napus Westar | CDS | westarv0_A01 694109..694351 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BnaA01T0010900WE ID=BnaA01T0010900WE|Name=BnaA01T0010900WE|organism=Brassica napus Westar|type=mRNA|length=480bp|location=Sequence derived from alignment at westarv0_A01:694109..695259+ (Brassica napus Westar)|Notes=Excludes all bases but those of type(s): exon.
ATGGGGTTCTTAAAGAAGCTCGCGGGCGTGTTTGGATTTGGGCAGGAAGC
TGTAAAGAATGAGGAAGACGATACAGTCATCGATTCCGGCGACGGAGATA
AGCGGCGGGAGAATAACCAGCCGAGATTTCGTGAAACCGGACAACCCAGG
AAAGGATTTGGAGTTCCGGTTCAAGTCGCCGTCGAAAGGTCTCAACTTGG
TCCTGTTCTTCAGCCTTGCTCCGCCGGAGACGGTGGTATTCAGGGACTAA
GGTGGTATACAAAACGGTCAAGGGTTGATGAAGATGGAGATGTCGCGGAT
GAGTTTTTGGAAGAGGGAGACAACCCGACAAACGCAGAAGATGATCATAG
CTCTAAGACAATGCCAAGGCTTGAGGCGAAACGCAAAACAAAACCTGCTA
AAGTAAGAAGACTGGTTGTGTCTTCTGATGGTAAACTCAAGCAATGCATT
GAACATCAAGGAAGATTATTTATAGTATGA back to topprotein sequence of BnaA01T0010900WE >BnaA01T0010900WE-P ID=BnaA01T0010900WE-P|Name=BnaA01T0010900WE|organism=Brassica napus Westar|type=polypeptide|length=160bp
MGFLKKLAGVFGFGQEAVKNEEDDTVIDSGDGDKRRENNQPRFRETGQPR
KGFGVPVQVAVERSQLGPVLQPCSAGDGGIQGLRWYTKRSRVDEDGDVAD
EFLEEGDNPTNAEDDHSSKTMPRLEAKRKTKPAKVRRLVVSSDGKLKQCI
EHQGRLFIV. back to topmRNA from alignment at westarv0_A01:694109..695259+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BnaA01T0010900WE ID=BnaA01T0010900WE|Name=BnaA01T0010900WE|organism=Brassica napus Westar|type=mRNA|length=1151bp|location=Sequence derived from alignment at westarv0_A01:694109..695259+ (Brassica napus Westar)
ATGGGGTTCTTAAAGAAGCTCGCGGGCGTGTTTGGATTTGGGCAGGAAGC
TGTAAAGAATGAGGAAGACGATACAGTCATCGATTCCGGCGACGGAGATA
AGCGGCGGGAGAATAACCAGCCGAGATTTCGTGAAACCGGACAACCCAGG
AAAGGATTTGGAGTTCCGGTTCAAGTCGCCGTCGAAAGGTCTCAACTTGG
TCCTGTTCTTCAGCCTTGCTCCGCCGGAGACGGTGGTATTCAGGTTTTTT
ATTTTTTTTTTTGAATTTTTCCGATCCTTGACTTAGTTTGATTACTTGTT
GATTGCTTTACTGGAGTCTGGAACTTGACTTACGAGTTCTCTAGTTAGCT
TAAGTACAAAACTCCCAAAACATTTAGCTTTCTGATCGAGTAGGTTCGTT
TGAAGATGTGAACTAGCAAAAAAAAAAGATTCCTTCTTTAACCGTTACTA
ATCATAGATCATGTGAAGTTACTAGAAAAGATTCCTTCTTTAACCGTTAC
TAATCGTAGATAATGGTTCTACATATAGTCCTTGGCTTAATTTCTTAGTT
TGGTTTACAAAAATTGGTTTTGTCTCTTCTTCAGCGGCAGCATTACCTCA
GTTGCTCTAGCTTAGATTGCTTAGAATGGTAGAGTAGTAGACATGCAGAC
AATATGTAGAAACCAAGTACTCCAATTATCACTTGCTCTGTAGTGGAAGC
CAAACTATAATCTTTTCTATGACTTAATTGCAATAATCAGTTTCAAACGA
ATCCTGGTTTTGGTGTGGTTTTCTCCAGTAATCTGATTTCCAGTGTTAGA
TTGTGAAGACGTGTTGTGGAGTTTACTTAGTTAAGAGATCGTATTATCTT
CTTCTTGTGTATTTTGTTCTTTTTCCTACACACTGTGTTATAGTTTTCTC
TTGTTTTGAATAAGGGACTAAGGTGGTATACAAAACGGTCAAGGGTTGAT
GAAGATGGAGATGTCGCGGATGAGTTTTTGGAAGAGGGAGACAACCCGAC
AAACGCAGAAGATGATCATAGCTCTAAGACAATGCCAAGGCTTGAGGCGA
AACGCAAAACAAAACCTGCTAAAGTAAGAAGACTGGTTGTGTCTTCTGAT
GGTAAACTCAAGCAATGCATTGAACATCAAGGAAGATTATTTATAGTATG
A back to topCoding sequence (CDS) from alignment at westarv0_A01:694109..695259+ >BnaA01T0010900WE ID=BnaA01T0010900WE|Name=BnaA01T0010900WE|organism=Brassica napus Westar|type=CDS|length=480bp|location=Sequence derived from alignment at westarv0_A01:694109..695259+ (Brassica napus Westar)
ATGGGGTTCTTAAAGAAGCTCGCGGGCGTGTTTGGATTTGGGCAGGAAGC
TGTAAAGAATGAGGAAGACGATACAGTCATCGATTCCGGCGACGGAGATA
AGCGGCGGGAGAATAACCAGCCGAGATTTCGTGAAACCGGACAACCCAGG
AAAGGATTTGGAGTTCCGGTTCAAGTCGCCGTCGAAAGGTCTCAACTTGG
TCCTGTTCTTCAGCCTTGCTCCGCCGGAGACGGTGGTATTCAGGGACTAA
GGTGGTATACAAAACGGTCAAGGGTTGATGAAGATGGAGATGTCGCGGAT
GAGTTTTTGGAAGAGGGAGACAACCCGACAAACGCAGAAGATGATCATAG
CTCTAAGACAATGCCAAGGCTTGAGGCGAAACGCAAAACAAAACCTGCTA
AAGTAAGAAGACTGGTTGTGTCTTCTGATGGTAAACTCAAGCAATGCATT
GAACATCAAGGAAGATTATTTATAGTATGA back to top
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