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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Model size | 939 |
Exons | 3 |
Cds size | 939 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
A01p05570.1_BnaDARv10 | A01p05570.1_BnaDARv10 | Brassica napus | gene | A01_BnaDARv10 2502771..2509741 + |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1626340491.2132382-CDS-A01_BnaDARv10:2502770..2503194 | 1626340491.2132382-CDS-A01_BnaDARv10:2502770..2503194 | Brassica napus | CDS | A01_BnaDARv10 2502771..2503194 + |
1626340491.2215257-CDS-A01_BnaDARv10:2509010..2509091 | 1626340491.2215257-CDS-A01_BnaDARv10:2509010..2509091 | Brassica napus | CDS | A01_BnaDARv10 2509011..2509091 + |
1626340491.2289681-CDS-A01_BnaDARv10:2509307..2509741 | 1626340491.2289681-CDS-A01_BnaDARv10:2509307..2509741 | Brassica napus | CDS | A01_BnaDARv10 2509308..2509741 + |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
A01p05570.1_BnaDARv10_exon1 | A01p05570.1_BnaDARv10_exon1 | Brassica napus | exon | A01_BnaDARv10 2502771..2503194 + |
A01p05570.1_BnaDARv10_exon2 | A01p05570.1_BnaDARv10_exon2 | Brassica napus | exon | A01_BnaDARv10 2509011..2509091 + |
A01p05570.1_BnaDARv10_exon3 | A01p05570.1_BnaDARv10_exon3 | Brassica napus | exon | A01_BnaDARv10 2509308..2509741 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >A01p05570.1_BnaDARv10-RA ID=A01p05570.1_BnaDARv10-RA|Name=A01p05570.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=939bp|location=Sequence derived from alignment at A01_BnaDARv10:2502771..2509741+ (Brassica napus)|Notes=Excludes all bases but those of type(s): exon.
ATGAGGGACCTATCTGTAATTATTTTGCCACTCCCCACTGCTGTTACCTC ACCGCTTTGCTCCTTTAAGAAACTCTCCAGCTCCATGATCGCGCCGCGTC AGGCGTTTACGCGGAAGCAGGAGTACGAGAGCCTCAGGGAGGAAGAAGAT AGAGCCTGGAGTAAGCTTCGGAGGCCGGTGGTAATGTCGACGGCGGCTTT AATTTGCGTTGTCATCTTCACTTGCACGATCGTCAGCTTGAGAATTGTGT TTCCGTCGAATGTTCTGAGCAGGCCGTTCTGCGGAGAGGGAAAGGTGCAG AGTTTGAATGTATATGGAAATGGTTTTGACTTGACGGATCAGGAGACTGT