C09p71040.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameC09p71040.1_BnaDARv10-RA
Unique NameC09p71040.1_BnaDARv10-PA
Typepolypeptide
OrganismBrassica napus (cv. Darmor-bzh, rapeseed)
Sequence length271
Homology
[Close]
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013608729.1 (PREDICTED: transcription factor DIVARICATA [Brassica oleracea var. oleracea] >XP_013728477.1 transcription factor DIVARICATA [Brassica napus] >KAF3499429.1 hypothetical protein F2Q69_00045496 [Brassica cretica] >VDD34545.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 560 bits (1444), Expect = 7.260e-202
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0 
Query:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSAGFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS 270
            METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSAGFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS
Sbjct:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSAGFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS 270
[Close]
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009122177.1 (transcription factor DIVARICATA [Brassica rapa] >XP_013715256.1 transcription factor DIVARICATA-like [Brassica napus] >RID42778.1 hypothetical protein BRARA_J02638 [Brassica rapa] >VDD20869.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 557 bits (1435), Expect = 1.710e-200
Identity = 267/270 (98.89%), Postives = 269/270 (99.63%), Query Frame = 0 
Query:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSAGFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS 270
            METLHPLLSHVPTSDHRFVVQEMMCLQTS WTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGL+PIPGYPSAGFDQLVSPYDHDLYRKRP+GGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS
Sbjct:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSTWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLVPIPGYPSAGFDQLVSPYDHDLYRKRPNGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS 270
[Close]
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF2535871.1 (hypothetical protein F2Q68_00023270 [Brassica cretica] >KAF3566180.1 hypothetical protein DY000_02019702 [Brassica cretica])

HSP 1 Score: 557 bits (1435), Expect = 1.710e-200
Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 0 
Query:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSAGFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS 270
            METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSAGFDQLVSPYDHDLYRKRP+GGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSV SPYEPAFKFTGTNVYGGGAYGLARS
Sbjct:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSAGFDQLVSPYDHDLYRKRPNGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVSSPYEPAFKFTGTNVYGGGAYGLARS 270
[Close]
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018445578.1 (PREDICTED: transcription factor DIVARICATA-like [Raphanus sativus])

HSP 1 Score: 525 bits (1351), Expect = 1.140e-187
Identity = 255/271 (94.10%), Postives = 260/271 (95.94%), Query Frame = 0 
Query:    1 METLHPLL-SHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSAGFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS 270
            METLHPLL SHVPTSDHRFVVQEMMCLQTS WTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGL+PIPGYPSAGFD LVSP+D DLYRKRP+GGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLN NITR SSDHDRFLQQPDE KLGFTD+GNAE+GVMFLGQNLSSVLSPYEPAFKFTGTNVYG GA  L RS
Sbjct:    1 METLHPLLLSHVPTSDHRFVVQEMMCLQTSTWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLVPIPGYPSAGFDHLVSPHDFDLYRKRPNGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNNNITRTSSDHDRFLQQPDEPKLGFTDRGNAEDGVMFLGQNLSSVLSPYEPAFKFTGTNVYGDGACCLTRS 271
[Close]
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018445577.1 (PREDICTED: transcription factor DIVARICATA-like [Raphanus sativus])

HSP 1 Score: 517 bits (1331), Expect = 1.320e-184
Identity = 253/272 (93.01%), Postives = 259/272 (95.22%), Query Frame = 0 
Query:    1 METLHPLL-SHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGY-PSAGFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS 270
            METLHPLL SHVPTSDHRFVVQEMMCLQTS WTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGL+PIPGY PSAGFD LVSP+D DLYRKRP+GGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLN NITR SSDHDRF+QQ DE KLGFTD+ NAE+GVMFLGQNLSSVLSPYEPAFKFTGTNVYG GAY L RS
Sbjct:    1 METLHPLLLSHVPTSDHRFVVQEMMCLQTSTWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLVPIPGYSPSAGFDHLVSPHDFDLYRKRPNGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNNNITRTSSDHDRFIQQQDEPKLGFTDRDNAEDGVMFLGQNLSSVLSPYEPAFKFTGTNVYGDGAYCLTRS 272
