C09p72310.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	C09p72310.1_BnaDARv10-RA
Unique Name	C09p72310.1_BnaDARv10-PA
Type	polypeptide
Organism	Brassica napus (cv. Darmor-bzh, rapeseed)
Sequence length	250

Homology

[Close]

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013729433.1 (uncharacterized protein BNAC09G50560D [Brassica napus] >KAF3499803.1 hypothetical protein F2Q69_00045594 [Brassica cretica] >CDY44856.1 BnaC09g50560D [Brassica napus] >VDD34652.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 433 bits (1113), Expect = 4.120e-152
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0

Query:    1 MALSSATLKLASLSFSAKKTNRNPSLSFTITCSSSFDEPPKPSLTSSSTPNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249
            MALSSATLKLASLSFSAKKTNRNPSLSFTITCSSSFDEPPKPSLTSSSTPNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI
Sbjct:    1 MALSSATLKLASLSFSAKKTNRNPSLSFTITCSSSFDEPPKPSLTSSSTPNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249

[Close]

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009122596.1 (uncharacterized protein SYNPCC7002_A1590 [Brassica rapa] >XP_013668187.1 uncharacterized protein LOC106372510 [Brassica napus] >RID42882.1 hypothetical protein BRARA_J02737 [Brassica rapa] >VDD21091.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 414 bits (1063), Expect = 1.970e-144
Identity = 223/253 (88.14%), Postives = 223/253 (88.14%), Query Frame = 0

Query:    1 MALSSATLKLASLSFSAKKTNRNP---SLSFTITCSSSFDEPPKPSLTSSS-TPNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249
            MALSSATLKL SLSFSAKKTNRNP   SLSFTITCSSSFDEPPKPSLTSSS TPNRVSS S PKARFVARQKQS                     SVLDAERI RVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGS EQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI
Sbjct:    1 MALSSATLKLTSLSFSAKKTNRNPRNRSLSFTITCSSSFDEPPKPSLTSSSSTPNRVSSSSAPKARFVARQKQSVSVRQLQRPLIEYMSLPASQYSVLDAERIERVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSLEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 253

[Close]

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013588592.1 (PREDICTED: uncharacterized protein SYNPCC7002_A1590-like [Brassica oleracea var. oleracea] >XP_013607054.1 PREDICTED: uncharacterized protein SYNPCC7002_A1590-like [Brassica oleracea var. oleracea])

HSP 1 Score: 404 bits (1038), Expect = 1.100e-140
Identity = 236/249 (94.78%), Postives = 236/249 (94.78%), Query Frame = 0

Query:    1 MALSSATLKLASLSFSAKKTNRNPSLSFTITCSSSFDEPPKPSLTSSSTPNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249
            MALSSATLKLASLSFSAKKTNRNPSLSFTITCSSSFDEPPKPSLTSSSTPNRV  X     RFV      XXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI
Sbjct:    1 MALSSATLKLASLSFSAKKTNRNPSLSFTITCSSSFDEPPKPSLTSSSTPNRVXXXXXXXXRFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249

[Close]

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_002871094.1 (uncharacterized protein LOC9309219 [Arabidopsis lyrata subsp. lyrata] >EFH47353.1 hypothetical protein ARALYDRAFT_487226 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 403 bits (1035), Expect = 3.510e-140
Identity = 214/252 (84.92%), Postives = 220/252 (87.30%), Query Frame = 0

Query:    1 MALSSATLKLASLSFSAKKTNRNP---SLSFTITCSSSFDEPPKPSLTSSSTPNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249
            MALSSATL+L SLSFSAKKTNRNP   SLSFTI+ SSSFDEPPKPSL SS+ P RVSS S PKARF+ARQKQS                     SVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCD TQEG+SEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQIL+LMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI
Sbjct:    1 MALSSATLRLTSLSFSAKKTNRNPRNPSLSFTISSSSSFDEPPKPSLASSTPPIRVSSSSTPKARFIARQKQSISVRQLQRPLIEYMSLPASQYSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDSTQEGTSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILKLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 252

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BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018445924.1 (PREDICTED: uncharacterized protein LOC108817669 [Raphanus sativus])

HSP 1 Score: 394 bits (1011), Expect = 1.640e-136
Identity = 216/253 (85.38%), Postives = 217/253 (85.77%), Query Frame = 0

