C09p67150.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	C09p67150.1_BnaDARv10-RA
Unique Name	C09p67150.1_BnaDARv10-PA
Type	polypeptide
Organism	Brassica napus (cv. Darmor-bzh, rapeseed)
Sequence length	510

Homology

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BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013723248.1 (cyclin-dependent kinase C-1 [Brassica napus])

HSP 1 Score: 1015 bits (2625), Expect = 0.000e+0
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0

Query:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509
            MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ
Sbjct:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509

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BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013612601.1 (PREDICTED: cyclin-dependent kinase C-1 [Brassica oleracea var. oleracea])

HSP 1 Score: 1014 bits (2621), Expect = 0.000e+0
Identity = 508/509 (99.80%), Postives = 508/509 (99.80%), Query Frame = 0

Query:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509
            M VADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ
Sbjct:    1 MTVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509

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BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF3566384.1 (hypothetical protein DY000_02019359 [Brassica cretica])

HSP 1 Score: 1013 bits (2620), Expect = 0.000e+0
Identity = 508/509 (99.80%), Postives = 509/509 (100.00%), Query Frame = 0

Query:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509
            MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGP+GGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ
Sbjct:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPSGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509

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BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF3501049.1 (hypothetical protein F2Q69_00045108 [Brassica cretica])

HSP 1 Score: 1004 bits (2595), Expect = 0.000e+0
Identity = 505/509 (99.21%), Postives = 506/509 (99.41%), Query Frame = 0

Query:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509
            MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAA HWPAHPTNNAPPQVPAG SHHYYGKPRGPPGPNRYPPSGNQSRGY XXXXXXXXXXXXXXQGRGAPYAGGGPRGP+GGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ
Sbjct:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAALHWPAHPTNNAPPQVPAGSSHHYYGKPRGPPGPNRYPPSGNQSRGYXXXXXXXXXXXXXXXQGRGAPYAGGGPRGPSGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509

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BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009122072.1 (cyclin-dependent kinase C-1 [Brassica rapa] >XP_013668157.1 cyclin-dependent kinase C-1 [Brassica napus] >VDD20230.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 996 bits (2575), Expect = 0.000e+0
Identity = 499/509 (98.04%), Postives = 501/509 (98.43%), Query Frame = 0

Query:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509
            MAVAD GKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGV+KMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGY XXXXXXXXXXXX  QGRGA Y G GPRGP+GGAYGVGPPNYTQ GQHGGSGRGQNPMGGSRNQQYGWQQ
Sbjct:    1 MAVADDGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVSKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYXXXXXXXXXXXXXHQQGRGAHYVGVGPRGPSGGAYGVGPPNYTQSGQHGGSGRGQNPMGGSRNQQYGWQQ 509

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BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Match: RID42442.1 (hypothetical protein BRARA_J02325 [Brassica rapa])

HSP 1 Score: 994 bits (2569), Expect = 0.000e+0
Identity = 498/509 (97.84%), Postives = 500/509 (98.23%), Query Frame = 0

Query:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509
            MAVAD GKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGV+KMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGY XXXXXXXXXXXX  QGRGA Y G GPRGP+GGAYGVGPPNYTQ GQHG SGRGQNPMGGSRNQQYGWQQ
Sbjct:    1 MAVADDGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVSKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYXXXXXXXXXXXXXHQQGRGAHYVGVGPRGPSGGAYGVGPPNYTQSGQHGSSGRGQNPMGGSRNQQYGWQQ 509

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BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD34163.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 984 bits (2544), Expect = 0.000e+0
Identity = 508/563 (90.23%), Postives = 509/563 (90.41%), Query Frame = 0

Query:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKG------------------------SNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYR------------------------------PPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509
            MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKG                        SNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYR                              PPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGP+GGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ
Sbjct:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGEHLTNYIVDVRFVSFLLTLDLGAGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRYAFEVLYLCTMMFVNVSAVVTLLTYIYCGRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPSGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 563

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BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Match: AAZ67608.1 (80A08_23 [Brassica rapa subsp. pekinensis])

HSP 1 Score: 974 bits (2519), Expect = 0.000e+0
Identity = 499/543 (91.90%), Postives = 501/543 (92.27%), Query Frame = 0

Query:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIK----GSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYR------------------------------PPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509
            MAVAD GKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIK    GSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYR                              PPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGV+KMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGY XXXXXXXXXXXX  QGRGA Y G GPRGP+GGAYGVGPPNYTQ GQHGGSGRGQNPMGGSRNQQYGWQQ
Sbjct:    1 MAVADDGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKDPGAGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRYAFKVLHLCIMMFANVSAIVTLLTYIYCGRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVSKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYXXXXXXXXXXXXXHQQGRGAHYVGVGPRGPSGGAYGVGPPNYTQSGQHGGSGRGQNPMGGSRNQQYGWQQ 543

