C09p66600.1_BnaDARv10-PA (polypeptide) Brassica napus
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD34120.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 426 bits (1095), Expect = 3.370e-150 Identity = 219/225 (97.33%), Postives = 219/225 (97.33%), Query Frame = 0 Query: 1 MKTILKIRAKYGLPLDGKKIAEVQKGFG--HAAASSGNPHHQVIFPCLFHVMFLVGTTMSYSLSNGINLICGDNLIVAFEMRLYSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGDKDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFWLELYSHDRSLFPSLNDPVDAEFSLGSDVLL 223
MKTILKIRAKYGLPLDGKKIAEVQKG HAAASSGNPHHQVIFPCLFHVMFLVGTTMSYSLSNGIN ICGDNLIVAFEMRLYSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGDKD DVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFWLELYSHDRSLFPSLNDPVDAEFSLGSDVLL
Sbjct: 1 MKTILKIRAKYGLPLDGKKIAEVQKGLNREHAAASSGNPHHQVIFPCLFHVMFLVGTTMSYSLSNGINFICGDNLIVAFEMRLYSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGDKDADVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFWLELYSHDRSLFPSLNDPVDAEFSLGSDVLL 225
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF2572498.1 (hypothetical protein F2Q70_00005819 [Brassica cretica]) HSP 1 Score: 199 bits (506), Expect = 7.980e-60 Identity = 125/208 (60.10%), Postives = 131/208 (62.98%), Query Frame = 0 Query: 1 MKTILKIRAKYGLPLDGKKIAEVQK----------------------GFG------HAAASSGNPHHQVIFPCLFHVMFLVGTTMSYSLSNGINLICGDNLIVAFEMRLYSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGDKDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRD 180
MKTILKIRAKYGLPLDGKKIAEVQK G G HAAASSGNPHHQ + + R YSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGDKD DVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRT L T ++ S +S +D
Sbjct: 79 MKTILKIRAKYGLPLDGKKIAEVQKSLVSCHRCFIYLGDLARYKGLYGEGDSKNREHAAASSGNPHHQWL---------------------------------SVIERSYSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGDKDADVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTRLVTL--LIFSVDNSKKD 251
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Match: ALL27073.1 (C9.SMG7b [Brassica napus]) HSP 1 Score: 192 bits (487), Expect = 3.160e-59 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 Query: 97 RIVPNLFTAPKDSSRRPTGKRRGKGGDKDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFW 193
RIVPNLFTAPKDSSRRPTGKRRGKGGDKDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFW
Sbjct: 22 RIVPNLFTAPKDSSRRPTGKRRGKGGDKDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFW 118
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013708631.1 (protein SMG7-like [Brassica napus] >XP_013708632.1 protein SMG7-like [Brassica napus] >XP_013708954.1 protein SMG7-like [Brassica napus] >XP_013708955.1 protein SMG7-like [Brassica napus] >XP_022555583.1 protein SMG7-like [Brassica napus] >ALL27074.1 C9.SMG7c [Brassica napus]) HSP 1 Score: 189 bits (481), Expect = 2.570e-58 Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0 Query: 97 RIVPNLFTAPKDSSRRPTGKRRGKGGDKDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFW 193
RIVPNLFTAPKDSSRRPTGKRRGKGGDKD DVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFW
Sbjct: 22 RIVPNLFTAPKDSSRRPTGKRRGKGGDKDADVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFW 118