Query:    1 MALSSA-TLKLASLSFSAKKTNRNPSLSFTITCSSS--FDEPPKPSLTSSSTPNRVSSXSD-PKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249
            MALSSA TLKL SLSFSAKK  RNPSLSFTI CSSS  FDEPPKPSLTSS+ P RVSS S  PKARFVARQKQS                     SVLDAERI RVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQ NGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCD TQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI
Sbjct:    1 MALSSAATLKLTSLSFSAKKKTRNPSLSFTINCSSSSSFDEPPKPSLTSSTPPIRVSSSSSSPKARFVARQKQSVSVRQLQRPLIEYMSLPASQYSVLDAERIERVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQTNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDSTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 253

[Close]

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Match: NP_196064.2 (RAP release 2, galactose-binding-like domain protein, putative (DUF1997) [Arabidopsis thaliana] >AAY34156.1 At5g04440 [Arabidopsis thaliana] >ABD19663.1 At5g04440 [Arabidopsis thaliana] >AED90745.1 RAP release 2, galactose-binding-like domain protein, putative (DUF1997) [Arabidopsis thaliana] >OAO94709.1 hypothetical protein AXX17_AT5G03880 [Arabidopsis thaliana] >CAA0400615.1 unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 391 bits (1004), Expect = 2.050e-135
Identity = 214/255 (83.92%), Postives = 218/255 (85.49%), Query Frame = 0

Query:    1 MALSSATLKLASLSFSAKKTNRNP---SLSFTITCSSSFDEPPKPS--LTSSST-PNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249
            MALSSATL+L SLSFSAKKTNRNP   +LSFTIT SSSFDE PKPS   TSSST P RVSS S PKARF+ARQKQS                     SVLDAERI RVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCD TQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQIL+LMLPRFLSQLSKDY AWASGDTSRQPLGTGEI
Sbjct:    1 MALSSATLRLTSLSFSAKKTNRNPRNPALSFTITSSSSFDESPKPSSLATSSSTSPIRVSSSSTPKARFIARQKQSVSVRQLQRPLIEYMSLPASQYSVLDAERIERVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDSTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILKLMLPRFLSQLSKDYHAWASGDTSRQPLGTGEI 255

[Close]

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_006398904.1 (uncharacterized protein LOC18019371 [Eutrema salsugineum] >ESQ40357.1 hypothetical protein EUTSA_v10014494mg [Eutrema salsugineum])

HSP 1 Score: 390 bits (1001), Expect = 4.920e-135
Identity = 213/252 (84.52%), Postives = 217/252 (86.11%), Query Frame = 0

Query:    1 MALSSATLKLASLSFSAKKTNRN---PSLSFTITCSSSFDEPPKPSLTSSSTPNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249
            MALSSATL+   LSFSAKKTNRN   PSLSF ITCSSSFDEP KPS +SS+ P RVSS + PKARFVARQKQS                     SVLDAERI RVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI
Sbjct:    1 MALSSATLR-PFLSFSAKKTNRNIRNPSLSFAITCSSSFDEPSKPS-SSSTPPIRVSSSAAPKARFVARQKQSVSVRQLQRPLIEYMSLPASQYSVLDAERIERVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 250

[Close]

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Match: VVB13202.1 (unnamed protein product [Arabis nemorensis])

HSP 1 Score: 388 bits (997), Expect = 2.480e-134
Identity = 215/256 (83.98%), Postives = 217/256 (84.77%), Query Frame = 0

Query:    1 MALSSATLKLASLSFSAKK-TNRNP---SLSFTITCSSS-FDEPPKPSLTSSST--PNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249
            MALSSATLK  SLSFS KK TNRNP   SLSF ITCSSS FDEPPKPSL SSST  P RVSS S PKARFVARQKQS                     SVLDAERI RVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCD  +EGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQIL+LMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI
Sbjct:    1 MALSSATLKPTSLSFSTKKKTNRNPKNPSLSFAITCSSSSFDEPPKPSLASSSTTPPIRVSSSSSPKARFVARQKQSVSVRQLQRPLIEYMSLPASQYSVLDAERIERVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDSIREGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILKLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 256

[Close]

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Match: CAA7033929.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 385 bits (990), Expect = 2.680e-133
Identity = 208/254 (81.89%), Postives = 215/254 (84.65%), Query Frame = 0

Query:    1 MALSSATLKLASLSFSAKK-TNRNPSLSFTITCSSSFDEPPKPSLTSSST----PNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249
            MALSSAT +L SLSFSAKK TNRNP LSF ITCSSS+DE PKPS  +SS+    P RVSS S PKARFV+R KQS                     SVLDAERI R+DDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCD T+EGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI
Sbjct:    1 MALSSATHRLTSLSFSAKKKTNRNPPLSFAITCSSSYDESPKPSSLASSSSSTPPIRVSSSSVPKARFVSRHKQSVSVRQLQRPLIEYMSLPASQYSVLDAERIERIDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDSTEEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 254

