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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Model size | 1069 |
Exons | 1 |
Cds size | 723 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
A01p12480.1_BnaDARv10 | A01p12480.1_BnaDARv10 | Brassica napus | gene | A01_BnaDARv10 6338639..6339707 - |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1626340566.2270305-five_prime_UTR-A01_BnaDARv10:6338638..6338954 | 1626340566.2270305-five_prime_UTR-A01_BnaDARv10:6338638..6338954 | Brassica napus | five_prime_UTR | A01_BnaDARv10 6338639..6338954 - |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
A01p12480.1_BnaDARv10_exon1 | A01p12480.1_BnaDARv10_exon1 | Brassica napus | exon | A01_BnaDARv10 6338639..6339707 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1626340566.234455-CDS-A01_BnaDARv10:6338954..6339677 | 1626340566.234455-CDS-A01_BnaDARv10:6338954..6339677 | Brassica napus | CDS | A01_BnaDARv10 6338955..6339677 - |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1626340566.2411377-three_prime_UTR-A01_BnaDARv10:6339677..6339707 | 1626340566.2411377-three_prime_UTR-A01_BnaDARv10:6339677..6339707 | Brassica napus | three_prime_UTR | A01_BnaDARv10 6339678..6339707 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >A01p12480.1_BnaDARv10-RA ID=A01p12480.1_BnaDARv10-RA|Name=A01p12480.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=1069bp|location=Sequence derived from alignment at A01_BnaDARv10:6338639..6339707- (Brassica napus)|Notes=Excludes all bases but those of type(s): exon.
AGAGGTCTCGACGGAATCAAAATCTCAGTCATGATCCGATTCACAAGAAC AAAACCCATACTCGACTCACTGAGTCACGACCTCCTCCAGAAATGCCACG CGAGCGGAACCCCCAAGGGAAAATCCAAGCTCAAGACAATCCAAGCCTTG AAGCGCCACAAAGCCACCACCAAAAGAGGCGGCGGTGTAGAGGATGCGAG TAAAGGCAAAGGAGCAATCTCCGACCACTGCATAAACCCACCTCACCCCG TTCGCTACCTCCGACCCAAGGAGAGAGACCGAGAGGCCCAGCGAGAGAAG CTCGGCCTGATCAGCAAAGCCAGGCAACGAGAGATCGATATCCAGAAAAA GCTCGGACCTTTCACGAAGACGAGAGCCACCGACGAGGAGCCGATCAGGA TCGGGGTCGCGGGGTTGGATTACGTCGCGTTGGGGATTTTTACTGAGGAC GAGTTGCCGAAGTACAAGGTGACGGTGGAGGACGGGAAGAGGCTGGCGAA GGAGTACAGCAGAGTGCTTATGAGGGAGCATAGGGAGAAGCGTGTTGCGG AGATTGGTCTGATGAAGATGAGGAAAGAGGCCTTGGAGGCGTTGCCGGAG GAGCTGAAGAAGGCGGCTTTGGAGCGTGATGCGACGACGCCGTTTCCGGT GATTCGGGGAGCGGCTACGGTGTTGCCTCCTGTTGAAGGGTATTTGGAGA GGATTATGAATGCGGCTAATAAGAAGAGCTCGAGTAAAGAGAAGCTGAGA TGATCTTATTGGGTTTTGATCAAAAGAACAACGTTGAACTTTTGTTTTTA CTTTGTTGATCCTCCTGAGATAAGATGGTCATAGTGTGTTTACTACACTC TATGGTAGTAGAACACACTAGTTGAAGCTTATAAAGTTTAAATCTTTTTC AACTTTTGTCTGTTTGAGATTGAGTTACTTCATAATAACCTTATGAGTAG TGAAGTTGTTTGGGTTTGAAAGTCACTGGTAACAATTGGTGTCATTCTCT TGGTTGAGGCTGTTCCTTGGTATGGTTTGTGATCTGTAATTAGCAATCAA GAACTCCATAGTAACATGG back to topprotein sequence of A01p12480.1_BnaDARv10-RA >A01p12480.1_BnaDARv10-PA ID=A01p12480.1_BnaDARv10-PA|Name=A01p12480.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=241bp
