C09p72920.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	C09p72920.1_BnaDARv10-RA
Unique Name	C09p72920.1_BnaDARv10-PA
Type	polypeptide
Organism	Brassica napus (cv. Darmor-bzh, rapeseed)
Sequence length	875

Homology

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BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD34706.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 724 bits (1870), Expect = 1.700e-254
Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0

Query:  457 MYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKVLDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXXKEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLGEEFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRERTK 874
            MYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKVLDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXXKEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLGEEFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRERTK
Sbjct:    1 MYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKVLDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXXKEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLGEEFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRERTK 418

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BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD34702.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 711 bits (1836), Expect = 1.210e-246
Identity = 395/466 (84.76%), Postives = 396/466 (84.98%), Query Frame = 0

Query:    1 MAKRRSWFGWIKRLFICEAKAKSEKPRRLRWVLRRLKLRHQIATPTQETRTLNKATEDQRKHAMNVAIATAAAAEAAVAGLQPPRQLLRLSGWRKTPSLH-NILSRRARKALRXXXXXXXXXXXXXXXXXRRKVSSNKASTSSLIQRKHLSKTKTEIKEELKIPKRSMCNGQNGWDSSALTKEDIKAIRLRKQEGAVKRERMLKYSRSHRRLIICYLIYTFLTRRSPHMLLESLYTTDMGMRSCRLEHWGESKSEMVVVPTK-----------------------------------LLKENILGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTWGYSELACNEAVSLTPWTAGRVIKGVVYWHTTGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ 430
            MAKRRSWFGWIKRLFICEAKAKSEKPRRLRWVLRRLKLRHQIATPTQETRTLNKATEDQRKHAMNVAIATAAAAEAAVAGLQPPRQLL          +  N L     KALR   XXXXXXXXXXXXX RRKVSSNKASTSSLIQRKHLSKTKTEIKEELKIPKRSMCNGQNGWDSSALTKEDIKAIRLRKQEGAVKRERMLKYSRSHR             RRSPHMLLESLYTTDMGMRSCRLEHWGESKSEMVVVPTK                                   LLKENILGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTWGYSELACNEAVSLTPWTAGRVIKGVVYWHTTGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ
Sbjct:    1 MAKRRSWFGWIKRLFICEAKAKSEKPRRLRWVLRRLKLRHQIATPTQETRTLNKATEDQRKHAMNVAIATAAAAEAAVAGLQPPRQLLSTDPNLAAIKIQINDLGSLTVKALRALKXXXXXXXXXXXXXVRRKVSSNKASTSSLIQRKHLSKTKTEIKEELKIPKRSMCNGQNGWDSSALTKEDIKAIRLRKQEGAVKRERMLKYSRSHRE------------RRSPHMLLESLYTTDMGMRSCRLEHWGESKSEMVVVPTKVKLRTLQRQDSGDGQDSPFSFPRRSFNLRNIFVEKLLKENILGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTWGYSELACNEAVSLTPWTAGRVIKGVVYWHTTGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ 454

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BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_022571380.1 (uncharacterized protein LOC111213821 [Brassica napus])

HSP 1 Score: 702 bits (1811), Expect = 7.500e-245
Identity = 417/462 (90.26%), Postives = 418/462 (90.48%), Query Frame = 0

Query:  457 MYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKVLDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXXKEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLG--------------------------------------------EEFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRERTK 874
            MYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKVLDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXXKEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLG                                            +EFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRERTK
Sbjct:    1 MYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKVLDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXXKEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLGGNMVYRGAWDKAARVYKMMWDILIWAFDNRGTGRNLVVFLSSENKEFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRERTK 462

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BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_022567769.1 (uncharacterized protein LOC111211140 [Brassica napus])

HSP 1 Score: 662 bits (1708), Expect = 4.140e-229
Identity = 404/471 (85.77%), Postives = 408/471 (86.62%), Query Frame = 0

Query:  466 STLGYTGCFWDYRDLPIPETPHGINPSLIHLKVLDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSD------EA------------NKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXXKEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLG--------------------------------------------EEFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRERTK 874
            +T+GYTGCFWDYRDLPIPETPHGINPSLIHLKV DALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQS+      EA            NKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXXKEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLG                                            +EFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRERTK
Sbjct:    2 TTMGYTGCFWDYRDLPIPETPHGINPSLIHLKVSDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSNCVISSVEASASVRLMVVMLTNKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXXKEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLGGNMVYRGAWDKAARVYKMMWDILIWAFDNRGTGRNLVVFLSSENKEFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRERTK 472

