C09p69770.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	C09p69770.1_BnaDARv10-RA
Unique Name	C09p69770.1_BnaDARv10-PA
Type	polypeptide
Organism	Brassica napus (cv. Darmor-bzh, rapeseed)
Sequence length	350

Homology

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BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD34399.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 701 bits (1809), Expect = 7.720e-255
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0

Query:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLNDMDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349
            MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLNDMDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI
Sbjct:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLNDMDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349

[Close]

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013609260.1 (PREDICTED: LOW QUALITY PROTEIN: transcription factor MYB29 [Brassica oleracea var. oleracea])

HSP 1 Score: 693 bits (1788), Expect = 1.790e-251
Identity = 349/359 (97.21%), Postives = 349/359 (97.21%), Query Frame = 0

Query:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLND----------MDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349
            MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLND          MDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI
Sbjct:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLNDVFSETSXISQMDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 359

[Close]

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF3564134.1 (hypothetical protein DY000_02019583 [Brassica cretica])

HSP 1 Score: 681 bits (1758), Expect = 6.430e-247
Identity = 343/358 (95.81%), Postives = 346/358 (96.65%), Query Frame = 0

Query:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLND---------MDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349
            MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNP NLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLS TSKLLNKVATKASSIGN+LSASMEGSLIRSTTLSPCLND         MDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQ+LLLSDVSSTSV EDN+MQNITGWSNYLVDDSDFPYDTNQDFDDKNFI
Sbjct:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPSNLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSCTSKLLNKVATKASSIGNILSASMEGSLIRSTTLSPCLNDVFSETSQFQMDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQELLLSDVSSTSVYEDNMMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 358

[Close]

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018443170.1 (PREDICTED: transcription factor MYB29 [Raphanus sativus])

HSP 1 Score: 650 bits (1676), Expect = 1.950e-234
Identity = 330/358 (92.18%), Postives = 336/358 (93.85%), Query Frame = 0

Query:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLND---------MDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349
            MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWS IARHLPKRTDNEVKNYWNTHLKKRL+DQGIDPLTHKPLASNPNPATP TSEGQDDSNP NLDEQSQSGSMSPKSLP SSSSC+LQ I NSDETPRNNGSLSS KCRFKK SSTSKLLNKVATKASSIGNM+SASMEGSLIRSTT SPCLND         MDEF PFSHSS+QHITDHM EDINMDFDL+NSEF FSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDN+MQNITGWSNYLVDDSDF YDTNQDFDDKNFI
Sbjct:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSAIARHLPKRTDNEVKNYWNTHLKKRLLDQGIDPLTHKPLASNPNPATPTTSEGQDDSNP-NLDEQSQSGSMSPKSLPISSSSCSLQKISNSDETPRNNGSLSSNKCRFKKSSSTSKLLNKVATKASSIGNMVSASMEGSLIRSTTFSPCLNDVFSETSQFQMDEFAPFSHSSDQHITDHMNEDINMDFDLSNSEFSFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNMMQNITGWSNYLVDDSDFSYDTNQDFDDKNFI 357

[Close]

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013715418.1 (transcription factor MYB29-like [Brassica napus] >XP_013715419.1 transcription factor MYB29-like [Brassica napus])

HSP 1 Score: 647 bits (1668), Expect = 3.350e-233
Identity = 328/358 (91.62%), Postives = 334/358 (93.30%), Query Frame = 0

Query:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLND---------MDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349
            MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLAS+PNPAT RTSEGQDDSNP NLDEQSQSGSMSPK LP SSSSCNLQ + NSDET RNNGSL     RFKK SSTSKLLNKVATKASSIGNM+SAS+EGSLIRST LSPCLND         MDEFDPFSHSSEQHITDHMKEDINMDFDL NSEFDFSQFIEQFSNIEAE+ANAIGGYNQDLLLSDVSSTSVDEDN+MQNITGWSNYLVDDSDFPYDTNQDFDDKNFI
Sbjct:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASSPNPATTRTSEGQDDSNPSNLDEQSQSGSMSPKYLPISSSSCNLQKMSNSDETTRNNGSLXXXXXRFKKSSSTSKLLNKVATKASSIGNMVSASVEGSLIRSTILSPCLNDVFSETSQFQMDEFDPFSHSSEQHITDHMKEDINMDFDLKNSEFDFSQFIEQFSNIEAEKANAIGGYNQDLLLSDVSSTSVDEDNIMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 358

