C09p75770.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	C09p75770.1_BnaDARv10-RA
Unique Name	C09p75770.1_BnaDARv10-PA
Type	polypeptide
Organism	Brassica napus (cv. Darmor-bzh, rapeseed)
Sequence length	437

Homology

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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: CDY43229.1 (BnaC05g48220D [Brassica napus] >VDD47529.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 877 bits (2265), Expect = 0.000e+0
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0

Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436

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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF2548143.1 (hypothetical protein F2Q70_00024106 [Brassica cretica])

HSP 1 Score: 869 bits (2245), Expect = 0.000e+0
Identity = 432/436 (99.08%), Postives = 434/436 (99.54%), Query Frame = 0

Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGG EADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLE+DDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVR IFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADE+SMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVVKANGGCEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEEDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRIIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEVSMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436

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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013587530.1 (PREDICTED: mannose-6-phosphate isomerase 1 [Brassica oleracea var. oleracea])

HSP 1 Score: 865 bits (2236), Expect = 0.000e+0
Identity = 433/436 (99.31%), Postives = 434/436 (99.54%), Query Frame = 0

Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGG EADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTH+SGPSYLEDD ADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVVKANGGCEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHQSGPSYLEDD-ADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 435

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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009147339.1 (mannose-6-phosphate isomerase 1 [Brassica rapa] >RID64651.1 hypothetical protein BRARA_E03572 [Brassica rapa] >VDC73421.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 862 bits (2228), Expect = 1.210e-315
Identity = 432/436 (99.08%), Postives = 432/436 (99.08%), Query Frame = 0

Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGG EADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGG   VTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVVKANGGCEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGG---VTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 433

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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013661461.1 (mannose-6-phosphate isomerase 1 isoform X2 [Brassica napus] >XP_022568654.1 mannose-6-phosphate isomerase 1 isoform X1 [Brassica napus] >CDY57541.1 BnaA05g33470D [Brassica napus])

HSP 1 Score: 861 bits (2224), Expect = 3.640e-315
Identity = 431/436 (98.85%), Postives = 432/436 (99.08%), Query Frame = 0

Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGG EADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGG   VTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHL+SSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVVKANGGCEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGG---VTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLESSSDLKLYRAGINSRFLDSP 433

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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018493260.1 (PREDICTED: mannose-6-phosphate isomerase 1 [Raphanus sativus])

HSP 1 Score: 838 bits (2165), Expect = 3.250e-306
Identity = 420/436 (96.33%), Postives = 427/436 (97.94%), Query Frame = 0

Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATV+KANGG EADRRR LRRLRCSVKDYAWGKIGSDSLVYRV+AANSD+ ID+TRPYAELWMGTHESGPSYLEDDD   GSDGVTLRSWIAENPE+LGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDK LAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRA+PEIEELVGSEE NQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLT+KERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLT KPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVLKANGGCEADRRR-LRRLRCSVKDYAWGKIGSDSLVYRVHAANSDREIDATRPYAELWMGTHESGPSYLEDDD---GSDGVTLRSWIAENPESLGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKNLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAVPEIEELVGSEEVNQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTEKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTPKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 432

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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: CAA7038563.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 810 bits (2092), Expect = 4.330e-295
Identity = 408/435 (93.79%), Postives = 418/435 (96.09%), Query Frame = 0

Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDS 435
            MEIATVVKANGG EADRR  LRRL+CSVKDY WGKIGSDSLVYRVYAANSD  IDSTRPYAELWMGTHESGPSYLED D   GS+GVTLRSWIAENP++LGDRVLEKWGCDLPFLFKVLSV R LSIQ+HPDK LAKK+HKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVG+EEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIV KLK RLHMESQER LTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGEC+EVMATSDNVVRAGLT+KPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAG+NSRFL S
Sbjct:    1 MEIATVVKANGGCEADRRW-LRRLKCSVKDYDWGKIGSDSLVYRVYAANSDDQIDSTRPYAELWMGTHESGPSYLEDAD---GSNGVTLRSWIAENPKSLGDRVLEKWGCDLPFLFKVLSVARPLSIQAHPDKNLAKKMHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGNEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVFKLKRRLHMESQERQLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECLEVMATSDNVVRAGLTNKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGVNSRFLYS 431

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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: CDY54299.1 (BnaC01g41980D [Brassica napus])

HSP 1 Score: 807 bits (2085), Expect = 4.340e-294
Identity = 404/418 (96.65%), Postives = 407/418 (97.37%), Query Frame = 0

Query:   18 RRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDS 435
            RRRL RLRCSVKDYAWGKIGSDSLVYRVYA NSD  IDSTRPYAELWMGTHESGPSYLEDD     +DGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEI LKSSSDLKLYRAG+N+RFL S
Sbjct:   15 RRRLHRLRCSVKDYAWGKIGSDSLVYRVYAVNSDGQIDSTRPYAELWMGTHESGPSYLEDD-----ADGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIQLKSSSDLKLYRAGVNNRFLYS 427

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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_006408404.1 (mannose-6-phosphate isomerase 1 [Eutrema salsugineum] >ESQ49857.1 hypothetical protein EUTSA_v10020776mg [Eutrema salsugineum])

HSP 1 Score: 804 bits (2076), Expect = 1.190e-292
Identity = 405/436 (92.89%), Postives = 416/436 (95.41%), Query Frame = 0

Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGG EADRRR LRRL+CSVKDY WGKIGSDSLVYRVYAANSD  IDSTRPYAELWMGTHESGPSYL D D   GS+G+TLRSWI ENP++LG+RVLEKWGCDLPFLFKVLSV R LSIQ+HPDK LAKK+HKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIV KLK RLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVL GEGR+STDASADEISMGDVLFVPADTEI LKSS DLKLYRAG+N+RFL SP
Sbjct:    1 MEIATVVKANGGCEADRRR-LRRLKCSVKDYDWGKIGSDSLVYRVYAANSDYQIDSTRPYAELWMGTHESGPSYLADAD---GSNGMTLRSWITENPKSLGNRVLEKWGCDLPFLFKVLSVARPLSIQAHPDKNLAKKMHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVFKLKRRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLLGEGRVSTDASADEISMGDVLFVPADTEIQLKSSFDLKLYRAGVNNRFLYSP 432

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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_010463670.1 (PREDICTED: mannose-6-phosphate isomerase 1 [Camelina sativa])

HSP 1 Score: 794 bits (2050), Expect = 1.090e-288
Identity = 401/435 (92.18%), Postives = 414/435 (95.17%), Query Frame = 0

Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDS 435
            MEI TVVKANGG EADRRR LRRLRCSVKDY WGKIGSDSLVYRVYAANSD  ID TRPYAELWMGTHESGPSYLED D   GS+GVTLRSWIAENP++LG+RVLEKWGCDLPFLFKVLSV RALSIQ+HPDK LAKK+HKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKS VRTIFTLLMSA PDTTK+IV KLK RLHMESQER LTDKERLVLKLEKQYP+DIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQ+LCSMLSYKLG+PEILKGSRIRPYITRYLPPFEEFEVDLCDLP GASTVFPSVPGPSLLLVLQGEGRMST+ASAD ISMGDVLFVPADTEIHL+SSSDLKLYRAG+NSRFL S
Sbjct:    1 MEIVTVVKANGGCEADRRR-LRRLRCSVKDYDWGKIGSDSLVYRVYAANSDVQIDPTRPYAELWMGTHESGPSYLEDAD---GSNGVTLRSWIAENPKSLGNRVLEKWGCDLPFLFKVLSVARALSIQAHPDKKLAKKMHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSVVRTIFTLLMSADPDTTKKIVFKLKRRLHMESQERQLTDKERLVLKLEKQYPNDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQSLCSMLSYKLGYPEILKGSRIRPYITRYLPPFEEFEVDLCDLPSGASTVFPSVPGPSLLLVLQGEGRMSTEASADGISMGDVLFVPADTEIHLRSSSDLKLYRAGVNSRFLYS 431

The following BLAST results are available for this feature:

BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein

BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20

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POSITION

0


Match Name	E-value	Identity	Description
CDY43229.1	0.000e+0	100.00	BnaC05g48220D [Brassica napus] >VDD47529.1 unnamed...	[more]
KAF2548143.1	0.000e+0	99.08	hypothetical protein F2Q70_00024106 [Brassica cret...	[more]
XP_013587530.1	0.000e+0	99.31	PREDICTED: mannose-6-phosphate isomerase 1 [Brassi...	[more]
XP_009147339.1	1.210e-315	99.08	mannose-6-phosphate isomerase 1 [Brassica rapa] >R...	[more]
XP_013661461.1	3.640e-315	98.85	mannose-6-phosphate isomerase 1 isoform X2 [Brassi...	[more]
XP_018493260.1	3.250e-306	96.33	PREDICTED: mannose-6-phosphate isomerase 1 [Raphan...	[more]
CAA7038563.1	4.330e-295	93.79	unnamed protein product [Microthlaspi erraticum]	[more]
CDY54299.1	4.340e-294	96.65	BnaC01g41980D [Brassica napus]	[more]
XP_006408404.1	1.190e-292	92.89	mannose-6-phosphate isomerase 1 [Eutrema salsugine...	[more]
XP_010463670.1	1.090e-288	92.18	PREDICTED: mannose-6-phosphate isomerase 1 [Cameli...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0000032	cell wall mannoprotein biosynthetic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009298	GDP-mannose biosynthetic process
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0032025	response to cobalt ion
biological_process	GO:0033591	response to L-ascorbic acid
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0010043	response to zinc ion
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004476	mannose-6-phosphate isomerase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17