MIRFTRTKPILDSLSHDLLQKCHASGTPKGKSKLKTIQALKRHKATTKRG GGVEDASKGKGAISDHCINPPHPVRYLRPKERDREAQREKLGLISKARQR EIDIQKKLGPFTKTRATDEEPIRIGVAGLDYVALGIFTEDELPKYKVTVE DGKRLAKEYSRVLMREHREKRVAEIGLMKMRKEALEALPEELKKAALERD ATTPFPVIRGAATVLPPVEGYLERIMNAANKKSSSKEKLR. back to topmRNA from alignment at A01_BnaDARv10:6338639..6339707- Legend: exonthree_prime_UTRpolypeptideCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >A01p12480.1_BnaDARv10-RA ID=A01p12480.1_BnaDARv10-RA|Name=A01p12480.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=1069bp|location=Sequence derived from alignment at A01_BnaDARv10:6338639..6339707- (Brassica napus) AGAGGTCTCGACGGAATCAAAATCTCAGTCATGATCCGATTCACAAGAAC
AAAACCCATACTCGACTCACTGAGTCACGACCTCCTCCAGAAATGCCACG
CGAGCGGAACCCCCAAGGGAAAATCCAAGCTCAAGACAATCCAAGCCTTG
AAGCGCCACAAAGCCACCACCAAAAGAGGCGGCGGTGTAGAGGATGCGAG
TAAAGGCAAAGGAGCAATCTCCGACCACTGCATAAACCCACCTCACCCCG
TTCGCTACCTCCGACCCAAGGAGAGAGACCGAGAGGCCCAGCGAGAGAAG
CTCGGCCTGATCAGCAAAGCCAGGCAACGAGAGATCGATATCCAGAAAAA
GCTCGGACCTTTCACGAAGACGAGAGCCACCGACGAGGAGCCGATCAGGA
TCGGGGTCGCGGGGTTGGATTACGTCGCGTTGGGGATTTTTACTGAGGAC
GAGTTGCCGAAGTACAAGGTGACGGTGGAGGACGGGAAGAGGCTGGCGAA
GGAGTACAGCAGAGTGCTTATGAGGGAGCATAGGGAGAAGCGTGTTGCGG
AGATTGGTCTGATGAAGATGAGGAAAGAGGCCTTGGAGGCGTTGCCGGAG
GAGCTGAAGAAGGCGGCTTTGGAGCGTGATGCGACGACGCCGTTTCCGGT
GATTCGGGGAGCGGCTACGGTGTTGCCTCCTGTTGAAGGGTATTTGGAGA
GGATTATGAATGCGGCTAATAAGAAGAGCTCGAGTAAAGAGAAGCTGAGA
TGATCTTATTGGGTTTTGATCAAAAGAACAACGTTGAACTTTTGTTTTTA
CTTTGTTGATCCTCCTGAGATAAGATGGTCATAGTGTGTTTACTACACTC
TATGGTAGTAGAACACACTAGTTGAAGCTTATAAAGTTTAAATCTTTTTC
AACTTTTGTCTGTTTGAGATTGAGTTACTTCATAATAACCTTATGAGTAG
TGAAGTTGTTTGGGTTTGAAAGTCACTGGTAACAATTGGTGTCATTCTCT
TGGTTGAGGCTGTTCCTTGGTATGGTTTGTGATCTGTAATTAGCAATCAA
GAACTCCATAGTAACATGG back to topCoding sequence (CDS) from alignment at A01_BnaDARv10:6338639..6339707- >A01p12480.1_BnaDARv10-RA ID=A01p12480.1_BnaDARv10-RA|Name=A01p12480.1_BnaDARv10-RA|organism=Brassica napus|type=CDS|length=723bp|location=Sequence derived from alignment at A01_BnaDARv10:6338639..6339707- (Brassica napus) ATGATCCGATTCACAAGAACAAAACCCATACTCGACTCACTGAGTCACGA CCTCCTCCAGAAATGCCACGCGAGCGGAACCCCCAAGGGAAAATCCAAGC TCAAGACAATCCAAGCCTTGAAGCGCCACAAAGCCACCACCAAAAGAGGC GGCGGTGTAGAGGATGCGAGTAAAGGCAAAGGAGCAATCTCCGACCACTG CATAAACCCACCTCACCCCGTTCGCTACCTCCGACCCAAGGAGAGAGACC GAGAGGCCCAGCGAGAGAAGCTCGGCCTGATCAGCAAAGCCAGGCAACGA GAGATCGATATCCAGAAAAAGCTCGGACCTTTCACGAAGACGAGAGCCAC CGACGAGGAGCCGATCAGGATCGGGGTCGCGGGGTTGGATTACGTCGCGT TGGGGATTTTTACTGAGGACGAGTTGCCGAAGTACAAGGTGACGGTGGAG GACGGGAAGAGGCTGGCGAAGGAGTACAGCAGAGTGCTTATGAGGGAGCA TAGGGAGAAGCGTGTTGCGGAGATTGGTCTGATGAAGATGAGGAAAGAGG CCTTGGAGGCGTTGCCGGAGGAGCTGAAGAAGGCGGCTTTGGAGCGTGAT GCGACGACGCCGTTTCCGGTGATTCGGGGAGCGGCTACGGTGTTGCCTCC TGTTGAAGGGTATTTGGAGAGGATTATGAATGCGGCTAATAAGAAGAGCT CGAGTAAAGAGAAGCTGAGATGA back to top
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