[Close]
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_006399038.1 (transcription factor DIVARICATA [Eutrema salsugineum] >ESQ40491.1 hypothetical protein EUTSA_v10014370mg [Eutrema salsugineum])

HSP 1 Score: 481 bits (1238), Expect = 2.050e-170
Identity = 234/273 (85.71%), Postives = 247/273 (90.48%), Query Frame = 0 
Query:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSA---GFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS 270
            METLHPLLSHVPTS H+FVVQEMM LQ+S WTKEENKKFERALA+YADDTPDRWFKVAAMIPGKTISDVM QYSKLEEDLFDIEAGL+PIPGYPSA   GFDQLVSP D DLY KRP+ GARGFDQ+RRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVG+KTPTQVASHAQKYYQRQLS AKDKRRPSIHDITTVNLLN N +RP SDHD FLQQP E+K GFTD+ NAEEGVMFLG+NLSSVLSPY+PA KF G NVY  GAY + RS
Sbjct:    1 METLHPLLSHVPTSSHQFVVQEMMSLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMWQYSKLEEDLFDIEAGLVPIPGYPSATPCGFDQLVSPRDFDLYHKRPNNGARGFDQERRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGTKTPTQVASHAQKYYQRQLSNAKDKRRPSIHDITTVNLLNNNPSRPLSDHDSFLQQPPEAKQGFTDRDNAEEGVMFLGKNLSSVLSPYDPAVKFAGENVYDDGAYCITRS 273
[Close]
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Match: CAA0400902.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 470 bits (1209), Expect = 6.210e-166
Identity = 230/272 (84.56%), Postives = 245/272 (90.07%), Query Frame = 0 
Query:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSA---GFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLAR 269
            METLHPLLSHVPTSDHRFVVQEMMCLQ+S WTKEENKKFERALA+YADDTPDRWFKVAAMIPGKTISDVM QYSKLEEDLFDIEAGL+PIPGY SA   GFDQ+VSP D D YRK P+G ARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLN N++RPSSDH   + +  E KLGFTD+ NAEEGVMFLGQNLSSV S Y+PA KF+G NVYG G Y +++
Sbjct:    1 METLHPLLSHVPTSDHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYRSATPCGFDQVVSPRDFDAYRKLPNG-ARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNANLSRPSSDHGCLVSKQAEPKLGFTDRDNAEEGVMFLGQNLSSVFSSYDPAVKFSGANVYGEGGYCISQ 271
[Close]
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Match: NP_001332439.1 (Duplicated homeodomain-like superfamily protein [Arabidopsis thaliana] >NP_196198.1 Duplicated homeodomain-like superfamily protein [Arabidopsis thaliana] >AAS10001.1 MYB transcription factor [Arabidopsis thaliana] >ABG48410.1 At5g05790 [Arabidopsis thaliana] >AED90925.1 Duplicated homeodomain-like superfamily protein [Arabidopsis thaliana] >ANM70861.1 Duplicated homeodomain-like superfamily protein [Arabidopsis thaliana] >BAB09673.1 unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 469 bits (1206), Expect = 1.780e-165
Identity = 229/272 (84.19%), Postives = 244/272 (89.71%), Query Frame = 0 
Query:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSA---GFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLAR 269
            METLHPLLSHVPTSDHRFVVQEMMCLQ+S WTKEENKKFERALA+YADDTPDRWFKVAAMIPGKTISDVM QYSKLEEDLFDIEAGL+PIPGY S    GFDQ+VSP D D YRK P+G ARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLN N++RPSSDH   + +  E KLGFTD+ NAEEGVMFLGQNLSSV S Y+PA KF+G NVYG G Y +++
Sbjct:    1 METLHPLLSHVPTSDHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYRSVTPCGFDQVVSPRDFDAYRKLPNG-ARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNANLSRPSSDHGCLVSKQAEPKLGFTDRDNAEEGVMFLGQNLSSVFSSYDPAIKFSGANVYGEGGYCISQ 271
[Close]
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Match: OAO94174.1 (hypothetical protein AXX17_AT5G05290 [Arabidopsis thaliana] >VYS65988.1 unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 467 bits (1201), Expect = 1.030e-164
Identity = 229/272 (84.19%), Postives = 244/272 (89.71%), Query Frame = 0 
Query:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSA---GFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLAR 269
            METLHPLLSHVPTSDHRFVVQEMMCLQ+S WTKEENKKFERALA+YADDTPDRWFKVAAMIPGKTISDVM QYSKLEEDLFDIEAGL+PIPGY SA   GFDQ+VSP D D YRK P+G ARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLN N++RPSSDH   + +  E KLGFTD+ NAEE VMFLGQNLSSV S Y+PA KF+G NVYG G Y +++
Sbjct:    1 METLHPLLSHVPTSDHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYRSATPCGFDQVVSPRDFDAYRKLPNG-ARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNANLSRPSSDHGCLVSKQAEPKLGFTDRDNAEEEVMFLGQNLSSVFSSYDPAVKFSGANVYGEGGYCISQ 271
[Close]
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_002873224.1 (transcription factor DIVARICATA [Arabidopsis lyrata subsp. lyrata] >EFH49483.1 myb family transcription factor [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 463 bits (1191), Expect = 2.860e-163