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POSITION

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 240..260
None	No IPR available	GENE3D	1.10.441.10	Phosphomannose Isomerase, domain 2	coord: 171..336 e-value: 6.0E-132 score: 442.7
None	No IPR available	PIRSR	PIRSR001480-1	PIRSR001480-1	coord: 29..427 e-value: 7.4E-126 score: 418.4
None	No IPR available	PIRSR	PIRSR001480-2	PIRSR001480-2	coord: 29..427 e-value: 7.4E-126 score: 418.4
None	No IPR available	PANTHER	PTHR10309:SF9	MANNOSE-6-PHOSPHATE ISOMERASE 1	coord: 5..434
None	No IPR available	CDD	cd07011	cupin_PMI_type_I_N	coord: 26..330 e-value: 6.51588E-121 score: 350.311
IPR016305	Mannose-6-phosphate isomerase	PRINTS	PR00714	MAN6PISMRASE	coord: 59..74 score: 69.38 coord: 24..42 score: 48.95 coord: 257..272 score: 43.12 coord: 147..170 score: 65.42 coord: 273..292 score: 54.5 coord: 112..133 score: 70.45 coord: 292..311 score: 66.5 coord: 311..330 score: 51.5
IPR016305	Mannose-6-phosphate isomerase	PIRSF	PIRSF001480	PMI	coord: 18..433 e-value: 1.7E-128 score: 427.4
IPR016305	Mannose-6-phosphate isomerase	PANTHER	PTHR10309	MANNOSE-6-PHOSPHATE ISOMERASE	coord: 5..434
IPR001250	Mannose-6-phosphate isomerase, type I	PFAM	PF01238	PMI_typeI	coord: 22..392 e-value: 8.6E-106 score: 354.3
IPR001250	Mannose-6-phosphate isomerase, type I	TIGRFAM	TIGR00218	TIGR00218	coord: 21..418 e-value: 7.5E-74 score: 247.0
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 25..312 e-value: 6.0E-132 score: 442.7
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 23..426 e-value: 6.0E-132 score: 442.7
IPR018050	Phosphomannose isomerase, type I, conserved site	PROSITE	PS00965	PMI_I_1	coord: 147..155
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 20..429

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C09_BnaDARv10	contig	C09_BnaDARv10:66109626..66111666 + View in Apollo

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on Darmor-bzh OGS10 v10	2021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR	2021-04-17
Blast2GO on Darmor-bzh OGS10 v10	2021-04-17
Darmor-bzh OGS10 v10	2020-07-22

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
C09p75770.1_BnaDARv10-RA	C09p75770.1_BnaDARv10-RA	Brassica napus	mRNA	C09_BnaDARv10 66109556..66111666 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>C09p75770.1_BnaDARv10-PA ID=C09p75770.1_BnaDARv10-PA|Name=C09p75770.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=437bp
MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANS
DQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEAL
GDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDD
NHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCI
SEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDK
ERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECI
EVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRY
LPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEIS
MGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011051	RmlC_Cupin_sf
IPR018050	Pmannose_isomerase-type1_CS
IPR014710	RmlC-like_jellyroll
IPR001250	Man6P_Isoase-1
IPR016305	Mannose-6-P_Isomerase

Vocabulary: **Biological Process**
Term	Definition
GO:0046686	response to cadmium ion
GO:0033591	response to L-ascorbic acid
GO:0032025	response to cobalt ion
GO:0010043	response to zinc ion
GO:0009793	embryo development ending in seed dormancy
GO:0009416	response to light stimulus
GO:0009298	GDP-mannose biosynthetic process
GO:0006486	protein glycosylation
GO:0005975	carbohydrate metabolic process
GO:0000032	cell wall mannoprotein biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0004476	mannose-6-phosphate isomerase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005829	cytosol

Orthology

View orthology data for C09p75770.1_BnaDARv10-PA

Metabolic Model

View data from metabolic model for C09p75770.1_BnaDARv10-PA