[Close]

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_033138830.1 (transcription factor MYB29 [Brassica rapa] >RID42664.1 hypothetical protein BRARA_J02534 [Brassica rapa] >VDD20631.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 647 bits (1668), Expect = 4.030e-233
Identity = 328/358 (91.62%), Postives = 334/358 (93.30%), Query Frame = 0

Query:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLND---------MDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349
            MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLAS+PNPAT RTSEGQDDSNP NLDEQSQSGSMSPK LP SSSSCNLQ + NSDET RNNGSL     RFKK SSTSKLLNKVATKASSIGNM+SAS+EGSLIRST LSPCLND         MDEFDPFSHSSEQHITDHMKEDINMDFDL NSEFDFSQFIEQFSNIEAE+ANAIGGYNQDLLLSDVSSTSVDEDN+MQNITGWSNYLVDDSDFPYDTNQDFDDKNFI
Sbjct:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASSPNPATTRTSEGQDDSNPSNLDEQSQSGSMSPKYLPISSSSCNLQKMSNSDETTRNNGSLXXXXXRFKKSSSTSKLLNKVATKASSIGNMVSASVEGSLIRSTILSPCLNDVFSETSQFQMDEFDPFSHSSEQHITDHMKEDINMDFDLKNSEFDFSQFIEQFSNIEAEKANAIGGYNQDLLLSDVSSTSVDEDNIMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 358

[Close]

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Match: QBQ34143.1 (MYB transcription factor 29 [Isatis tinctoria])

HSP 1 Score: 583 bits (1502), Expect = 4.340e-208
Identity = 298/358 (83.24%), Postives = 319/358 (89.11%), Query Frame = 0

Query:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLND---------MDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349
            MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNE+KNYWNTHLKKRLIDQGIDPLTHKPLASNPNPA+PRTS+ QDDSNP N  EQSQSGSMSPKSLP SSSSCNLQ I NSDE PR  G        +KK SSTSKLLNKVAT+A+SIGNMLSASMEG+L+RSTTLSP LND         MDEFDPF+HSS+QH+ DHMKED  M+FDLNNS++DFSQF+E+FSN EAEEA  IGGYNQDLLLSDVSSTSVDED +M+N TGWSNYLVDDSDF Y+TNQ++DD NFI
Sbjct:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEIKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPASPRTSDFQDDSNPSN--EQSQSGSMSPKSLPLSSSSCNLQEISNSDEAPRTYG--------YKKSSSTSKLLNKVATRAASIGNMLSASMEGTLVRSTTLSPSLNDGFSEPSQFQMDEFDPFAHSSDQHVIDHMKEDFAMNFDLNNSDYDFSQFLEKFSNNEAEEAENIGGYNQDLLLSDVSSTSVDED-MMRNTTGWSNYLVDDSDFSYETNQNYDDNNFI 347

[Close]

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Match: CDY69794.1 (BnaCnng65380D, partial [Brassica napus])

HSP 1 Score: 563 bits (1452), Expect = 2.030e-201
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0

Query:   62 KPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLNDMDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349
            KPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLNDMDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI
Sbjct:    1 KPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLNDMDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 288

[Close]

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018444065.1 (PREDICTED: transcription factor MYB29-like [Raphanus sativus])

HSP 1 Score: 551 bits (1420), Expect = 5.340e-196
Identity = 286/314 (91.08%), Postives = 292/314 (92.99%), Query Frame = 0