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018443950.1 (PREDICTED: protein SMG7 [Raphanus sativus] >XP_018443951.1 PREDICTED: protein SMG7 [Raphanus sativus]) HSP 1 Score: 178 bits (451), Expect = 1.730e-47 Identity = 133/264 (50.38%), Postives = 146/264 (55.30%), Query Frame = 0 Query: 2 KTILKIRAKYGLPL------------DGKKIAEVQKG--------------------FG--------HAAASS------------GNPHHQVIFPCLFHVMFLVGTTMSYSLSNGINL---ICGDNLIVAFEMRLYSHFLSTNTSLSLLSRIVPNLFTAPK--DSSRRPTGKRRGKGGD----KDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFWLELYSHDRSLF 204
+ ILKIRAKYGLPL DGKKIAEVQKG +G HAAASS GNPHHQ+ + T Y S + DNLIVAFE S+ LFTAPK DSSRRPTGKRRGKGGD K+ DV AVPEKDKVTSADEMLKAFC++FVRLNGILFTRTSLETFSDVL STSSSLRDLI SSL E+MIF + + D +LF
Sbjct: 134 EMILKIRAKYGLPLGYFQDSQNLADKDGKKIAEVQKGLVSCHRCLIYLGDLARYKGLYGEGDSKNREHAAASSYYLQAASLLPGSGNPHHQLAIIASYSGDEFAAT-YRYFRSLAVETPFPTARDNLIVAFEKNRQSY---------------AQLFTAPKAKDSSRRPTGKRRGKGGDISSKKEADVAAVPEKDKVTSADEMLKAFCIRFVRLNGILFTRTSLETFSDVLASTSSSLRDLISSSLKEEMIFGKD--TSDSALF 379
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009120890.1 (protein SMG7 [Brassica rapa] >XP_013667369.1 protein SMG7-like [Brassica napus]) HSP 1 Score: 168 bits (425), Expect = 5.630e-44 Identity = 127/265 (47.92%), Postives = 139/265 (52.45%), Query Frame = 0 Query: 2 KTILKIRAKYGLPL---------------DGKKIAEVQKG--------------------FG--------HAAASS------------GNPHHQVIFPCLFHVMFLVGTTMSYSLSNGINL---ICGDNLIVAFEMRLYSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGD----KDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFWLELYSHDRSLF 204
+ ILKIR+KYGLPL DGKK AEVQKG +G HAAASS GNPHHQ+ + T Y S + DNLIVAFE S+ LF APKDS RRPTGKRRGKG D KD DVVA PEKDK TSADE LKAFCV+FVRLNGILFTRTSLETFSDVL STSSSLRDLI SSL E+M F + + D +LF
Sbjct: 132 EMILKIRSKYGLPLGYFSESQDSQNLADKDGKKFAEVQKGLVSCHRCLIYLGDLARYKGLYGEGDSKNREHAAASSYYLQAASLLPGSGNPHHQLAIIASYSGDEFAAT-YRYFRSLAVETPFPTARDNLIVAFEKNRLSY---------------AQLFAAPKDSPRRPTGKRRGKGQDNSSKKDADVVAAPEKDKATSADEKLKAFCVRFVRLNGILFTRTSLETFSDVLASTSSSLRDLISSSLKEEMSFGKD--TSDSALF 378
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF2572500.1 (hypothetical protein F2Q70_00005817 [Brassica cretica]) HSP 1 Score: 167 bits (422), Expect = 1.460e-43 Identity = 126/265 (47.55%), Postives = 140/265 (52.83%), Query Frame = 0 Query: 2 KTILKIRAKYGLPL---------------DGKKIAEVQKG--------------------FG--------HAAASS------------GNPHHQVIFPCLFHVMFLVGTTMSYSLSNGINL---ICGDNLIVAFEMRLYSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGD----KDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFWLELYSHDRSLF 204
+ ILKIR+KYGLPL DGKK AEVQKG +G HAAASS GNPHHQ+ + T Y S + DNLIVAFE S+ LF APKDS RRPTGKRRGKG D KD DVVAVPEKDK TSADE LK+FCV+FVRLNGILFTRTSLETFSDVL STSSSL+DLI SSL E+M F + + D +LF
Sbjct: 375 EMILKIRSKYGLPLGYFSENQDSQNLADKDGKKFAEVQKGLVSCHRCLIYLGDLARYKGLYGEGDSKSREHAAASSYYLQAASLLPGSGNPHHQLAIIASYSGDEFAAT-YRYFRSLAVETPFPTARDNLIVAFEKNRLSY---------------AQLFAAPKDSPRRPTGKRRGKGQDISSKKDADVVAVPEKDKATSADEKLKSFCVRFVRLNGILFTRTSLETFSDVLASTSSSLQDLISSSLKEEMSFGKD--TSDSALF 621