Identity = 228/273 (83.52%), Postives = 241/273 (88.28%), Query Frame = 0 
Query:    1 METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDTPDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSA---GFDQLVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNTNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEPAFKFTGTNVYGGGAYGLARS 270
            METLHPLLSHVPTS HRFVVQEMMCLQ+S WTKEENKKFERALA+YADDTPDRWFKVAAMIPGKTISDVM QYSKLEEDLFDIEAGL+PIPGY SA   GFDQ+VSP D D YRK P+G ARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLN N++RPSSD+   +    E KLGFTD+ NAEEGV FLGQNLSSV S Y+PA KF G N+YG G Y + RS
Sbjct:    1 METLHPLLSHVPTSGHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYHSATPCGFDQVVSPRDFDAYRKLPNG-ARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLNANLSRPSSDNGCLVSHQAEPKLGFTDRDNAEEGVKFLGQNLSSVFSSYDPAVKFAGANLYGEGGYCITRS 272
The following BLAST results are available for this feature:
BLAST of C09p71040.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
XP_013608729.17.260e-202100.00PREDICTED: transcription factor DIVARICATA [Brassi... [more]
XP_009122177.11.710e-20098.89transcription factor DIVARICATA [Brassica rapa] >X... [more]
KAF2535871.11.710e-20099.26hypothetical protein F2Q68_00023270 [Brassica cret... [more]
XP_018445578.11.140e-18794.10PREDICTED: transcription factor DIVARICATA-like [R... [more]
XP_018445577.11.320e-18493.01PREDICTED: transcription factor DIVARICATA-like [R... [more]
XP_006399038.12.050e-17085.71transcription factor DIVARICATA [Eutrema salsugine... [more]
CAA0400902.16.210e-16684.56unnamed protein product [Arabidopsis thaliana][more]
NP_001332439.11.780e-16584.19Duplicated homeodomain-like superfamily protein [A... [more]
OAO94174.11.030e-16484.19hypothetical protein AXX17_AT5G05290 [Arabidopsis ... [more]
XP_002873224.12.860e-16383.52transcription factor DIVARICATA [Arabidopsis lyrat... [more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0000976 transcription regulatory region sequence-specific DNA binding
InterPro
Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 27..79
e-value: 8.9E-7
score: 38.5
coord: 127..177
e-value: 9.9E-11
score: 51.6
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 31..75
e-value: 2.2E-5
score: 24.5
coord: 130..174
e-value: 1.1E-10
score: 41.6
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 130..174
e-value: 3.74419E-10
score: 52.1926
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 31..76
e-value: 1.61594E-7
score: 44.8738
NoneNo IPR availableGENE3D1.10.10.60coord: 27..90
e-value: 2.1E-17
score: 64.7
NoneNo IPR availableGENE3D1.10.10.60coord: 129..179
e-value: 1.2E-15
score: 59.4
NoneNo IPR availablePANTHERPTHR44042:SF38SUBFAMILY NOT NAMEDcoord: 1..268
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 127..178
e-value: 1.3E-16
score: 58.6
IPR043363Transcription factor DIVARICATA-likePANTHERPTHR44042DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 1..268
IPR017884SANT domainPROSITEPS51293SANTcoord: 26..79
score: 7.936
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 123..179
score: 18.108
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 29..83
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 125..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C09_BnaDARv10contigC09_BnaDARv10:63190644..63191580 +    View in Apollo
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on Darmor-bzh OGS10 v102021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR2021-04-17
Blast2GO on Darmor-bzh OGS10 v102021-04-17
Darmor-bzh OGS10 v102020-07-22
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
C09p71040.1_BnaDARv10-RAC09p71040.1_BnaDARv10-RABrassica napusmRNAC09_BnaDARv10 63190644..63191580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>C09p71040.1_BnaDARv10-PA ID=C09p71040.1_BnaDARv10-PA|Name=C09p71040.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=271bp
METLHPLLSHVPTSDHRFVVQEMMCLQTSIWTKEENKKFERALAIYADDT
PDRWFKVAAMIPGKTISDVMTQYSKLEEDLFDIEAGLIPIPGYPSAGFDQ
LVSPYDHDLYRKRPSGGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGD
WRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVNLLN
TNITRPSSDHDRFLQQPDESKLGFTDKGNAEEGVMFLGQNLSSVLSPYEP
AFKFTGTNVYGGGAYGLARS.
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR017884SANT_dom
IPR043363DIVARICATA-like
IPR006447Myb_dom_plants
IPR001005SANT/Myb
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000976transcription regulatory region sequence-specific DNA binding
GO:0005515protein binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus