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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Model size | 1110 |
Exons | 1 |
Cds size | 1110 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
A01p05550.1_BnaDARv10 | A01p05550.1_BnaDARv10 | Brassica napus | gene | A01_BnaDARv10 2488493..2489602 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1626340491.0135589-CDS-A01_BnaDARv10:2488492..2489602 | 1626340491.0135589-CDS-A01_BnaDARv10:2488492..2489602 | Brassica napus | CDS | A01_BnaDARv10 2488493..2489602 - |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
A01p05550.1_BnaDARv10_exon1 | A01p05550.1_BnaDARv10_exon1 | Brassica napus | exon | A01_BnaDARv10 2488493..2489602 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >A01p05550.1_BnaDARv10-RA ID=A01p05550.1_BnaDARv10-RA|Name=A01p05550.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=1110bp|location=Sequence derived from alignment at A01_BnaDARv10:2488493..2489602- (Brassica napus)|Notes=Excludes all bases but those of type(s): exon.
ATGCCGCAACAATTACCAAAAGACTTGATAGGAGACATCCTTTGTCTCTT GCCACTGAAATCTCTTGCCAGATTCAGAGCTGTGTGTAAGGAATGGAACA CTATTTGGGAAGATAAGAGTTTTTCGAACCACTACTTGTCTCGCATGCGT CCTCAATTCATGGTAGCGACCAAGTACCAGACTTGTTCGATAGAAATCAA TCTCGACGAGGAGGACCATGTTTTGTCGTCGATAGTGGAGCGTGATATAA CTTTAGAATATCCATGTGAAACACATACATCAATAGGTTATTGTGATGGG TTCGTGTTATTTTGTATGTACAAGAAAGGGTTTGCGATTTGGAACCCTTG GGTAAGACAGAATAAGTTTATAGAGAATCAAGAATTCGATTTCTGTGGCA TAGGGTACGATGTTACGGGTTACAAGATATTTGGATTGATGTCTTTTTAC GATAGTAGTGGAGAAGACAACTACAAAGTTGCCATCTACGAGTGCAAATC TGAGGTGTGGAAGTTTATTAATGACACTGGTCTTGAACCACGACGTCTGA TAATGCAAGATAATATCGTGTCTATTAAAGGGAATTTATATGTTATTGCT ATCGATAGAAAAACTCGTGAATCTTTCCTCCAGTCCTTTGATTTCTCAGA GGATCAATTCAAGACTATTTGTGCTAATTTACCTAGTATGGAAGGTTGCT TTACAGGACTCCTTGCGGTTTTCAGGGGAGATCGAGTTTCCTTGTTAATG CAATCAGAAGAAGTGGACATGAAGGTTGAGATATTGGTGTCAAAACAAAG GGTTGACGAATACGGAGAGGTCCTAGTGTGGATAAATTTCATGACAGTGT CAATACCTGACTTCCCGAGTTTACAACCGCATATTCTTTACCCTCGTCCT ACTTACTTTGTTGACGGCGAAAAGAGGTTATTTGTGTGTGCTTTTGATGA AACCGAGCATCTATGCATCTACATTGTCAAGGGAGATGTGCTGAGTAAGA TTCCAATAGATTCTGTGTTGGGTGATATTTTCTTTACTACCTATATGAGT TATATTCCTAGTTTTAACTCCATTCCTTGTGTGTCAAGGGAGAGTGAAAG ATTCCAATAG back to topprotein sequence of A01p05550.1_BnaDARv10-RA >A01p05550.1_BnaDARv10-PA ID=A01p05550.1_BnaDARv10-PA|Name=A01p05550.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=370bp
MPQQLPKDLIGDILCLLPLKSLARFRAVCKEWNTIWEDKSFSNHYLSRMR PQFMVATKYQTCSIEINLDEEDHVLSSIVERDITLEYPCETHTSIGYCDG FVLFCMYKKGFAIWNPWVRQNKFIENQEFDFCGIGYDVTGYKIFGLMSFY DSSGEDNYKVAIYECKSEVWKFINDTGLEPRRLIMQDNIVSIKGNLYVIA IDRKTRESFLQSFDFSEDQFKTICANLPSMEGCFTGLLAVFRGDRVSLLM QSEEVDMKVEILVSKQRVDEYGEVLVWINFMTVSIPDFPSLQPHILYPRP TYFVDGEKRLFVCAFDETEHLCIYIVKGDVLSKIPIDSVLGDIFFTTYMS YIPSFNSIPCVSRESERFQ. back to topmRNA from alignment at A01_BnaDARv10:2488493..2489602- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >A01p05550.1_BnaDARv10-RA ID=A01p05550.1_BnaDARv10-RA|Name=A01p05550.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=1110bp|location=Sequence derived from alignment at A01_BnaDARv10:2488493..2489602- (Brassica napus) ATGCCGCAACAATTACCAAAAGACTTGATAGGAGACATCCTTTGTCTCTT
GCCACTGAAATCTCTTGCCAGATTCAGAGCTGTGTGTAAGGAATGGAACA
CTATTTGGGAAGATAAGAGTTTTTCGAACCACTACTTGTCTCGCATGCGT
CCTCAATTCATGGTAGCGACCAAGTACCAGACTTGTTCGATAGAAATCAA
TCTCGACGAGGAGGACCATGTTTTGTCGTCGATAGTGGAGCGTGATATAA
CTTTAGAATATCCATGTGAAACACATACATCAATAGGTTATTGTGATGGG
TTCGTGTTATTTTGTATGTACAAGAAAGGGTTTGCGATTTGGAACCCTTG
GGTAAGACAGAATAAGTTTATAGAGAATCAAGAATTCGATTTCTGTGGCA
TAGGGTACGATGTTACGGGTTACAAGATATTTGGATTGATGTCTTTTTAC
GATAGTAGTGGAGAAGACAACTACAAAGTTGCCATCTACGAGTGCAAATC
TGAGGTGTGGAAGTTTATTAATGACACTGGTCTTGAACCACGACGTCTGA
TAATGCAAGATAATATCGTGTCTATTAAAGGGAATTTATATGTTATTGCT
ATCGATAGAAAAACTCGTGAATCTTTCCTCCAGTCCTTTGATTTCTCAGA
GGATCAATTCAAGACTATTTGTGCTAATTTACCTAGTATGGAAGGTTGCT
TTACAGGACTCCTTGCGGTTTTCAGGGGAGATCGAGTTTCCTTGTTAATG
CAATCAGAAGAAGTGGACATGAAGGTTGAGATATTGGTGTCAAAACAAAG
GGTTGACGAATACGGAGAGGTCCTAGTGTGGATAAATTTCATGACAGTGT
CAATACCTGACTTCCCGAGTTTACAACCGCATATTCTTTACCCTCGTCCT
ACTTACTTTGTTGACGGCGAAAAGAGGTTATTTGTGTGTGCTTTTGATGA
AACCGAGCATCTATGCATCTACATTGTCAAGGGAGATGTGCTGAGTAAGA
TTCCAATAGATTCTGTGTTGGGTGATATTTTCTTTACTACCTATATGAGT
TATATTCCTAGTTTTAACTCCATTCCTTGTGTGTCAAGGGAGAGTGAAAG
ATTCCAATAG back to topCoding sequence (CDS) from alignment at A01_BnaDARv10:2488493..2489602- >A01p05550.1_BnaDARv10-RA ID=A01p05550.1_BnaDARv10-RA|Name=A01p05550.1_BnaDARv10-RA|organism=Brassica napus|type=CDS|length=1110bp|location=Sequence derived from alignment at A01_BnaDARv10:2488493..2489602- (Brassica napus) ATGCCGCAACAATTACCAAAAGACTTGATAGGAGACATCCTTTGTCTCTT GCCACTGAAATCTCTTGCCAGATTCAGAGCTGTGTGTAAGGAATGGAACA CTATTTGGGAAGATAAGAGTTTTTCGAACCACTACTTGTCTCGCATGCGT CCTCAATTCATGGTAGCGACCAAGTACCAGACTTGTTCGATAGAAATCAA TCTCGACGAGGAGGACCATGTTTTGTCGTCGATAGTGGAGCGTGATATAA CTTTAGAATATCCATGTGAAACACATACATCAATAGGTTATTGTGATGGG TTCGTGTTATTTTGTATGTACAAGAAAGGGTTTGCGATTTGGAACCCTTG GGTAAGACAGAATAAGTTTATAGAGAATCAAGAATTCGATTTCTGTGGCA TAGGGTACGATGTTACGGGTTACAAGATATTTGGATTGATGTCTTTTTAC GATAGTAGTGGAGAAGACAACTACAAAGTTGCCATCTACGAGTGCAAATC TGAGGTGTGGAAGTTTATTAATGACACTGGTCTTGAACCACGACGTCTGA TAATGCAAGATAATATCGTGTCTATTAAAGGGAATTTATATGTTATTGCT ATCGATAGAAAAACTCGTGAATCTTTCCTCCAGTCCTTTGATTTCTCAGA GGATCAATTCAAGACTATTTGTGCTAATTTACCTAGTATGGAAGGTTGCT TTACAGGACTCCTTGCGGTTTTCAGGGGAGATCGAGTTTCCTTGTTAATG CAATCAGAAGAAGTGGACATGAAGGTTGAGATATTGGTGTCAAAACAAAG GGTTGACGAATACGGAGAGGTCCTAGTGTGGATAAATTTCATGACAGTGT CAATACCTGACTTCCCGAGTTTACAACCGCATATTCTTTACCCTCGTCCT ACTTACTTTGTTGACGGCGAAAAGAGGTTATTTGTGTGTGCTTTTGATGA AACCGAGCATCTATGCATCTACATTGTCAAGGGAGATGTGCTGAGTAAGA TTCCAATAGATTCTGTGTTGGGTGATATTTTCTTTACTACCTATATGAGT TATATTCCTAGTTTTAACTCCATTCCTTGTGTGTCAAGGGAGAGTGAAAG ATTCCAATAG back to top
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