GGATTTTTACTGGGTGGTTGTTTTTCTTCCGTCGATGATGCTCTTCTTTG TGTCATCTGTTTATCTTGTAGCAGGAATGTTTGTGGCTTATTCCGCTCCT CGCCGTCATGAGTTTCTAAAAGTCGTTGAAAATAACTACTGTGCTTCTAA AAGAGGTGGGGTTCGTTGCCTGTCAATTCTGAATGTTGTGTTTGCTATCA TCTACTGTCTACTCGCTATATTTCTCGGCTCAAGCCTCCTGATACAGGAG AGCAGCTGTTCTGTGCCATTGTTTTGGTGCTACGAGATATCTTCATGGTG TTTGGTAATCTTGTACGCTGGAACTGCCTTCTTCCTTAGAAGAAGAGCCG CTTTGAGTATTGACGAAGGAGAGTTTGAGAACAGAAGCCATCAGGGACTG GAGATGCTTGAAGCTAATCATCCTTTTGAGTTCACACCAGATGTTGAAAG AAGAGTGAACGAGGGGTTTAAAGCATGGATGGGTCCATCTTTGCTATCAT CTGATGACGAAGACGAAGACGAACCCGAGTTTTACAATAAGGTGCCCAAT GTAACAGCTTATACTCTTTCGAGCAGGCAAAGATCTTGA back to topprotein sequence of A01p05570.1_BnaDARv10-RA >A01p05570.1_BnaDARv10-PA ID=A01p05570.1_BnaDARv10-PA|Name=A01p05570.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=313bp
MRDLSVIILPLPTAVTSPLCSFKKLSSSMIAPRQAFTRKQEYESLREEED RAWSKLRRPVVMSTAALICVVIFTCTIVSLRIVFPSNVLSRPFCGEGKVQ SLNVYGNGFDLTDQETVDFYWVVVFLPSMMLFFVSSVYLVAGMFVAYSAP RRHEFLKVVENNYCASKRGGVRCLSILNVVFAIIYCLLAIFLGSSLLIQE SSCSVPLFWCYEISSWCLVILYAGTAFFLRRRAALSIDEGEFENRSHQGL EMLEANHPFEFTPDVERRVNEGFKAWMGPSLLSSDDEDEDEPEFYNKVPN VTAYTLSSRQRS. back to topmRNA from alignment at A01_BnaDARv10:2502771..2509741+ Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >A01p05570.1_BnaDARv10-RA ID=A01p05570.1_BnaDARv10-RA|Name=A01p05570.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=6971bp|location=Sequence derived from alignment at A01_BnaDARv10:2502771..2509741+ (Brassica napus) ATGAGGGACCTATCTGTAATTATTTTGCCACTCCCCACTGCTGTTACCTC
ACCGCTTTGCTCCTTTAAGAAACTCTCCAGCTCCATGATCGCGCCGCGTC
AGGCGTTTACGCGGAAGCAGGAGTACGAGAGCCTCAGGGAGGAAGAAGAT
AGAGCCTGGAGTAAGCTTCGGAGGCCGGTGGTAATGTCGACGGCGGCTTT
AATTTGCGTTGTCATCTTCACTTGCACGATCGTCAGCTTGAGAATTGTGT
TTCCGTCGAATGTTCTGAGCAGGCCGTTCTGCGGAGAGGGAAAGGTGCAG
AGTTTGAATGTATATGGAAATGGTTTTGACTTGACGGATCAGGAGACTGT
GGATTTTTACTGGGTGGTTGTTTTTCTTCCGTCGATGATGCTCTTCTTTG
TGTCATCTGTTTATCTTGTAGCAGGTGAGTTTCCAAGTCTCTAGCTTTTG
TGGCTGATAAATTGTTAGAGAGTGTTGGTTGAGGTGTCCTTATAACCTGA
ATGTTTGTTGATAGGTTTAGTTCTATAAAGTATTAGTCTTGACTCTTGAC