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF2538621.1 (hypothetical protein F2Q68_00022357 [Brassica cretica]) HSP 1 Score: 167 bits (422), Expect = 1.560e-43 Identity = 126/265 (47.55%), Postives = 140/265 (52.83%), Query Frame = 0 Query: 2 KTILKIRAKYGLPL---------------DGKKIAEVQKG--------------------FG--------HAAASS------------GNPHHQVIFPCLFHVMFLVGTTMSYSLSNGINL---ICGDNLIVAFEMRLYSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGD----KDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFWLELYSHDRSLF 204
+ ILKIR+KYGLPL DGKK AEVQKG +G HAAASS GNPHHQ+ + T Y S + DNLIVAFE S+ LF APKDS RRPTGKRRGKG D KD DVVAVPEKDK TSADE LK+FCV+FVRLNGILFTRTSLETFSDVL STSSSL+DLI SSL E+M F + + D +LF
Sbjct: 828 EMILKIRSKYGLPLGYFSENQDSQNLADKDGKKFAEVQKGLVSCHRCLIYLGDLARYKGLYGEGDSKSREHAAASSYYLQAASLLPGSGNPHHQLAIIASYSGDEFAAT-YRYFRSLAVETPFPTARDNLIVAFEKNRLSY---------------AQLFAAPKDSPRRPTGKRRGKGQDISSKKDADVVAVPEKDKATSADEKLKSFCVRFVRLNGILFTRTSLETFSDVLASTSSSLQDLISSSLKEEMSFGKD--TSDSALF 1074
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Match: RID41711.1 (hypothetical protein BRARA_J01646 [Brassica rapa]) HSP 1 Score: 166 bits (421), Expect = 1.930e-43 Identity = 126/265 (47.55%), Postives = 139/265 (52.45%), Query Frame = 0 Query: 2 KTILKIRAKYGLPL---------------DGKKIAEVQKG--------------------FG--------HAAASS------------GNPHHQVIFPCLFHVMFLVGTTMSYSLSNGINL---ICGDNLIVAFEMRLYSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGD----KDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFWLELYSHDRSLF 204
+ ILKIR+KYGLPL DGKK AEVQKG +G HAAASS GNPHHQ+ + T Y S + DNLIVAFE S+ LF APK+S RRPTGKRRGKG D KD DVVA PEKDK TSADE LKAFCV+FVRLNGILFTRTSLETFSDVL STSSSLRDLI SSL E+M F + + D +LF
Sbjct: 132 EMILKIRSKYGLPLGYFSENQDSQNLADKDGKKFAEVQKGLVSCHRCLIYLGDLARYKGLYGEGDSKNREHAAASSYYLQAASLLPGSGNPHHQLAIIASYSGDEFAAT-YRYFRSLAVETPFPTARDNLIVAFEKNRLSY---------------AQLFAAPKESPRRPTGKRRGKGQDNSSKKDADVVAAPEKDKATSADEKLKAFCVRFVRLNGILFTRTSLETFSDVLASTSSSLRDLISSSLKEEMSFGKD--TSDSALF 378
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD18861.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 166 bits (421), Expect = 1.950e-43 Identity = 126/265 (47.55%), Postives = 139/265 (52.45%), Query Frame = 0 Query: 2 KTILKIRAKYGLPL---------------DGKKIAEVQKG--------------------FG--------HAAASS------------GNPHHQVIFPCLFHVMFLVGTTMSYSLSNGINL---ICGDNLIVAFEMRLYSHFLSTNTSLSLLSRIVPNLFTAPKDSSRRPTGKRRGKGGD----KDEDVVAVPEKDKVTSADEMLKAFCVKFVRLNGILFTRTSLETFSDVLGSTSSSLRDLIWSSLTEDMIFWLELYSHDRSLF 204
+ ILKIR+KYGLPL DGKK AEVQKG +G HAAASS GNPHHQ+ + T Y S + DNLIVAFE S+ LF APK+S RRPTGKRRGKG D KD DVVA PEKDK TSADE LKAFCV+FVRLNGILFTRTSLETFSDVL STSSSLRDLI SSL E+M F + + D +LF
Sbjct: 132 ERILKIRSKYGLPLGYFSENQDSQNLADKDGKKFAEVQKGLVSCHRCLIYLGDLARYKGLYGEGDSKNREHAAASSYYLQAASLLPGSGNPHHQLAIIASYSGDEFAAT-YRYFRSLAVETPFPTARDNLIVAFEKNRLSY---------------AQLFAAPKESPRRPTGKRRGKGQDNSSKKDADVVAAPEKDKATSADEKLKAFCVRFVRLNGILFTRTSLETFSDVLASTSSSLRDLISSSLKEEMSFGKD--TSDSALF 378 The following BLAST results are available for this feature:
BLAST of C09p66600.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR) Total hits: 20
Pagesback to topInterPro
Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >C09p66600.1_BnaDARv10-PA ID=C09p66600.1_BnaDARv10-PA|Name=C09p66600.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=224bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Metabolic Model
View data from metabolic model for C09p66600.1_BnaDARv10-PA
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