Query:   45 GLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLND---------MDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349
            GLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWS IARHLPKRTDNEVKNYWNTHLKKRL+DQGIDPLTHKPLASNPNPATP TSEGQDDSNP NLDEQSQSGSMSPKSLP SSSSC+LQ I NSDETPRNNGSLSS KCRFKK SSTSKLLNKVATKASSIGNM+SASMEGSLIRSTT SPCLND         MDEF PFSHSS+QHITDHM EDINMDFDL+NSEF FSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDN+MQNITGWSNYLVDDSDF YDTNQDFDDKNFI
Sbjct:   10 GLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSAIARHLPKRTDNEVKNYWNTHLKKRLLDQGIDPLTHKPLASNPNPATPTTSEGQDDSNP-NLDEQSQSGSMSPKSLPISSSSCSLQKISNSDETPRNNGSLSSNKCRFKKSSSTSKLLNKVATKASSIGNMVSASMEGSLIRSTTFSPCLNDVFSETSQFQMDEFAPFSHSSDQHITDHMNEDINMDFDLSNSEFSFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNMMQNITGWSNYLVDDSDFSYDTNQDFDDKNFI 322

[Close]

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_006399250.1 (transcription factor MYB29 [Eutrema salsugineum] >ESQ40703.1 hypothetical protein EUTSA_v10013952mg [Eutrema salsugineum] >BAJ34421.1 unnamed protein product [Eutrema halophilum])

HSP 1 Score: 545 bits (1405), Expect = 3.440e-193
Identity = 285/358 (79.61%), Postives = 305/358 (85.20%), Query Frame = 0

Query:    1 MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPINLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKKLSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLND---------MDEFDPFSHSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYNQDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI 349
            MSRKPCCVGEGLKKGAWT EEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNE+KNYWNTHLKKRLIDQGIDP+THKPLASN +PAT +TSE QDD +  N D+QSQSGSMSPKSLP SSSSC               GSLSSKK RF++ SSTSKLLNKVAT+A+SIGN+LSASMEG+L+ STTLSPCL D         MDEFDPFS  SE H  DHMK+D  M+FDLN+SE+DFSQF+EQFSN E EEA  IGGYNQDLL+SDVSSTSVDEDN+M NITGWSNYLVD SDF YDTNQD D KNFI
Sbjct:    1 MSRKPCCVGEGLKKGAWTAEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEIKNYWNTHLKKRLIDQGIDPVTHKPLASNTSPATLKTSEFQDDDS--NRDDQSQSGSMSPKSLPPSSSSCXXXXXXXXXXXXXXXGSLSSKKRRFQRSSSTSKLLNKVATRAASIGNILSASMEGTLLSSTTLSPCLIDDFSETSQFHMDEFDPFSQPSE-HTIDHMKDDNGMNFDLNSSEYDFSQFLEQFSNNEGEEAENIGGYNQDLLMSDVSSTSVDEDNMMPNITGWSNYLVDYSDFVYDTNQDCDAKNFI 355

The following BLAST results are available for this feature:

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein

BLAST of C09p69770.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
VDD34399.1	7.720e-255	100.00	unnamed protein product [Brassica oleracea]	[more]
XP_013609260.1	1.790e-251	97.21	PREDICTED: LOW QUALITY PROTEIN: transcription fact...	[more]
KAF3564134.1	6.430e-247	95.81	hypothetical protein DY000_02019583 [Brassica cret...	[more]
XP_018443170.1	1.950e-234	92.18	PREDICTED: transcription factor MYB29 [Raphanus sa...	[more]
XP_013715418.1	3.350e-233	91.62	transcription factor MYB29-like [Brassica napus] >...	[more]
XP_033138830.1	4.030e-233	91.62	transcription factor MYB29 [Brassica rapa] >RID426...	[more]
QBQ34143.1	4.340e-208	83.24	MYB transcription factor 29 [Isatis tinctoria]	[more]
CDY69794.1	2.030e-201	100.00	BnaCnng65380D, partial [Brassica napus]	[more]
XP_018444065.1	5.340e-196	91.08	PREDICTED: transcription factor MYB29-like [Raphan...	[more]
XP_006399250.1	3.440e-193	79.61	transcription factor MYB29 [Eutrema salsugineum] >...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010438	cellular response to sulfur starvation
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0009819	drought recovery
biological_process	GO:0009682	induced systemic resistance
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0031930	mitochondria-nucleus signaling pathway
biological_process	GO:0010105	negative regulation of ethylene-activated signaling pathway
biological_process	GO:0010439	regulation of glucosinolate biosynthetic process
biological_process	GO:2000070	regulation of response to water deprivation
biological_process	GO:1905255	regulation of RNA binding transcription factor activity
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009625	response to insect
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0000976	transcription regulatory region sequence-specific DNA binding