TGAAGCTATTATATGAAGTTAAGTCTAGTTCTGTGTTGGGTCAGGTTTAT
TGGGGTTTAGTGTGTCAACCATAGTGCAAGTTGGTACTCATTACTGTGTT
AAGTCAAGTGAACCCGTTTGTTAGATTGGTGGGTCTATAATATTTTTCCT
TTTGGAGCTTTCTGTCTCCCTCATATGCTTGACTTTCACATGGCAGCCCT
TCTTAGTTCCAGCTCTCTAAGTTTTGAAGGTTCTTAGTGAGCATTGGATT
GAACTTCTAGAGTCGAGTTCCATCTATTATCTCTTTTCATTCAGGCCTTC
AACAAGTAACTCTTAACAACATATAAACGGTTGAATTATTGTCATCCTTT
ATGACTAAGCCTCTTTACAATCTCTCCTTTGTGTTTTTTTTATTAGTCTA
ATCATTAAGGTGTGGTATGTTGATAGACCATTAAGAGTATACGTTCGGAA
GAGATTGAGAGCAAATGAGGAAGCAGACGTGGCAGAGTGACGTGGAAAGG
AAGAGTAGAAGACTGAAGAAGAGTATAAATAGAAGAGAGAAAGGAAAAAT
AGAGGCATTCAGTTAGATTGTAACAGAATCATAGGCTTGTGGAGAGAGAT
CTCACAAGATAGGCAGATTCGGGAGCTTGTTCTCGTTTCTGAGGATCAGA
TTCATTCGGAGCTTTGGTTCTTGGTGAATTTGATACAGATACTTCTTTGT
TAATCGAATAATACAAGTATTTGCTTAACAAATTGGTGCGGTGACTCGCT
CGAATCTACGCGGGCGGAGAAACGGATCGTGATCGAGCAACGAAGCACGG
AGATGACGTCGATCGCATCATTCGATAATGATCTGGAGGAGATGCATAAT
AACATCGGGATTTGCGGAAACAAGTCAAGCGATTCATGGAGGTTGGGAAC
GTCTTACTTAAGTCGAACGAAGAGTTATCGACACGGATGGCGCACGATAG
TATGACGTTATCGAGAATGGATGCATGGCAGCAAGCTGAGAAAGCTGCGG
GAAGACAGTTGCAGGAACATCGACTCAACAGGAGCAGGTACATCGCTCGT
TCTCAGATACACCTATGGAAGGTCAATCGTCAAGGTTATCGGGGAATCGC
GAATAACTGGAATCTAGAAGTGAATTGTTGAAGAAAGTGGATCTTCCTAA
TTTTGTGGGAGCCAATCCAAACGTTTGGATCAATAGAGCAGAAAGGTTCT
TTCGATTGGGGAATTTCTCCGAACGTGAGAGATTTGATTTGTTATCTGTG
CGTTTTGAGGGAACAGTATTGAATTGGTTTAACATTGAGCTGGAGGAAGA
ACCGTTTGTAAGTTGGGAAGACTTCAAGGAAAGATTGGTATTGCGTTTTA
CGCAACGGATGGAGGATGAACCGGGAAAGTGACTGTTTGCAATCACACAG
AAGGGGTCGATAACAGAATACATCAATGAGTTTGAAGAATTACGATCAAT
GGTGACGGGAATAGATGAAAAGAACTTGGTTCATGTGTTCTTTAATGGTC
TGAAAACTGAGATGAAAGAGGTGATTAAGATGAAAGAACCAAAGGGATTA
CGTCAACACATAGCAGCAGTGAGCATGATGGAGGACAAGTGCGCTCAGAA
GTCAAGTAGCAAGGGTTGCTCATACAGTCACACCATCACGTTCGACGGGT
TTCATTCCTTTACGATCATCATCAAATTTCAACAGTAACAAACAAGAGTC
GAGCACTAGCAGTCAACAAGTTAGAAAGCAGGGTGGTCACACAGGAGCTA
AACGTTTAACTCCAGCAGAGGTGGCTGAGAAAAGACGCTTGGGGTTGTGT
TATCAGTGTGATGAGAAGTGGTCCAAGTCTCACGAATGCAACGCAGTGGG
ATTACAAGTGATAACGGTGGTTGATGGTTGTGAAGTTGAGTTACATAATG