[Close]

BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018446745.1 (PREDICTED: cyclin-dependent kinase C-1 [Raphanus sativus])

HSP 1 Score: 913 bits (2359), Expect = 0.000e+0
Identity = 456/510 (89.41%), Postives = 461/510 (90.39%), Query Frame = 0

Query:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGG-AYGVGPPNYTQGGQHGGSGRGQNPMGGSRNQQYGWQQ 509
            M VAD GKLN+EE PPLWGSRSVDCFEKLEQIGEGTYGQV+MAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNE EQL+KIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKK                     QQHSRLPPLQHGGQSHAA PHWPAHPTNNAPPQVPAGPSHH+YGKPRGPPGPNRYPPSGNQSRGYN              QGRGAPY GGGPRGP+GG AYGVGPPNYT      GSGRGQN MGGSRNQQYGWQQ
Sbjct:    3 MVVADQGKLNLEEPPPLWGSRSVDCFEKLEQIGEGTYGQVFMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNETEQLNKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKXXXXXXXXXXXXXXXXXXXXQQQHSRLPPLQHGGQSHAA-PHWPAHPTNNAPPQVPAGPSHHFYGKPRGPPGPNRYPPSGNQSRGYNQSRGGYSSGSYHQ-QGRGAPYVGGGPRGPSGGGAYGVGPPNYTXXXXXXGSGRGQNTMGGSRNQQYGWQQ 510

[Close]

BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Match: AII30304.1 (cyclin-dependent kinase C-1 [Cardamine hirsuta])

HSP 1 Score: 880 bits (2275), Expect = 0.000e+0
Identity = 441/515 (85.63%), Postives = 467/515 (90.68%), Query Frame = 0

Query:    1 MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLTGLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQLSKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRHALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPA---HPTNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNXXXXXXXXXXXXXXQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSG---RGQNPMGGSRNQQYGWQQ 509
            MA A  G+LN+EE  P+WGSRSVDCFEKLEQIGEGTYGQVYMAK+IKTGEIVALKKIRMDNE+EGFPITAIREIKILKKLHHENV++L+EIVTSPGRD DDQG+PDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFT+PQIKCYM+QLLTGLHYCH +Q+LHRDIKGSNLLIDNEG LKLADFGLAR YS DH+GNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELL+AKPILPGKNE+EQL+KIFELCGSPDEN WPGV+KMPW+NNFKP+RPLKRRVREFF     FDRHALELL+KMLVLDPSQRI+AKDALDAEYFWTDPLPCDPKSLPTYE+SHEFQTKKKRQ+ RQ EEAAKRQKLQHP QQHSRLPPLQHGGQSHAA PHWPA   HPTNNAPPQV AGPSHHYYGKPRGPPGPNRYPPSGNQS GYN              QGRGAPYA G PRGP+GGAYGVGPPNYTQGGQ+GGSG   RGQN    SRNQQYGWQQ
Sbjct:    1 MAAAAFGQLNLEEPTPVWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIQLREIVTSPGRDRDDQGRPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSNDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLHAKPILPGKNEHEQLNKIFELCGSPDENIWPGVSKMPWYNNFKPARPLKRRVREFFRH---FDRHALELLEKMLVLDPSQRISAKDALDAEYFWTDPLPCDPKSLPTYESSHEFQTKKKRQQXRQNEEAAKRQKLQHPQQQHSRLPPLQHGGQSHAA-PHWPAGPNHPTNNAPPQVAAGPSHHYYGKPRGPPGPNRYPPSGNQSGGYNQSRGGYSSGSYPP-QGRGAPYAAG-PRGPSGGAYGVGPPNYTQGGQYGGSGGSGRGQN----SRNQQYGWQQ 505

The following BLAST results are available for this feature:

BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein

BLAST of C09p67150.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
XP_013723248.1	0.000e+0	100.00	cyclin-dependent kinase C-1 [Brassica napus]	[more]
XP_013612601.1	0.000e+0	99.80	PREDICTED: cyclin-dependent kinase C-1 [Brassica o...	[more]
KAF3566384.1	0.000e+0	99.80	hypothetical protein DY000_02019359 [Brassica cret...	[more]
KAF3501049.1	0.000e+0	99.21	hypothetical protein F2Q69_00045108 [Brassica cret...	[more]
XP_009122072.1	0.000e+0	98.04	cyclin-dependent kinase C-1 [Brassica rapa] >XP_01...	[more]
RID42442.1	0.000e+0	97.84	hypothetical protein BRARA_J02325 [Brassica rapa]	[more]
VDD34163.1	0.000e+0	90.23	unnamed protein product [Brassica oleracea]	[more]
AAZ67608.1	0.000e+0	91.90	80A08_23 [Brassica rapa subsp. pekinensis]	[more]
XP_018446745.1	0.000e+0	89.41	PREDICTED: cyclin-dependent kinase C-1 [Raphanus s...	[more]
AII30304.1	0.000e+0	85.63	cyclin-dependent kinase C-1 [Cardamine hirsuta]	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070816	phosphorylation of RNA polymerase II C-terminal domain
biological_process	GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter
biological_process	GO:0051726	regulation of cell cycle
biological_process	GO:0009615	response to virus
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004693	cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008353	RNA polymerase II carboxy-terminal domain kinase activity

InterPro

Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 347..367
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 123..368 e-value: 3.6E-77 score: 261.1
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 13..122 e-value: 5.9E-44 score: 150.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..370
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 434..455
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 434..509
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 483..509
None	No IPR available	PANTHER	PTHR24056:SF477	CYCLIN-DEPENDENT KINASE C-1	coord: 5..505
None	No IPR available	PANTHER	PTHR24056	CELL DIVISION PROTEIN KINASE	coord: 5..505
None	No IPR available	CDD	cd07840	STKc_CDK9_like	coord: 26..328 e-value: 0.0 score: 577.594
IPR000719	Protein kinase domain	SMART	SM00220	serkin_6	coord: 26..328 e-value: 5.2E-97 score: 338.3
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 26..328 e-value: 1.9E-73 score: 247.1
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 26..328 score: 45.319
IPR008271	Serine/threonine-protein kinase, active site	PROSITE	PS00108	PROTEIN_KINASE_ST	coord: 160..172
IPR017441	Protein kinase, ATP binding site	PROSITE	PS00107	PROTEIN_KINASE_ATP	coord: 32..55
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 19..336

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C09_BnaDARv10	contig	C09_BnaDARv10:61251702..61254476 + View in Apollo

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on Darmor-bzh OGS10 v10	2021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR	2021-04-17
Blast2GO on Darmor-bzh OGS10 v10	2021-04-17
Darmor-bzh OGS10 v10	2020-07-22

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
C09p67150.1_BnaDARv10-RA	C09p67150.1_BnaDARv10-RA	Brassica napus	mRNA	C09_BnaDARv10 61251660..61254688 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>C09p67150.1_BnaDARv10-PA ID=C09p67150.1_BnaDARv10-PA|Name=C09p67150.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=510bp
MAVADAGKLNIEEHPPLWGSRSVDCFEKLEQIGEGTYGQVYMAKDIKTGE
IVALKKIRMDNEKEGFPITAIREIKILKKLHHENVVELKEIVTSPGRDTD
DQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMRQLLT
GLHYCHAHQILHRDIKGSNLLIDNEGQLKLADFGLARMYSQDHSGNLTNR
VITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLYAKPILPGKNENEQL
SKIFELCGSPDENNWPGVTKMPWFNNFKPSRPLKRRVREFFGQYQVFDRH
ALELLDKMLVLDPSQRITAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQ
TKKKRQEQRQREEAAKRQKLQHPHQQHSRLPPLQHGGQSHAAAPHWPAHP
TNNAPPQVPAGPSHHYYGKPRGPPGPNRYPPSGNQSRGYNQSRGGYSSSG
SYHQQGRGAPYAGGGPRGPNGGAYGVGPPNYTQGGQHGGSGRGQNPMGGS
RNQQYGWQQ.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf
IPR017441	Protein_kinase_ATP_BS
IPR008271	Ser/Thr_kinase_AS
IPR000719	Prot_kinase_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0051726	regulation of cell cycle
GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter
GO:0009615	response to virus
GO:0070816	phosphorylation of RNA polymerase II C-terminal domain

Vocabulary: **Cellular Component**
Term	Definition
GO:0005829	cytosol
GO:0016021	integral component of membrane
GO:0005634	nucleus
GO:0000307	cyclin-dependent protein kinase holoenzyme complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005524	ATP binding
GO:0004693	cyclin-dependent protein serine/threonine kinase activity
GO:0008353	RNA polymerase II carboxy-terminal domain kinase activity

Orthology

View orthology data for C09p67150.1_BnaDARv10-PA

Metabolic Model

View data from metabolic model for C09p67150.1_BnaDARv10-PA