C09p70490.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	C09p70490.1_BnaDARv10-RA
Unique Name	C09p70490.1_BnaDARv10-PA
Type	polypeptide
Organism	Brassica napus (cv. Darmor-bzh, rapeseed)
Sequence length	453

Homology

[Close]

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Match: CDY57982.1 (BnaA10g30300D [Brassica napus])

HSP 1 Score: 923 bits (2385), Expect = 0.000e+0
Identity = 442/452 (97.79%), Postives = 446/452 (98.67%), Query Frame = 0

Query:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFMVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452
            MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVEL FPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNG+HGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSF+VKSERLPLCVEPEMLPTHVLR FPTFGSVLRIIVENV EKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQ F+PQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLN+L GGD INEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK
Sbjct:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELDFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGEHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFVVKSERLPLCVEPEMLPTHVLRKFPTFGSVLRIIVENVTEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQPFTPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNRLFGGDGINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452

[Close]

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD20765.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 922 bits (2382), Expect = 0.000e+0
Identity = 444/457 (97.16%), Postives = 449/457 (98.25%), Query Frame = 0

Query:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFMVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQR-----EKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452
            MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKF+ARTNRALPRVESIGD+IFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLS+LREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSF+VKSERLPLCVEPEMLPTHVLR FPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQR     EKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLN+L GGD INEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK
Sbjct:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFVARTNRALPRVESIGDVIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSSLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFVVKSERLPLCVEPEMLPTHVLRKFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQRLKMCREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNRLFGGDGINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 457

[Close]

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Match: RID42725.1 (hypothetical protein BRARA_J02588 [Brassica rapa])

HSP 1 Score: 918 bits (2372), Expect = 0.000e+0
Identity = 443/452 (98.01%), Postives = 445/452 (98.45%), Query Frame = 0

Query:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFMVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452
            MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVEL FPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNG+HGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSF+VKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENV EKQAIQ   PGQHVK LNLF QVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK
Sbjct:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELDFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGEHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFVVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVTEKQAIQ---PGQHVKFLNLFLQVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 449

[Close]

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009122238.1 (protection of telomeres protein 1b isoform X4 [Brassica rapa] >XP_013715577.1 protection of telomeres protein 1b-like isoform X3 [Brassica napus] >XP_022549410.1 protection of telomeres protein 1b-like isoform X4 [Brassica napus])

HSP 1 Score: 917 bits (2371), Expect = 0.000e+0
Identity = 443/452 (98.01%), Postives = 445/452 (98.45%), Query Frame = 0

Query:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFMVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452
            MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVEL FPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLS+LREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSF+VKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENV EKQAIQ   PGQHVK LNLF QVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK
Sbjct:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELDFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSSLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFVVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVTEKQAIQ---PGQHVKFLNLFLQVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 449

[Close]

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Match: RID42723.1 (hypothetical protein BRARA_J02588 [Brassica rapa])

HSP 1 Score: 912 bits (2356), Expect = 0.000e+0
Identity = 443/457 (96.94%), Postives = 445/457 (97.37%), Query Frame = 0

Query:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFMVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQR-----EKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452
            MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVEL FPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNG+HGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSF+VKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENV EKQAIQ   PGQHVK LNLF QVNMGLWSATFSPSTKMQYTMSRETQSFSPQR     EKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK
Sbjct:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELDFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGEHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFVVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVTEKQAIQ---PGQHVKFLNLFLQVNMGLWSATFSPSTKMQYTMSRETQSFSPQRLKMCREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 454

[Close]

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009122237.1 (protection of telomeres protein 1b isoform X3 [Brassica rapa] >XP_013715576.1 protection of telomeres protein 1b-like isoform X1 [Brassica napus] >XP_022549409.1 protection of telomeres protein 1b-like isoform X2 [Brassica napus])

HSP 1 Score: 911 bits (2355), Expect = 0.000e+0
Identity = 443/457 (96.94%), Postives = 445/457 (97.37%), Query Frame = 0

Query:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFMVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQR-----EKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452
            MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVEL FPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLS+LREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSF+VKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENV EKQAIQ   PGQHVK LNLF QVNMGLWSATFSPSTKMQYTMSRETQSFSPQR     EKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK
Sbjct:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELDFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSSLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFVVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVTEKQAIQ---PGQHVKFLNLFLQVNMGLWSATFSPSTKMQYTMSRETQSFSPQRLKMCREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 454

[Close]

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_033137761.1 (protection of telomeres protein 1b isoform X2 [Brassica rapa])

HSP 1 Score: 899 bits (2324), Expect = 0.000e+0
Identity = 443/488 (90.78%), Postives = 445/488 (91.19%), Query Frame = 0

Query:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQ------------------------------------IVHVSKDDKDRCYIFVWDGTEMPPCSFMVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452
            MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVEL FPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLS+LREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQ                                    IVHVSKDDKDRCYIFVWDGTEMPPCSF+VKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENV EKQAIQ   PGQHVK LNLF QVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK
Sbjct:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELDFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSSLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQVDLFGFFLSFYLRNWTCSGWRLWSFDIVSHYLLPFKIVHVSKDDKDRCYIFVWDGTEMPPCSFVVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVTEKQAIQ---PGQHVKFLNLFLQVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 485

[Close]

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_033137760.1 (protection of telomeres protein 1b isoform X1 [Brassica rapa])

HSP 1 Score: 893 bits (2308), Expect = 0.000e+0
Identity = 443/493 (89.86%), Postives = 445/493 (90.26%), Query Frame = 0

Query:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQ------------------------------------IVHVSKDDKDRCYIFVWDGTEMPPCSFMVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQR-----EKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452
            MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVEL FPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLS+LREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQ                                    IVHVSKDDKDRCYIFVWDGTEMPPCSF+VKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENV EKQAIQ   PGQHVK LNLF QVNMGLWSATFSPSTKMQYTMSRETQSFSPQR     EKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK
Sbjct:    1 MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELDFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSSLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQVDLFGFFLSFYLRNWTCSGWRLWSFDIVSHYLLPFKIVHVSKDDKDRCYIFVWDGTEMPPCSFVVKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVTEKQAIQ---PGQHVKFLNLFLQVNMGLWSATFSPSTKMQYTMSRETQSFSPQRLKMCREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 490

[Close]

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Match: ACJ49162.1 (protection of telomeres 1b protein [Brassica oleracea])

HSP 1 Score: 891 bits (2302), Expect = 0.000e+0
Identity = 429/450 (95.33%), Postives = 438/450 (97.33%), Query Frame = 0

Query:    4 MEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFMVKSERLPLCVEPEM-LPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452
            MEIRDDYKFLRVEDAFKALHLNISLIGVIVEL FPTASDCSCTL+IIDPWHSGSGLPVKFIAR NRALPRVESIGD+IFLS+VKIVLVNRKITAL NETSSSFALFNG+ GEGFVPYQSSPKFRIR+QDKSFLSNLREWMITYKF+DGSCCFTSLKDIKEGE+LNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSF+ KSERLPLCVEPEM LPTHVLRTFPTFGSVLRIIVENV EKQAIQCLQPGQHVK LNLF QVNMGLWSATFSPSTKMQYTMSRE QSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMD+LTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYR KND WGSRRFRIFDTWINAK
Sbjct:    1 MEIRDDYKFLRVEDAFKALHLNISLIGVIVELDFPTASDCSCTLKIIDPWHSGSGLPVKFIARANRALPRVESIGDVIFLSSVKIVLVNRKITALYNETSSSFALFNGEPGEGFVPYQSSPKFRIRDQDKSFLSNLREWMITYKFDDGSCCFTSLKDIKEGEHLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFVAKSERLPLCVEPEMMLPTHVLRTFPTFGSVLRIIVENVTEKQAIQCLQPGQHVKFLNLFLQVNMGLWSATFSPSTKMQYTMSREMQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDILTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRNKNDLWGSRRFRIFDTWINAK 450

[Close]

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013608787.1 (PREDICTED: protection of telomeres protein 1b [Brassica oleracea var. oleracea])

HSP 1 Score: 891 bits (2302), Expect = 0.000e+0
Identity = 428/450 (95.11%), Postives = 439/450 (97.56%), Query Frame = 0

Query:    4 MEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRIIDPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCNETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFEDGSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFMVKSERLPLCVEPEM-LPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQHVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWINAK 452
            MEIRDDYKFLRVEDAFKALHLNISLIGVIVEL FPTASDCSCTL+IIDPWHSGSGLPVK IAR NR+LPRVESIGD+IFLS+VKIVLVNRKITALCNETSSSFALFNG+HGEGFVPYQSSPKFRIR+QDKSFLSNLREWMITYKF+DGSCCFTSLKDIKEGE+LNLNCQIVHVSKDDKDRCYIFVWDGTEMP CSF+VKSERLPLCVEPEM LPTHVLRTFPTFGSVLRIIVENV EKQAIQ L+PGQHVK LNLF QVNMGLWSATFSPSTKMQYTMSRE QSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDR+NEAPRNPPWVQCCLFSYYR KNDQWGSRRFRIFDTWINAK
Sbjct:    1 MEIRDDYKFLRVEDAFKALHLNISLIGVIVELDFPTASDCSCTLKIIDPWHSGSGLPVKLIARANRSLPRVESIGDVIFLSSVKIVLVNRKITALCNETSSSFALFNGEHGEGFVPYQSSPKFRIRDQDKSFLSNLREWMITYKFDDGSCCFTSLKDIKEGEHLNLNCQIVHVSKDDKDRCYIFVWDGTEMPACSFVVKSERLPLCVEPEMMLPTHVLRTFPTFGSVLRIIVENVTEKQAIQGLKPGQHVKFLNLFLQVNMGLWSATFSPSTKMQYTMSREMQSFSPQREKFSSRWNPITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFPRDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALIKKLNKLLGGDRMNEAPRNPPWVQCCLFSYYRNKNDQWGSRRFRIFDTWINAK 450

The following BLAST results are available for this feature:

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein

BLAST of C09p70490.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
CDY57982.1	0.000e+0	97.79	BnaA10g30300D [Brassica napus]	[more]
VDD20765.1	0.000e+0	97.16	unnamed protein product [Brassica rapa]	[more]
RID42725.1	0.000e+0	98.01	hypothetical protein BRARA_J02588 [Brassica rapa]	[more]
XP_009122238.1	0.000e+0	98.01	protection of telomeres protein 1b isoform X4 [Bra...	[more]
RID42723.1	0.000e+0	96.94	hypothetical protein BRARA_J02588 [Brassica rapa]	[more]
XP_009122237.1	0.000e+0	96.94	protection of telomeres protein 1b isoform X3 [Bra...	[more]
XP_033137761.1	0.000e+0	90.78	protection of telomeres protein 1b isoform X2 [Bra...	[more]
XP_033137760.1	0.000e+0	89.86	protection of telomeres protein 1b isoform X1 [Bra...	[more]
ACJ49162.1	0.000e+0	95.33	protection of telomeres 1b protein [Brassica olera...	[more]
XP_013608787.1	0.000e+0	95.11	PREDICTED: protection of telomeres protein 1b [Bra...	[more]

Pages

1
2
next ›
last »

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051974	negative regulation of telomerase activity
biological_process	GO:0032210	regulation of telomere maintenance via telomerase
biological_process	GO:0016233	telomere capping
cellular_component	GO:0000783	nuclear telomere cap complex
molecular_function	GO:0098505	G-rich strand telomeric DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0010521	telomerase inhibitor activity

InterPro

Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011564	Telomeric single stranded DNA binding POT1/Cdc13	SMART	SM00976	Telo_bind_a_2	coord: 12..144 e-value: 5.7E-27 score: 105.6
IPR011564	Telomeric single stranded DNA binding POT1/Cdc13	PFAM	PF02765	POT1	coord: 13..143 e-value: 4.2E-23 score: 81.8
None	No IPR available	GENE3D	2.40.50.140		coord: 11..150 e-value: 4.1E-27 score: 96.7
None	No IPR available	GENE3D	2.40.50.140		coord: 157..289 e-value: 2.1E-11 score: 45.7
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 41..452
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..40
None	No IPR available	CDD	cd04497	hPOT1_OB1_like	coord: 10..143 e-value: 9.71918E-36 score: 127.006
IPR032042	Protection of telomeres protein 1, ssDNA-binding domain	PFAM	PF16686	POT1PC	coord: 158..198 e-value: 2.3E-7 score: 30.8
IPR028389	Protection of telomeres protein 1	PANTHER	PTHR14513	PROTECTION OF TELOMERES 1	coord: 7..450
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 11..146
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 156..263

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C09_BnaDARv10	contig	C09_BnaDARv10:62947225..62949459 - View in Apollo

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on Darmor-bzh OGS10 v10	2021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR	2021-04-17
Blast2GO on Darmor-bzh OGS10 v10	2021-04-17
Darmor-bzh OGS10 v10	2020-07-22

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
C09p70490.1_BnaDARv10-RA	C09p70490.1_BnaDARv10-RA	Brassica napus	mRNA	C09_BnaDARv10 62947139..62949465 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>C09p70490.1_BnaDARv10-PA ID=C09p70490.1_BnaDARv10-PA|Name=C09p70490.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=453bp
MINMEIRDDYKFLRVEDAFKALHLNISLIGVIVELSFPTASDCSCTLRII
DPWHSGSGLPVKFIARTNRALPRVESIGDIIFLSNVKIVLVNRKITALCN
ETSSSFALFNGKHGEGFVPYQSSPKFRIREQDKSFLSNLREWMITYKFED
GSCCFTSLKDIKEGEYLNLNCQIVHVSKDDKDRCYIFVWDGTEMPPCSFM
VKSERLPLCVEPEMLPTHVLRTFPTFGSVLRIIVENVAEKQAIQCLQPGQ
HVKLLNLFFQVNMGLWSATFSPSTKMQYTMSRETQSFSPQREKFSSRWNP
ITRCISSPSHSGITGVAHEDAPFVTLMDMLTYSNVTAKFRCVVRFIQVFP
RDVRNFHDLNGKFKLLAILEDATARIHASLYADEGDKFFGCDPSDEEALI
KKLNKLLGGDRINEAPRNPPWVQCCLFSYYRVKNDQWGSRRFRIFDTWIN
AK.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012340	NA-bd_OB-fold
IPR028389	POT1
IPR032042	POT1PC
IPR011564	Telomer_end-bd_POT1/Cdc13

Vocabulary: **Cellular Component**
Term	Definition
GO:0000783	nuclear telomere cap complex

Vocabulary: **Biological Process**
Term	Definition
GO:0051974	negative regulation of telomerase activity
GO:0016233	telomere capping
GO:0032210	regulation of telomere maintenance via telomerase

Vocabulary: **Molecular Function**
Term	Definition
GO:0010521	telomerase inhibitor activity
GO:0098505	G-rich strand telomeric DNA binding
GO:0005515	protein binding
GO:0003723	RNA binding

Orthology

View orthology data for C09p70490.1_BnaDARv10-PA

Metabolic Model

View data from metabolic model for C09p70490.1_BnaDARv10-PA