AAGAGTGGATAGATACATTTGAAGATGAAAATGGTGTGGTGACAGAACTC
ATGGGGATATCACTAGCTTCCTTCTTTGGATTATCGTCTCCGACGACGAC
GAAGGTGTGGGGTAACATTGGTCAGCTGAAGATAGTGGTAATGCTTGACA
GTGGTGCCACACCCAATTTCTTATCTCCCACGGTGGTCACACAACTGCAG
ATCACGCCAGTGAGAGACAGGAAGTTGGAGATCATTTTGGGTACGGGTAT
ATCGGTAAATGGAACGGGTGTTTGCAAGGATGTACAATTTGGCTTGCCAG
TGTTGGAAGACAGAGCTGATTTTATCATGTTGGAGCTAGGACAAGTCGAT
ATGATTCTTGGAGTTCAGTGGCTTCGCACGTTGGGAAAGTGTGAAGTGGA
TTGGGAAAAACATGAAATGTCTTTTGATTTCAAAGGAAAGCGTGTCACAT
TACAGGGTGATTCGTCACTTCAGAATGGGCACATGAATCAGAAAGGATTG
CAGTTAAATAAGTCTCACTTAAATGGAATTGACGTTGAGTTCTTCCAGGT
CAATACTACCGATAAACAACAAGAGATTCCACTTCCGATAGAGCACTTCA
TTGGAAAGGCACTTGAAAATTTTTTGCTGAGCCAACTCAGTTACCGCCTC
TGCGTGATAGAGAGCATGCTATCAATCTTATAGCAGGTACTGGGCCCGTA
AGTGTTCGTCCTTATCGTTACCCTCACTCATATAAGGAAGAGATGGAAAA
GATGGTTTCTCAAATGTTGCAATCGGGCATCATCCGTCCAAGTCGCAGCC
CTTATTCCAGTCCCGTGTTGTTGGTAAAGAAAAAGGATGGGACTTGGCGA
TTTTGCATTGACTACAGAGCATTAAATAGAGTAACAGTGGCTGACAAATT
TTCCATTCCCATGATCGATCAGCTGCTAGATGAGTTGTTCGGGGCTCAGA
TCTTCTCTAAGCTGGATTTGCGTTCGGGTTATCATCAGATCCGAATGAAG
GAGCAAGATATACACAAGACAGCGTTCCGAACAGCAGATGGTCATTACGA
GTTTGTAGTGATGCCGTTTGGGTTAACAAATGCACCAGCTACATTTCAAG
CTCTCATAAATGAGATATTCAGACCATACTTACGAAAATTCATCTTGGTG
TTTTTTTTATGACATTCTGATATATAGCAAGACAGTGGAAGAGCATGTAC
AACATTTGGAGATTGTTCTGAAGCTGTTTGAGAAACACCAACTGTTTGCT
AATAAAAAGAAATTCTCCTTTGGCCAATCAAAGGTAGAGTATTTGGGTCA
TTTGATAAGCAGAGAAGGCATTTCGACTGATCCAGAAAAGACAGAGGCAA
TGCGTAGATGGCCTATTCCAAAGACAGTAAAAGATTTAAGAGGATTCTTG
GGTTTAACAGGCTATTACAGGAACTATGTGAAGGGTTATGGTTCTATAGC
TCCACCATTAACTAGTTTGTTGAGGAAGGATGCTTTTGAATGGTCAGAGC
AAGCTAAGAAGGCATTTGATGCGTTGAAAATTGCGATGTGTACAGCTCCG
GTCTTAACGTTACCAGATTTCACAAAGACATTTGTTGTGGAGTCTGATGC
ATCTGGTTATGGCGTGGGCGCGGTTTTGATGCAGAACCAGAGACCAGTGG
CGTATTTCAGCGCAAGGTTGTCAGATAGGGAGCAGATAAAACCCATTTAT
GAGCGGGAATTAATGGCAATAGTACTTGCGATTCAGAAGTGGCGTCAATA
TTTGTTGGGGAGGAAGTTTATAGTACACACTGATCAAAAGAGTTTGAAAT
TTCTCTTAGAACAACGAGAGGTTTCTTTGGATTATCAACGATGGCTTACT
AAGCTTTTGGGTTATGATTTTGACATAATCTTTAAGCCATGATTGGAAAA
TAAAGCGGCAGACGGTTTATCTCGGGTAGGAGTGCAGGATTCTGAGCTGA