[Close]

BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Match: CDY10369.1 (BnaCnng02700D [Brassica napus])

HSP 1 Score: 622 bits (1604), Expect = 2.240e-214
Identity = 361/416 (86.78%), Postives = 373/416 (89.66%), Query Frame = 0

Query:  457 MYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKVLDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXX-KEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLGEEFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRE 871
            MYETTLTED +LGYTGCFWDYRDLPIPETPHGINPSLIHLKV DALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLD+ FQS+LDDXXXXXXX      KEAIAKLK  XXXXXXXXXXXXXXXXXXXX   R EVAKATTGV               RSLYFTIKYA+AEENEDHS +MSVFTYGK KTLPSEYSVETPFSL +EFV T AYT+FVDTL +LKE+GYNVLLVQHETESAS YLISSVSSIWLWTSILHHF+SAKDVEVLGMERLKIELQSRGLKCGGTLQER ERLFLLKSTPL+  PKKFLAKRG  XXXXXXX +ILAKRE
Sbjct:    1 MYETTLTEDPSLGYTGCFWDYRDLPIPETPHGINPSLIHLKVSDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLDLLFQSMLDDXXXXXXXGVGEEEKEAIAKLKKVXXXXXXXXXXXXXXXXXXXXAFIRGEVAKATTGV---------------RSLYFTIKYALAEENEDHSDDMSVFTYGKGKTLPSEYSVETPFSLDKEFVNTSAYTEFVDTLFKLKEKGYNVLLVQHETESASEYLISSVSSIWLWTSILHHFNSAKDVEVLGMERLKIELQSRGLKCGGTLQERVERLFLLKSTPLEKFPKKFLAKRGEMXXXXXXXMEILAKRE 401

[Close]

BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_022568407.1 (uncharacterized protein LOC106414899 [Brassica napus])

HSP 1 Score: 607 bits (1565), Expect = 8.600e-208
Identity = 364/460 (79.13%), Postives = 375/460 (81.52%), Query Frame = 0

Query:  457 MYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKVLDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLDVFFQSLLDDXXXXXXXXXXXX-KEAIAKLKXXXXXXXXXXXXXXXXXXXXXXXXXREEVAKATTGVFWDVSDFPLPEGFSVRSLYFTIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLG--------------------------------------------EEFVTTFAYTQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSSAKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFLAKRGXXXXXXXXXNKILAKRE 871
            MYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKV DALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLD+ FQS+LDDXXXXXXX      KEAIAKLK  XXXXXXXXXXXXXXXXXXXX   R EVAKATTGV               RSLYFTIKYA+AEENEDHS +MSVFTYGK KTLPSEYSVETPFSLG                                            +EFV T AYT+FVDTL +LKE+GYNVLLVQHETESAS YLISSVSSIWLWTSILHHF+SAKDVEVLGMERLKIELQSRGLKCGGTLQER ERLFLLKSTPL+  PKKFLAKRG  XXXXXXX +ILAKRE
Sbjct:    1 MYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKVSDALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIKAILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQSDEANKVNIPTLSLDLLFQSMLDDXXXXXXXGVGEEEKEAIAKLKKVXXXXXXXXXXXXXXXXXXXXAFIRGEVAKATTGV---------------RSLYFTIKYALAEENEDHSDDMSVFTYGKGKTLPSEYSVETPFSLGGKMVHRGAWDKAARVYKMMWDILIWSFDNRETGLNLVVNLSLEDKEFVNTSAYTEFVDTLFKLKEKGYNVLLVQHETESASEYLISSVSSIWLWTSILHHFNSAKDVEVLGMERLKIELQSRGLKCGGTLQERVERLFLLKSTPLEKFPKKFLAKRGEMXXXXXXXMEILAKRE 445

[Close]

BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Match: CDY41417.1 (BnaCnng10530D [Brassica napus])

HSP 1 Score: 379 bits (973), Expect = 2.260e-121
Identity = 226/263 (85.93%), Postives = 228/263 (86.69%), Query Frame = 0

