C09p74720.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameC09p74720.1_BnaDARv10-RA
Unique NameC09p74720.1_BnaDARv10-PA
Typepolypeptide
OrganismBrassica napus (cv. Darmor-bzh, rapeseed)
Sequence length212
Homology
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013609774.1 (PREDICTED: uncharacterized protein LOC106316431 [Brassica oleracea var. oleracea] >XP_013609923.1 PREDICTED: uncharacterized protein LOC106316579 [Brassica oleracea var. oleracea] >XP_013732744.1 uncharacterized protein BNACNNG40650D [Brassica napus] >CDY62638.1 BnaCnng40650D [Brassica napus])

HSP 1 Score: 430 bits (1105), Expect = 3.720e-152
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
Query:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211          
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD34881.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 427 bits (1097), Expect = 6.180e-151
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0
Query:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGA GSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFK+QTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211          
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF2536059.1 (hypothetical protein F2Q68_00023622 [Brassica cretica] >KAF2571824.1 hypothetical protein F2Q70_00006944 [Brassica cretica])

HSP 1 Score: 381 bits (979), Expect = 2.390e-133
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFK+QTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 185          
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF3499860.1 (hypothetical protein F2Q69_00045900 [Brassica cretica])

HSP 1 Score: 379 bits (974), Expect = 1.390e-132
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTP HPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFK+QTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPNHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 185          
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF3565901.1 (hypothetical protein DY000_02020010 [Brassica cretica])

HSP 1 Score: 379 bits (973), Expect = 1.970e-132
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFK+QTKGKVIKRFSS DSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSLDSSIDHHPTTRRSQSTSCFGIRIW 185          
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018444436.1 (PREDICTED: uncharacterized protein LOC108816362 [Raphanus sativus])

HSP 1 Score: 337 bits (863), Expect = 1.190e-115
Identity = 163/186 (87.63%), Postives = 174/186 (93.55%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCR-SSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSE P SLRKQDT+TFSHKIPSTKQRFSSPASACPSFRIYY+DGAAGSIPF+WESHPGTPKHPSSELPP LPLTPPPSHFSFS DQ  R  SKKP+KKILALIP RLFWLS GGH NKVKK+SASS+SLSERVLID+NEYH+FK+QTKGKV+KRFSSFDSSIDH+PT RRSQSTSCFGIRIW
Sbjct:    1 MTNGGSERPVSLRKQDTNTFSHKIPSTKQRFSSPASACPSFRIYYYDGAAGSIPFDWESHPGTPKHPSSELPPSLPLTPPPSHFSFSSDQIFRRGSKKPIKKILALIPARLFWLSSGGHNNKVKKMSASSQSLSERVLIDDNEYHLFKFQTKGKVVKRFSSFDSSIDHYPTIRRSQSTSCFGIRIW 186          
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018474575.1 (PREDICTED: uncharacterized protein LOC108845878 [Raphanus sativus])

HSP 1 Score: 283 bits (723), Expect = 7.260e-94
Identity = 155/203 (76.35%), Postives = 167/203 (82.27%), Query Frame = 0
Query:   17 LSLSQSPKTIMTNGGSESPASLR-KQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKH--PSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHK--NKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIR---IW 211
            LS S+SPKT M  GGS+ PASL  KQDT TFS KIPS+K+R SS A ACPSFRIYY+DGAAGSIPFEWESHPGTPKH  PSSELPP LPLTPPP H SFS +Q   SS+KP+KKILALI TRL WLS  GHK  NKV KLSASS SLSERVL+DENEYH+FK QTKGKVI+RFSSFDSSIDH+P  RRSQS SCFGIR   IW
Sbjct:   17 LSRSESPKTTMPTGGSDHPASLMSKQDTATFSDKIPSSKRRLSSQAPACPSFRIYYYDGAAGSIPFEWESHPGTPKHKHPSSELPP-LPLTPPPCHLSFSSEQIRGSSRKPIKKILALIHTRLLWLSSSGHKKNNKVMKLSASSPSLSERVLMDENEYHLFKCQTKGKVIRRFSSFDSSIDHYPI-RRSQSPSCFGIRGCFIW 217          
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Match: NP_195799.2 (hypothetical protein AT5G01790 [Arabidopsis thaliana] >AAR24200.1 At5g01790 [Arabidopsis thaliana] >AAR92330.1 At5g01790 [Arabidopsis thaliana] >AED90392.1 hypothetical protein AT5G01790 [Arabidopsis thaliana])