CGAAATTGTCATTAACTGCATTAACGGTTCCGGCGAGTATTCAAATGCAA
GACATCTTTGCGGACATTGATCGATCACAGGAGTTACAAACACTGAAGGC
AGCGATTGATAATGGGACAGTTAAGAAGGCTGGATATGACATTGTTCAGG
GCAGAGTACGATATAAAGGTCGCTTGTTTTTGGCAAAAGATTCACCTCAC
ATACCGTTGATTCTTCGAGAGTATCATGACAGTCTCCTAGGTGGTCATTC
CGGGGTATTAAAGACTGTCAAACGTGTTCAAACGGTGTTTCATTGGCGCA
AGATGACAAAGGATATTCAGGCGTATGTAGCTGCGTGTGATGTCTGTCAA
CGACATAAATATTCGACGTTAACTCCAGCTGGGCTCTTGCAACCATTACC
TACTCCTCAACAGGTGTGGGATGGTCTTTCTATGGACTTTATTGAAGGGC
TTCCGGTTTCTCACGGGGTGAATGTTGTCTTCGTAGTGGTGGACCGCTTA
AGCAAGTTTGCACACTTCTTAAGTTTGAAACATCCGTTTACAGCAGTGGA
CGTTGCGAATCTGTTCATTAAAGAGATCGTCCGCTTACATGGGTTTCCTG
CGTCGATTGTGTCAGACAGAGATCGCATTTTCTTAAGTTCTTTTTGGAAG
AGTCTGTTCAGATTGGGAGGAACACAACTGAAGTATAGTACAGCCTTTCA
TCCGCAAACTGATGGGCAAATAGAAGTTCTTAACCGTTGTCTCGAAACGT
ACTTGCGTTGCTTTGCTTCGTCCCATCCAAAGTCGTGGGCAAAATACTTG
CCTTGGGCAGAGTTATGGTATAACACAAACTATCACACCGCTTTGGGAAC
AACGCCGTTTCGGGTGGTATATGGACGGGATCCTCCATCTATATTGAAGT
TTGAAGAGGGATCCACTGCTAACTTTGATTTGGAATGTATGTTGAAGGAA
AGAGATAGTATGTTGAAGCAGATTAAACAACATTTGCTATTGGCTCAGGA
TCGAATGAAGACTAATGCTGTTAAACATAGGAGAGAGCTGATTTTTCAGG
TGGGTGATATGGTGTTTTTGAAGCTACGTCCGTATCGTCAACGTTCTGTG
GTGAAACGTTTGTACCAGAAGTTGGCGGCTCGTTATTTTGGTCCATTTGA
AGTTACAGGACGTGTTGGAGCGGTCGCGTATAGGTTGAAGCTACCAGAGG
AGTCGAAGATTCATAATGTGTTTCACGTTTCTCAATTGAAACCGGTTATT
GGGCAGAATCATCACGTGATGGATTTACCTCGTTCGTTATCGGAGGCTGA
GGAGGTGGTGATTGAACCTGCACGGGTGCTAGACACACGCTATGATGCTC
AGGGTTGTTTGGAAGGGTTAGTTTCTTGGACAGGCTTGCCAGATTATGAG
AATTCATGGGAGAAGGCTACAATGTTACTTAAGCAATTTCCTCATCTGAA
GCTTGAGGACAAGCTTCGTTTCGACGCGGCGGGTATTGATAGACCATTAA
GAGTATTCGTTCGGAAGAGATTGAGAGCAAATGAGGAAGCAGACGTGGCA
GAGTGACGTGGAAAGGAAGAGTAGAAGACTGAAGAAGAGTATAAATAGAA
GAGAGAAAGGAAAAATAGAGACATTCAGTTAGATTGTAACAGAATCATAG
GCTTGTGGAGAGAGATCTCACAAGATAGGCAGATTCGGGAGCTTGTTCTC
GTTTCTGAGGATCAGATTCATTCGGAGCTTTGGTTATTGGTGAATTTGAT
ACAGATACTTCTTTGTTAATCGAATAATACAAGTATTTGCTTAACATATG
TCTTCTTATTTTTCTCGTTATTTGGTTGCAAACACTGCAGGAATGTTTGT
GGCTTATTCCGCTCCTCGCCGTCATGAGTTTCTAAAAGTCGTTGAAAATA
ACTACTGTGCTTCTAAAAGAGGTATACACTATCTTCTCTCACTCTTTACG