[Close]

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_010452341.1 (PREDICTED: uncharacterized protein LOC104734455 [Camelina sativa])

HSP 1 Score: 384 bits (986), Expect = 1.050e-132
Identity = 210/255 (82.35%), Postives = 215/255 (84.31%), Query Frame = 0

Query:    1 MALSSATLK---LASLSFSAKKTNRNP---SLSFTITCSSSFDEPPKPSLTSSSTPNRVSSXSDPKARFVARQKQSXXXXXXXXXXXXXXXXXXXXXSVLDAERIVRVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 249
            MALSSA+L      SLS SAKKTNRNP   SLSFTIT SSSFDEPPKPS  SS+ P RVSS S PKARF+ARQKQS                     SVLDAERI RVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCD TQEG+SEQQITSDAVIEVNIEIPFAFRVFPVGA+EATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI
Sbjct:    1 MALSSASLSRLTTTSLSLSAKKTNRNPRNPSLSFTITSSSSFDEPPKPS--SSTPPIRVSSSSVPKARFIARQKQSISVRQLQRPLIEYMSLPASQYSVLDAERIERVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFDASMVNRVSCDSTQEGTSEQQITSDAVIEVNIEIPFAFRVFPVGAVEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI 253

The following BLAST results are available for this feature:

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein

BLAST of C09p72310.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
XP_013729433.1	4.120e-152	100.00	uncharacterized protein BNAC09G50560D [Brassica na...	[more]
XP_009122596.1	1.970e-144	88.14	uncharacterized protein SYNPCC7002_A1590 [Brassica...	[more]
XP_013588592.1	1.100e-140	94.78	PREDICTED: uncharacterized protein SYNPCC7002_A159...	[more]
XP_002871094.1	3.510e-140	84.92	uncharacterized protein LOC9309219 [Arabidopsis ly...	[more]
XP_018445924.1	1.640e-136	85.38	PREDICTED: uncharacterized protein LOC108817669 [R...	[more]
NP_196064.2	2.050e-135	83.92	RAP release 2, galactose-binding-like domain prote...	[more]
XP_006398904.1	4.920e-135	84.52	uncharacterized protein LOC18019371 [Eutrema salsu...	[more]
VVB13202.1	2.480e-134	83.98	unnamed protein product [Arabis nemorensis]	[more]
CAA7033929.1	2.680e-133	81.89	unnamed protein product [Microthlaspi erraticum]	[more]
XP_010452341.1	1.050e-132	82.35	PREDICTED: uncharacterized protein LOC104734455 [C...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast

InterPro

Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018971	Protein of unknown function DUF1997	PFAM	PF09366	DUF1997	coord: 80..235 e-value: 3.7E-44 score: 150.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..60
None	No IPR available	PANTHER	PTHR34131:SF3	(RAP ANNOTATION RELEASE2) GALACTOSE-BINDING LIKE DOMAIN CONTAINING PROTEIN	coord: 19..243
None	No IPR available	PANTHER	PTHR34131	FAMILY NOT NAMED	coord: 19..243
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 12..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 17..249
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..11
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..16
None	No IPR available	SIGNALP_GRAM_POSITIVE	SignalP-TM	SignalP-TM	coord: 1..16 score: 0.506

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C09_BnaDARv10	contig	C09_BnaDARv10:63776430..63777813 - View in Apollo

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on Darmor-bzh OGS10 v10	2021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR	2021-04-17
Blast2GO on Darmor-bzh OGS10 v10	2021-04-17
Darmor-bzh OGS10 v10	2020-07-22

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
C09p72310.1_BnaDARv10-RA	C09p72310.1_BnaDARv10-RA	Brassica napus	mRNA	C09_BnaDARv10 63776192..63777893 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>C09p72310.1_BnaDARv10-PA ID=C09p72310.1_BnaDARv10-PA|Name=C09p72310.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=250bp
MALSSATLKLASLSFSAKKTNRNPSLSFTITCSSSFDEPPKPSLTSSSTP
NRVSSSSDPKARFVARQKQSVSVRQLQRPLIEYMSLPASQYSVLDAERIV
RVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPV
VVAQNDKFDASMVNRVSCDGTQEGSSEQQITSDAVIEVNIEIPFAFRVFP
VGAIEATGTQVLDQILRLMLPRFLSQLSKDYQAWASGDTSRQPLGTGEI.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018971	DUF1997

Vocabulary: **Cellular Component**
Term	Definition
GO:0009507	chloroplast

Orthology

View orthology data for C09p72310.1_BnaDARv10-PA

Metabolic Model

View data from metabolic model for C09p72310.1_BnaDARv10-PA