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Homology
BLAST of C09p69950.1_BnaDARv10-RA vs. GenBank_protein
Match: VDC99012.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 116 bits (290), Expect = 1.370e-31 Identity = 63/78 (80.77%), Postives = 63/78 (80.77%), Query Frame = 0 Query: 34 MDPFGDXXXXXXXXXXXXXGAKKDTKKPKGRRKMKSAADLTRRLMKAETDVQPEALKVVNLEDLYGTLATTQVNFEDL 111
MD FGD GAKKDTKKPKGRRKMKSAADLTRRLMKAETDVQPEALKVVNLEDLYGTLATT VNFEDL
Sbjct: 1 MDSFGDETEEKKKAAEEKEGAKKDTKKPKGRRKMKSAADLTRRLMKAETDVQPEALKVVNLEDLYGTLATTLVNFEDL 78
BLAST of C09p69950.1_BnaDARv10-RA vs. GenBank_protein
Match: CDY18065.1 (BnaA01g23260D [Brassica napus]) HSP 1 Score: 80.9 bits (198), Expect = 5.900e-18 Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0 Query: 67 MKSAADLTRRLMKAETDVQPEALKVVNLEDLYGTLATTQVNFEDL 111
MKSAA +TRRLMKAETDVQPEALKVVNLEDLYGTLATT VNFEDL
Sbjct: 1 MKSAAYVTRRLMKAETDVQPEALKVVNLEDLYGTLATTLVNFEDL 45
The following BLAST results are available for this feature:
BLAST of C09p69950.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 ( Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 2
| Match Name | E-value | Identity | Description | |
|---|
| VDC99012.1 | 1.370e-31 | 80.77 | unnamed protein product [Brassica oleracea] | [more] |
| CDY18065.1 | 5.900e-18 | 93.33 | BnaA01g23260D [Brassica napus] | [more] |
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InterPro
Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 24..70 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 40..57 |
| None | No IPR available | PANTHER | PTHR11595 | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | coord: 11..64 |
| None | No IPR available | PANTHER | PTHR11595:SF74 | BNAC09G38180D PROTEIN | coord: 11..64 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >C09p69950.1_BnaDARv10-PA ID=C09p69950.1_BnaDARv10-PA|Name=C09p69950.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=112bp
MQSLNSRLIHILRDKARVEQLLRYAPAADDDDDMDPFGDETEEEKKAAEE
KEGAKKDTKKPKGRRKMKSAADLTRRLMKAETDVQPEALKVVNLEDLYGT
LATTQVNFEDL. back to top
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