HSP 1 Score: 279 bits (713), Expect = 1.780e-92
Identity = 150/199 (75.38%), Postives = 165/199 (82.91%), Query Frame = 0
Query:   14 YASLSLSQSPKTIMTNGGSESPASL--RKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSE-SLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIR 209
            + SLSLS SPKTIM N GSE  ASL  +KQDT TFS K+PSTKQRFSS ++ACPSFRIYY+DGAAG++PFEWESHPGTPKHPSSELP   PLTPPPSHFSFSGDQ  R SKK  KKILALIPTRLFWLS G H  K KKLSASS  SLSERVLIDENEY +FK+QT+  V++RFSSFDSS D+    +RSQSTSCFGIR
Sbjct:    8 FPSLSLSHSPKTIMPNAGSERAASLSLKKQDTATFSGKLPSTKQRFSSVSAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRRSKKSTKKILALIPTRLFWLS-GDHNGKAKKLSASSPPSLSERVLIDENEYDLFKFQTERNVMRRFSSFDSSADY--PIQRSQSTSCFGIR 203          
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Match: CAA7033372.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 276 bits (705), Expect = 1.160e-91
Identity = 143/182 (78.57%), Postives = 156/182 (85.71%), Query Frame = 0
Query:   37 SLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKN-KVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSS---IDHHPTTRRSQSTSCFGIR---IW 211
            SLRKQD  TFS K+PS KQRFSSPA+ACPSFRIYY+DGAAGSIPFEWESHPGTPKHPSS+LPP  PLTPPPSHFSFSGDQ  R SKKP+KK+LALIPT LFWLS GGH N KVKKLSASS S+SERVLID+NEYH+FK+QTK KV++RFSSFDSS   ID+    RRSQSTSCFG R   IW
Sbjct:    2 SLRKQDASTFSDKLPSAKQRFSSPATACPSFRIYYYDGAAGSIPFEWESHPGTPKHPSSDLPPLPPLTPPPSHFSFSGDQIRRGSKKPIKKLLALIPTMLFWLSSGGHNNNKVKKLSASSPSVSERVLIDDNEYHLFKFQTKRKVMRRFSSFDSSATSIDY--PIRRSQSTSCFGSRRCFIW 181          
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013651098.1 (uncharacterized protein LOC106355752 [Brassica napus])

HSP 1 Score: 274 bits (701), Expect = 1.910e-90
Identity = 153/204 (75.00%), Postives = 162/204 (79.41%), Query Frame = 0
Query:   16 SLSLSQSPKTIMTNGGSESPASLR-KQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKH--PSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKN--KVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIR---IW 211
            SLSLS  PKT M   GS+  ASL  KQD  TFS KIPSTKQR SS A ACPSFRIYY++GAAGSIPFEWESHPGTPKH  PSSELPP LPLTPPP H SFS +Q  R S+KP+KKILALI TRL WLS GGHK   KV KLSASS SLSERVLIDENEYH+FK  TKGKVI+RFSSFDSSIDH+P  RRSQS SCFGI    IW
Sbjct:   21 SLSLSLPPKTTMPTNGSDRHASLMSKQDMATFSDKIPSTKQRLSSQAPACPSFRIYYYNGAAGSIPFEWESHPGTPKHKHPSSELPP-LPLTPPPCHLSFSSEQIRRGSRKPIKKILALIHTRLLWLSSGGHKKNKKVMKLSASSPSLSERVLIDENEYHLFKSHTKGKVIRRFSSFDSSIDHYPI-RRSQSPSCFGISGCFIW 222          
The following BLAST results are available for this feature:
BLAST of C09p74720.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
XP_013609774.13.720e-152100.00PREDICTED: uncharacterized protein LOC106316431 [B... [more]
VDD34881.16.180e-15199.05unnamed protein product [Brassica oleracea][more]
KAF2536059.12.390e-13399.46hypothetical protein F2Q68_00023622 [Brassica cret... [more]
KAF3499860.11.390e-13298.92hypothetical protein F2Q69_00045900 [Brassica cret... [more]
KAF3565901.11.970e-13298.92hypothetical protein DY000_02020010 [Brassica cret... [more]
XP_018444436.11.190e-11587.63PREDICTED: uncharacterized protein LOC108816362 [R... [more]
XP_018474575.17.260e-9476.35PREDICTED: uncharacterized protein LOC108845878 [R... [more]
NP_195799.21.780e-9275.38hypothetical protein AT5G01790 [Arabidopsis thalia... [more]
CAA7033372.11.160e-9178.57unnamed protein product [Microthlaspi erraticum][more]
XP_013651098.11.910e-9075.00uncharacterized protein LOC106355752 [Brassica nap... [more]

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InterPro
Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33257OS05G0165500 PROTEINcoord: 1..211
NoneNo IPR availablePANTHERPTHR33257:SF37BNACNNG40650D PROTEINcoord: 1..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C09_BnaDARv10contigC09_BnaDARv10:65388625..65389260 -    View in Apollo
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on Darmor-bzh OGS10 v102021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR2021-04-17
Darmor-bzh OGS10 v102020-07-22
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
C09p74720.1_BnaDARv10-RAC09p74720.1_BnaDARv10-RABrassica napusmRNAC09_BnaDARv10 65388401..65389260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>C09p74720.1_BnaDARv10-PA ID=C09p74720.1_BnaDARv10-PA|Name=C09p74720.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=212bp
MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKI
PSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPP
LPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKK
LSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRS
QSTSCFGIRIW.
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