ATGTAGTTCAGCTTTCCATATATATGTTTTTGTAATTTTATTGCATGCGT
GCAGCAAATTCATTCCTTCTCAGTACAAAAATTTTTCTTGTAAACTTATA
TGTGCTACTAATAATGATGTTTCCACCTTTGAGAATCTGAAGCTTGGAAT
TATTGATATTTTTTTGTCGTGTCTAATACACTCACAGGTGGGGTTCGTTG
CCTGTCAATTCTGAATGTTGTGTTTGCTATCATCTACTGTCTACTCGCTA
TATTTCTCGGCTCAAGCCTCCTGATACAGGAGAGCAGCTGTTCTGTGCCA
TTGTTTTGGTGCTACGAGATATCTTCATGGTGTTTGGTAATCTTGTACGC
TGGAACTGCCTTCTTCCTTAGAAGAAGAGCCGCTTTGAGTATTGACGAAG
GAGAGTTTGAGAACAGAAGCCATCAGGGACTGGAGATGCTTGAAGCTAAT
CATCCTTTTGAGTTCACACCAGATGTTGAAAGAAGAGTGAACGAGGGGTT
TAAAGCATGGATGGGTCCATCTTTGCTATCATCTGATGACGAAGACGAAG
ACGAACCCGAGTTTTACAATAAGGTGCCCAATGTAACAGCTTATACTCTT
TCGAGCAGGCAAAGATCTTGA back to topCoding sequence (CDS) from alignment at A01_BnaDARv10:2502771..2509741+ >A01p05570.1_BnaDARv10-RA ID=A01p05570.1_BnaDARv10-RA|Name=A01p05570.1_BnaDARv10-RA|organism=Brassica napus|type=CDS|length=939bp|location=Sequence derived from alignment at A01_BnaDARv10:2502771..2509741+ (Brassica napus) ATGAGGGACCTATCTGTAATTATTTTGCCACTCCCCACTGCTGTTACCTC ACCGCTTTGCTCCTTTAAGAAACTCTCCAGCTCCATGATCGCGCCGCGTC AGGCGTTTACGCGGAAGCAGGAGTACGAGAGCCTCAGGGAGGAAGAAGAT AGAGCCTGGAGTAAGCTTCGGAGGCCGGTGGTAATGTCGACGGCGGCTTT AATTTGCGTTGTCATCTTCACTTGCACGATCGTCAGCTTGAGAATTGTGT TTCCGTCGAATGTTCTGAGCAGGCCGTTCTGCGGAGAGGGAAAGGTGCAG AGTTTGAATGTATATGGAAATGGTTTTGACTTGACGGATCAGGAGACTGT GGATTTTTACTGGGTGGTTGTTTTTCTTCCGTCGATGATGCTCTTCTTTG TGTCATCTGTTTATCTTGTAGCAGGAATGTTTGTGGCTTATTCCGCTCCT CGCCGTCATGAGTTTCTAAAAGTCGTTGAAAATAACTACTGTGCTTCTAA AAGAGGTGGGGTTCGTTGCCTGTCAATTCTGAATGTTGTGTTTGCTATCA TCTACTGTCTACTCGCTATATTTCTCGGCTCAAGCCTCCTGATACAGGAG AGCAGCTGTTCTGTGCCATTGTTTTGGTGCTACGAGATATCTTCATGGTG TTTGGTAATCTTGTACGCTGGAACTGCCTTCTTCCTTAGAAGAAGAGCCG CTTTGAGTATTGACGAAGGAGAGTTTGAGAACAGAAGCCATCAGGGACTG GAGATGCTTGAAGCTAATCATCCTTTTGAGTTCACACCAGATGTTGAAAG AAGAGTGAACGAGGGGTTTAAAGCATGGATGGGTCCATCTTTGCTATCAT CTGATGACGAAGACGAAGACGAACCCGAGTTTTACAATAAGGTGCCCAAT GTAACAGCTTATACTCTTTCGAGCAGGCAAAGATCTTGA back to top
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