InterPro

Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 e-value: 2.2E-13 score: 60.5 coord: 13..63 e-value: 5.5E-14 score: 62.5
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 2.7E-16 score: 59.5 coord: 67..112 e-value: 2.1E-12 score: 47.0
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 2.4332E-11 score: 56.0446
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 69..112 e-value: 2.43079E-10 score: 53.3482
None	No IPR available	GENE3D	1.10.10.60		coord: 11..67 e-value: 8.4E-19 score: 69.3
None	No IPR available	GENE3D	1.10.10.60		coord: 69..141 e-value: 2.6E-19 score: 71.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..172
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 1..348
None	No IPR available	PANTHER	PTHR10641:SF1192	TRANSCRIPTION FACTOR MYB29-RELATED	coord: 1..348
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..65 score: 23.985
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 66..116 score: 18.776
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C09_BnaDARv10	contig	C09_BnaDARv10:62652036..62654346 + View in Apollo

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on Darmor-bzh OGS10 v10	2021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR	2021-04-17
Blast2GO on Darmor-bzh OGS10 v10	2021-04-17
Darmor-bzh OGS10 v10	2020-07-22

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
C09p69770.1_BnaDARv10-RA	C09p69770.1_BnaDARv10-RA	Brassica napus	mRNA	C09_BnaDARv10 62652036..62654346 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>C09p69770.1_BnaDARv10-PA ID=C09p69770.1_BnaDARv10-PA|Name=C09p69770.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=350bp
MSRKPCCVGEGLKKGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCG
KSCRLRWANYLKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRT
DNEVKNYWNTHLKKRLIDQGIDPLTHKPLASNPNPATPRTSEGQDDSNPI
NLDEQSQSGSMSPKSLPHSSSSCNLQTIINSDETPRNNGSLSSKKCRFKK
LSSTSKLLNKVATKASSIGNMLSASMEGSLIRSTTLSPCLNDMDEFDPFS
HSSEQHITDHMKEDINMDFDLNNSEFDFSQFIEQFSNIEAEEANAIGGYN
QDLLLSDVSSTSVDEDNVMQNITGWSNYLVDDSDFPYDTNQDFDDKNFI.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

Vocabulary: **Biological Process**
Term	Definition
GO:2000070	regulation of response to water deprivation
GO:1905255	regulation of RNA binding transcription factor activity
GO:0050832	defense response to fungus
GO:0031930	mitochondria-nucleus signaling pathway
GO:0010439	regulation of glucosinolate biosynthetic process
GO:0010438	cellular response to sulfur starvation
GO:0010105	negative regulation of ethylene-activated signaling pathway
GO:0009867	jasmonic acid mediated signaling pathway
GO:0009819	drought recovery
GO:0009682	induced systemic resistance
GO:0009644	response to high light intensity
GO:0009625	response to insect
GO:0009611	response to wounding
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0003700	DNA-binding transcription factor activity
GO:0000976	transcription regulatory region sequence-specific DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Orthology

View orthology data for C09p69770.1_BnaDARv10-PA

Metabolic Model

View data from metabolic model for C09p69770.1_BnaDARv10-PA