Query:    1 MAKRRSWFGWIKRLFICEAKAKSEKPRRLRWVLRRLKLRHQIATPTQETRTLNKATEDQRKHAMNVAIATAAAAEAAVAGLQPPRQLLRLSGWRKTPSLH-NILSRRARKALRXXXXXXXXXXXXXXXXXRRKVSSNKASTSSLIQRKHLSKTKTEIKEELKIPKRSMCNGQNGWDSSALTKEDIKAIRLRKQEGAVKRERMLKYSRSHRRLIICYLIYTFLTRRSPHMLLESLYTTDMGMRSCRLEHWGESKSEMVVVPTKL 262
            MAKRRSWFGWIKRLFICEAKAKSEKPRRLRWVLRRLKLRHQIATPTQETRTLNKATEDQRKHAMNVAIATAAAAEAAVAGLQPPRQLL          +  N L     KALR   XXXXXXXXXXXXX RRKVSSNKASTSSLIQRKHLSKTKTEIKEELKIPKRSMCNGQNGWDSSALTKEDIKAIRLRKQEGAVKRERMLKYSRSHR             RRSPHMLLESLYTTDMGMRSCRLEHWGESKSEMVVVPTK+
Sbjct:    1 MAKRRSWFGWIKRLFICEAKAKSEKPRRLRWVLRRLKLRHQIATPTQETRTLNKATEDQRKHAMNVAIATAAAAEAAVAGLQPPRQLLSTDPNLAAIKIQINDLGSLTVKALRALKXXXXXXXXXXXXXVRRKVSSNKASTSSLIQRKHLSKTKTEIKEELKIPKRSMCNGQNGWDSSALTKEDIKAIRLRKQEGAVKRERMLKYSRSHRE------------RRSPHMLLESLYTTDMGMRSCRLEHWGESKSEMVVVPTKV 251

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BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013730146.2 (F-box protein At5g03970-like isoform X2 [Brassica napus])

HSP 1 Score: 347 bits (891), Expect = 3.500e-107
Identity = 174/216 (80.56%), Postives = 183/216 (84.72%), Query Frame = 0

Query:  218 YTFLTRRSPHMLLESLY---TTDMGMRSCRLEHWGESKSEMVVVPTKLLKENILGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTWGYSELACNEAVSLTPWTAGRVIKGVVYWHTTGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ 430
            + +L R  P+  L   +   T+ +G +         S+S M      LL  + LGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTWGYSELACNEAVSLTPWTAGRVIKGVVYWHTTGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ
Sbjct:   97 HAYLARWKPNFHLIGFFISNTSYVGKKHVERVRRPRSESSM-----PLLSTSSLGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTWGYSELACNEAVSLTPWTAGRVIKGVVYWHTTGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ 307

[Close]

BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013730149.1 (F-box protein At5g03970-like isoform X4 [Brassica napus] >XP_013730150.1 F-box protein At5g03970-like isoform X4 [Brassica napus])

HSP 1 Score: 342 bits (876), Expect = 1.260e-105
Identity = 171/216 (79.17%), Postives = 180/216 (83.33%), Query Frame = 0

Query:  218 YTFLTRRSPHMLLESLY---TTDMGMRSCRLEHWGESKSEMVVVPTKLLKENILGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTWGYSELACNEAVSLTPWTAGRVIKGVVYWHTTGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ 430
            + +L R  P+  L   +   T+ +G +         S+S M      LL  + LGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTW YSEL CNEAVSLTPWTAGRVIKGVVYWH TGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ
Sbjct:   50 HAYLARWKPNFHLIGFFISNTSYVGKKHVERVRRPRSESSM-----PLLSTSSLGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTWSYSELVCNEAVSLTPWTAGRVIKGVVYWHATGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ 260

[Close]

BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013730148.1 (F-box protein At5g03970-like isoform X3 [Brassica napus])

HSP 1 Score: 342 bits (876), Expect = 1.850e-105
Identity = 171/216 (79.17%), Postives = 180/216 (83.33%), Query Frame = 0

Query:  218 YTFLTRRSPHMLLESLY---TTDMGMRSCRLEHWGESKSEMVVVPTKLLKENILGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTWGYSELACNEAVSLTPWTAGRVIKGVVYWHTTGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ 430
            + +L R  P+  L   +   T+ +G +         S+S M      LL  + LGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTW YSEL CNEAVSLTPWTAGRVIKGVVYWH TGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ
Sbjct:   62 HAYLARWKPNFHLIGFFISNTSYVGKKHVERVRRPRSESSM-----PLLSTSSLGDEVETSGALKKLGYYIDSSTGVLLCGRHPKAYYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSYAAHSNKVRVEIYSSKTTTWSYSELVCNEAVSLTPWTAGRVIKGVVYWHATGGKVAIYDTEDEEKRIDVIKLPKTFNYDEQ 272

The following BLAST results are available for this feature:

BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein

BLAST of C09p72920.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDD34706.1	1.700e-254	100.00	unnamed protein product [Brassica oleracea]	[more]
VDD34702.1	1.210e-246	84.76	unnamed protein product [Brassica oleracea]	[more]
XP_022571380.1	7.500e-245	90.26	uncharacterized protein LOC111213821 [Brassica nap...	[more]
XP_022567769.1	4.140e-229	85.77	uncharacterized protein LOC111211140 [Brassica nap...	[more]
CDY10369.1	2.240e-214	86.78	BnaCnng02700D [Brassica napus]	[more]
XP_022568407.1	8.600e-208	79.13	uncharacterized protein LOC106414899 [Brassica nap...	[more]
CDY41417.1	2.260e-121	85.93	BnaCnng10530D [Brassica napus]	[more]
XP_013730146.2	3.500e-107	80.56	F-box protein At5g03970-like isoform X2 [Brassica ...	[more]
XP_013730149.1	1.260e-105	79.17	F-box protein At5g03970-like isoform X4 [Brassica ...	[more]
XP_013730148.1	1.850e-105	79.17	F-box protein At5g03970-like isoform X3 [Brassica ...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 633..671
None	No IPR available	PFAM	PF13297	Telomere_Sde2_2	coord: 795..852 e-value: 1.5E-24 score: 85.3
None	No IPR available	PANTHER	PTHR32295	IQ-DOMAIN 5-RELATED	coord: 1..262
None	No IPR available	PANTHER	PTHR32295:SF198	BNAC02G02790D PROTEIN	coord: 1..262
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 115..142 score: 8.206

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C09_BnaDARv10	contig	C09_BnaDARv10:64210621..64220533 + View in Apollo

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on Darmor-bzh OGS10 v10	2021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR	2021-04-17
Blast2GO on Darmor-bzh OGS10 v10	2021-04-17
Darmor-bzh OGS10 v10	2020-07-22

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
C09p72920.1_BnaDARv10-RA	C09p72920.1_BnaDARv10-RA	Brassica napus	mRNA	C09_BnaDARv10 64210621..64220533 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>C09p72920.1_BnaDARv10-PA ID=C09p72920.1_BnaDARv10-PA|Name=C09p72920.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=875bp
MAKRRSWFGWIKRLFICEAKAKSEKPRRLRWVLRRLKLRHQIATPTQETR
TLNKATEDQRKHAMNVAIATAAAAEAAVAGLQPPRQLLRLSGWRKTPSLH
NILSRRARKALRALKALVRLQAIVRGRAVRRKVSSNKASTSSLIQRKHLS
KTKTEIKEELKIPKRSMCNGQNGWDSSALTKEDIKAIRLRKQEGAVKRER
MLKYSRSHRRLIICYLIYTFLTRRSPHMLLESLYTTDMGMRSCRLEHWGE
SKSEMVVVPTKLLKENILGDEVETSGALKKLGYYIDSSTGVLLCGRHPKA
YYLWDPVTRKQHKIPRHRVHFEEVCMSLITEDCPVEGFSYKVVRGECVSY
AAHSNKVRVEIYSSKTTTWGYSELACNEAVSLTPWTAGRVIKGVVYWHTT
GGKVAIYDTEDEEKRIDVIKLPKTFNYDEQKETSEDRNCDVSFGISQTPT
FFQSKAMYETTLTEDSTLGYTGCFWDYRDLPIPETPHGINPSLIHLKVLD
ALESKLLLGHLAIWFFAEKPIIQDNFEEAQLFFPEGVPKDESERAKMMIK
AILFFALDKDGCGDEHNNLVVVSNTISLEPELVGVLKALEFRNHNVLLVQ
SDEANKVNIPTLSLDVFFQSLLDDDDDDDDDESEEEKEAIAKLKEVIAEK
RRALAKRKNALEKEKNAFIREEVAKATTGVFWDVSDFPLPEGFSVRSLYF
TIKYAIAEENEDHSSEMSVFTYGKRKTLPSEYSVETPFSLGEEFVTTFAY
TQFVDTLLELKERGYNVLLVQHETESASGYLISSVSSIWLWTSILHHFSS
AKDVEVLGMERLKIELQSRGLKCGGTLQERAERLFLLKSTPLDILPKKFL
AKRGEMKREEMKRNKILAKRERTK.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000048	IQ_motif_EF-hand-BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Orthology

View orthology data for C09p72920.1_BnaDARv10-PA

Metabolic Model

View data from metabolic model for C09p72920.1_BnaDARv10-PA