Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BnaA01G0000200WE | BnaA01G0000200WE | Brassica napus Westar | gene | westarv0_A01 8943..10746 - |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| cds.BnaA01T0000200WE | cds.BnaA01T0000200WE | Brassica napus Westar | CDS | westarv0_A01 10423..10746 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BnaA01T0000200WE ID=BnaA01T0000200WE|Name=BnaA01T0000200WE|organism=Brassica napus Westar|type=mRNA|length=927bp|location=Sequence derived from alignment at westarv0_A01:8943..10746- (Brassica napus Westar)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGTTGTCGTCTTACCTAAGCCCAACGCGCCTTCTTGAAGGCTACCT
CCGCCGCTGCCTCACGGCGGCAGGACTCACGTCGCAGACTCTTTCCATAG
ATTCTGAAACAACCATCCACTTCTGGGGTCCATCATCTGTAGACCACAGC
ATCGATGACAGACCGGTGATGCTTCTCCTTCACGGCTTCGGTCCATCTGC
CATGTGGCAGTGGCGAAGACAGATTCAAGCCTTCTCACCGTCTGTGTTCC
GGGTATATTGTCCTGATCTTGTTTTCTTTGGTGACTCTACCACTTCATCC
ACCAATCGTTCCGAGGTCTTCCAGGCGGAGTGTATGGCAAAGCTAATGGA
GAAACTAGGAATAGAGAAGAAGTTTAATGTAGTTGGAACAAGCTATGGCG
GATTTGTGGCGTACCATATGGCAAAAATGTGGCCTGAAAAAGTGGAGAAA
GTAGTGATTGCAAGCTCCGGCATCAACATGAGAACGTGTGACAGTGAAAG
TTTATTGCAAAGGTCGAACTGTGAGTGCATTGAGAAAGTTATGTTACCAT
CTACTGCGTCCGAGCTTCGGACACTTATGGGTTTGGCATCTTCTTGGAGG
ATGCTTCGTATGTTTCCTGATGCTCTCTGGAATGACTTCATTAGTAATTT
ATATCAAAAGAATAGAAAAGAGAAAGTAGAATTATTGAAGGGGTTGACTC
TTGGCAGGGAGGAGAAATTAAACATCGAACCTCTTTCTCAGGGGATCCTA
ATAATATGGGGAGATAAAGATCAGATATTTCCCGTGAAGATGGCCTACGA
ACTAAAAGAGATTCTTGGAGATAAGACAAAACTGGAAATCATTGAGAACA
CTTCACATATTCCCCAAATCGAATGTGCCCAAGAGTTCAACAACGTCGTT
TTGAGATTTTTGAAAGGATCTCAATAG back to topprotein sequence of BnaA01T0000200WE >BnaA01T0000200WE-P ID=BnaA01T0000200WE-P|Name=BnaA01T0000200WE|organism=Brassica napus Westar|type=polypeptide|length=309bp
MSLSSYLSPTRLLEGYLRRCLTAAGLTSQTLSIDSETTIHFWGPSSVDHS
IDDRPVMLLLHGFGPSAMWQWRRQIQAFSPSVFRVYCPDLVFFGDSTTSS
TNRSEVFQAECMAKLMEKLGIEKKFNVVGTSYGGFVAYHMAKMWPEKVEK
VVIASSGINMRTCDSESLLQRSNCECIEKVMLPSTASELRTLMGLASSWR
MLRMFPDALWNDFISNLYQKNRKEKVELLKGLTLGREEKLNIEPLSQGIL
IIWGDKDQIFPVKMAYELKEILGDKTKLEIIENTSHIPQIECAQEFNNVV
LRFLKGSQ. back to topmRNA from alignment at westarv0_A01:8943..10746- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BnaA01T0000200WE ID=BnaA01T0000200WE|Name=BnaA01T0000200WE|organism=Brassica napus Westar|type=mRNA|length=1804bp|location=Sequence derived from alignment at westarv0_A01:8943..10746- (Brassica napus Westar)
ATGTCGTTGTCGTCTTACCTAAGCCCAACGCGCCTTCTTGAAGGCTACCT
CCGCCGCTGCCTCACGGCGGCAGGACTCACGTCGCAGACTCTTTCCATAG
ATTCTGAAACAACCATCCACTTCTGGGGTCCATCATCTGTAGACCACAGC
ATCGATGACAGACCGGTGATGCTTCTCCTTCACGGCTTCGGTCCATCTGC
CATGTGGCAGTGGCGAAGACAGATTCAAGCCTTCTCACCGTCTGTGTTCC
GGGTATATTGTCCTGATCTTGTTTTCTTTGGTGACTCTACCACTTCATCC
ACCAATCGTTCCGAGGTCTTCCAGGTATATATGACTCTTTTGCTTCCACA
TGTTTTCCACTAGGATGATTGGATTTGAACTAGTATTGTTTTCTGGTCAC
