C09p67050.1_BnaDARv10-PA (polypeptide) Brassica napus
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013612476.1 (PREDICTED: 40S ribosomal protein S6-2 [Brassica oleracea var. oleracea] >XP_013701999.1 40S ribosomal protein S6-2 [Brassica napus]) HSP 1 Score: 477 bits (1227), Expect = 1.740e-169 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0 Query: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009122062.2 (40S ribosomal protein S6-2 [Brassica rapa] >XP_013668152.1 40S ribosomal protein S6-2 [Brassica napus] >RID42435.1 hypothetical protein BRARA_J02318 [Brassica rapa]) HSP 1 Score: 475 bits (1223), Expect = 7.080e-169 Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0 Query: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTK+DDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKEDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009131151.2 (40S ribosomal protein S6-2 [Brassica rapa] >XP_013680281.1 40S ribosomal protein S6-2 [Brassica napus] >XP_013726602.1 40S ribosomal protein S6-2 [Brassica napus] >XP_013726609.1 40S ribosomal protein S6-2 [Brassica napus] >AAZ66937.1 117M18_18 [Brassica rapa] >RID68243.1 hypothetical protein BRARA_C00414 [Brassica rapa]) HSP 1 Score: 474 bits (1219), Expect = 2.880e-168 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0 Query: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGY+FKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNL KDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLGKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018449973.1 (PREDICTED: 40S ribosomal protein S6-2 [Raphanus sativus] >XP_018470659.1 PREDICTED: 40S ribosomal protein S6-2 [Raphanus sativus]) HSP 1 Score: 474 bits (1219), Expect = 2.880e-168 Identity = 246/249 (98.80%), Postives = 249/249 (100.00%), Query Frame = 0 Query: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGY+FKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAN+DAA+YQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAAEYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018445626.1 (PREDICTED: 40S ribosomal protein S6-2 isoform X1 [Raphanus sativus] >XP_018445627.1 PREDICTED: 40S ribosomal protein S6-2 isoform X2 [Raphanus sativus] >XP_018445629.1 PREDICTED: 40S ribosomal protein S6-2 isoform X3 [Raphanus sativus]) HSP 1 Score: 473 bits (1218), Expect = 4.090e-168 Identity = 245/249 (98.39%), Postives = 249/249 (100.00%), Query Frame = 0 Query: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGY+FKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAN+DAA+YQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKP+AA
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAAEYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPIAA 249
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD34155.1 (unnamed protein product, partial [Brassica oleracea]) HSP 1 Score: 473 bits (1218), Expect = 4.400e-168 Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0 Query: 2 KFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
+FNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA
Sbjct: 4 QFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 251
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018472776.1 (PREDICTED: 40S ribosomal protein S6-1-like [Raphanus sativus]) HSP 1 Score: 473 bits (1216), Expect = 8.260e-168 Identity = 245/248 (98.79%), Postives = 248/248 (100.00%), Query Frame = 0 Query: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVA 248
MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGY+FKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAN+DAA+YQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVA
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAAEYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVA 248
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009125304.2 (40S ribosomal protein S6-2 [Brassica rapa] >XP_013615362.1 PREDICTED: 40S ribosomal protein S6-2 isoform X1 [Brassica oleracea var. oleracea] >XP_013615370.1 PREDICTED: 40S ribosomal protein S6-2 isoform X2 [Brassica oleracea var. oleracea] >XP_013622336.1 PREDICTED: 40S ribosomal protein S6-2 [Brassica oleracea var. oleracea] >XP_013678740.1 40S ribosomal protein S6-2 [Brassica napus] >KAF3511399.1 hypothetical protein F2Q69_00000406 [Brassica cretica] >KAF3541297.1 hypothetical protein F2Q69_00018655 [Brassica cretica]) HSP 1 Score: 472 bits (1215), Expect = 1.170e-167 Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0 Query: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGY+FKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNL KDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAA+YQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLGKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAAEYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD20217.1 (unnamed protein product, partial [Brassica rapa]) HSP 1 Score: 472 bits (1214), Expect = 1.790e-167 Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0 Query: 2 KFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
+FNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTK+DDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA
Sbjct: 4 QFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKEDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 251
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Match: VDC78575.1 (unnamed protein product, partial [Brassica rapa]) HSP 1 Score: 470 bits (1210), Expect = 7.850e-167 Identity = 245/248 (98.79%), Postives = 247/248 (99.60%), Query Frame = 0 Query: 2 KFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLTKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249
+FNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGY+FKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNL KDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA
Sbjct: 6 QFNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKDLPGLTDTEKPRMRGPKRASKIRKLFNLGKDDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 253 The following BLAST results are available for this feature:
BLAST of C09p67050.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR) Total hits: 20
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >C09p67050.1_BnaDARv10-PA ID=C09p67050.1_BnaDARv10-PA|Name=C09p67050.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=250bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Metabolic Model
View data from metabolic model for C09p67050.1_BnaDARv10-PA
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