GTGAAAAGTAGTTTTAGTAAATATAAAAACAGAAGATTAATTTATTTACA
TATGCCCTTTTAACATATGGGAAAAATATATTGGAACTTAATTCTTAATA
TGATTTTTTTTCTCTTTTTTGTCGACTAATTTGAATTTTATTCTACTTAA
CATATATATATATATATATATTGTAAATTTGTAACTATTCTTAAATTCTA
CTGATTAATATATTTGATATAAATCAAACTTGAAAGGAAACATAAAAGTT
AGTCCATACTGGATGGATATTCTTTAGAAATTTGATGTGTTTGCTCTTTT
TATATCATATATGAACTCATTTTAGTATATAAACACATTCTTATTAGAAA
CAAAAAATAAATTATTAGGCGGAGTGTATGGCAAAGCTAATGGAGAAACT
AGGAATAGAGAAGAAGTTTAATGTAGTTGGAACAAGCTATGGCGGATTTG
TGGCGTACCATATGGCAAAAATGTGGCCTGAAAAAGTGGAGAAAGTAGTG
ATTGCAAGCTCCGGCATCAACATGAGAACGTGTGACAGTGAAAGTTTATT
GCAAAGGTCGAACTGTGAGTGCATTGAGAAAGTTATGTTACCATCTACTG
CGTCCGAGCTTCGGACACTTATGGGTTTGGCATCTTCTTGGAGGATGCTT
CGTATGTTTCCTGATGCTCTCTGGAATGACTTCATTAGTGTAAGTGACTA
AGTATTGTTGGGTGTTGACAATGAGTATCATTGTAACCACATAAATCAAA
CTCTTGTTGACATTTTTTTAGCAAAGATAAACTAATCCAAACAAATAATT
TGGTTACTTTGTATGATTTATGCAGAATTTATATCAAAAGAATAGAAAAG
AGAAAGTAGAATTATTGAAGGGGTTGACTCTTGGCAGGGAGGAGAAATTA
AACATCGAACCTCTTTCTCAGGTACGTGCTTCTCTTTTACTGAACACGTA
AACTTTGTTTTGTAGACGTGATGTAATTCCAAACATGTCTTGGGATGTCT
TTCAAATCAAACGTAGTTTACTTCTAAGTTCTAACAATGAATATGAGTAC
TTAAATGGGAGTCATATGATTAACGTCAATGCATTTTATATACTCTTAGG
GGATCCTAATAATATGGGGAGATAAAGATCAGATATTTCCCGTGAAGATG
GCCTACGAACTAAAAGAGTAAGTACATGAGTATTTCTTGGTCAAGGTTTA
GCGTATATTGTATTAATTTTTTCAAAGATCATTAGTATTCTTAAGCATAT
TCTTTTAAATGTTGCAATGGTTGGTATTTTATGTAGGATTCTTGGAGATA
AGACAAAACTGGAAATCATTGAGAACACTTCACATATTCCCCAAATCGAA
TGTGCCCAAGAGTTCAACAACGTCGTTTTGAGATTTTTGAAAGGATCTCA
ATAG back to topCoding sequence (CDS) from alignment at westarv0_A01:8943..10746- >BnaA01T0000200WE ID=BnaA01T0000200WE|Name=BnaA01T0000200WE|organism=Brassica napus Westar|type=CDS|length=927bp|location=Sequence derived from alignment at westarv0_A01:8943..10746- (Brassica napus Westar)
ATGTCGTTGTCGTCTTACCTAAGCCCAACGCGCCTTCTTGAAGGCTACCT
CCGCCGCTGCCTCACGGCGGCAGGACTCACGTCGCAGACTCTTTCCATAG
ATTCTGAAACAACCATCCACTTCTGGGGTCCATCATCTGTAGACCACAGC
ATCGATGACAGACCGGTGATGCTTCTCCTTCACGGCTTCGGTCCATCTGC
CATGTGGCAGTGGCGAAGACAGATTCAAGCCTTCTCACCGTCTGTGTTCC
GGGTATATTGTCCTGATCTTGTTTTCTTTGGTGACTCTACCACTTCATCC
ACCAATCGTTCCGAGGTCTTCCAGGCGGAGTGTATGGCAAAGCTAATGGA
GAAACTAGGAATAGAGAAGAAGTTTAATGTAGTTGGAACAAGCTATGGCG
GATTTGTGGCGTACCATATGGCAAAAATGTGGCCTGAAAAAGTGGAGAAA
GTAGTGATTGCAAGCTCCGGCATCAACATGAGAACGTGTGACAGTGAAAG
TTTATTGCAAAGGTCGAACTGTGAGTGCATTGAGAAAGTTATGTTACCAT
CTACTGCGTCCGAGCTTCGGACACTTATGGGTTTGGCATCTTCTTGGAGG
ATGCTTCGTATGTTTCCTGATGCTCTCTGGAATGACTTCATTAGTAATTT
ATATCAAAAGAATAGAAAAGAGAAAGTAGAATTATTGAAGGGGTTGACTC
TTGGCAGGGAGGAGAAATTAAACATCGAACCTCTTTCTCAGGGGATCCTA
ATAATATGGGGAGATAAAGATCAGATATTTCCCGTGAAGATGGCCTACGA
ACTAAAAGAGATTCTTGGAGATAAGACAAAACTGGAAATCATTGAGAACA
CTTCACATATTCCCCAAATCGAATGTGCCCAAGAGTTCAACAACGTCGTT
TTGAGATTTTTGAAAGGATCTCAATAG back to top
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