C09p65860.1_BnaDARv10-PA (polypeptide) Brassica napus
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013610552.1 (PREDICTED: auxin-responsive protein SAUR22 [Brassica oleracea var. oleracea] >VDD34085.1 unnamed protein product [Brassica oleracea]) HSP 1 Score: 302 bits (774), Expect = 9.220e-104 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 Query: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW
Sbjct: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009122007.1 (auxin-responsive protein SAUR50 [Brassica rapa] >XP_013666115.1 auxin-responsive protein SAUR50 [Brassica napus] >VDD20121.1 unnamed protein product [Brassica rapa]) HSP 1 Score: 300 bits (768), Expect = 7.580e-103 Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0 Query: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKK RHGGSRSKLDLLIESRPLLHGVSDKANIW
Sbjct: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKTRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Match: RID42381.1 (hypothetical protein BRARA_J02266 [Brassica rapa]) HSP 1 Score: 298 bits (762), Expect = 6.240e-102 Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0 Query: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKK RHGGSRSKLDLLIESRPLLHGVSDKA IW
Sbjct: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKTRHGGSRSKLDLLIESRPLLHGVSDKATIW 148
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018444452.1 (PREDICTED: auxin-responsive protein SAUR72-like [Raphanus sativus]) HSP 1 Score: 286 bits (731), Expect = 3.340e-97 Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 0 Query: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
MAGGI KCSKIRHIVKLRQMLRQWR+KARMSSARRCVPSDVPSG+VAVYVGSS RRFVVR THLNHPVL+NLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNR GGSRSKLDLLIESRPLLHGVSDKA IW
Sbjct: 1 MAGGIGKCSKIRHIVKLRQMLRQWRSKARMSSARRCVPSDVPSGHVAVYVGSSCRRFVVRTTHLNHPVLRNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRQGGSRSKLDLLIESRPLLHGVSDKATIW 148
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_022564757.1 (auxin-responsive protein SAUR50-like [Brassica napus]) HSP 1 Score: 277 bits (709), Expect = 9.600e-94 Identity = 142/155 (91.61%), Postives = 142/155 (91.61%), Query Frame = 0 Query: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKA---RMSSARRC----VPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
MAGGIAKCSKIRHIVKLRQMLRQWRNKA R S C VPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKK RHGGSRSKLDLLIESRPLLHGVSDKANIW
Sbjct: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKALPFRYSLTCSCFSLPVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKTRHGGSRSKLDLLIESRPLLHGVSDKANIW 155
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_006399598.1 (auxin-responsive protein SAUR50 [Eutrema salsugineum] >ESQ41051.1 hypothetical protein EUTSA_v10015745mg [Eutrema salsugineum]) HSP 1 Score: 264 bits (675), Expect = 1.160e-88 Identity = 131/148 (88.51%), Postives = 137/148 (92.57%), Query Frame = 0 Query: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
MAGG+AKCSKIRHIV+LRQMLRQWRNKARMSS RR VPSDVPSG+VAVYVGSS RRFVVRA+HLNHPV NLLVKAEEEFGFANHGPLVIPCEESVFEESIRLI RS R CTDDLKK+RHGG RSKLDLLIESRPLLHGVS+KA IW
Sbjct: 1 MAGGVAKCSKIRHIVRLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGSSCRRFVVRASHLNHPVFTNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLITRSGRLTCTDDLKKSRHGGIRSKLDLLIESRPLLHGVSEKAIIW 148
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013619671.1 (PREDICTED: auxin-responsive protein SAUR22-like [Brassica oleracea var. oleracea]) HSP 1 Score: 260 bits (665), Expect = 3.870e-87 Identity = 127/148 (85.81%), Postives = 135/148 (91.22%), Query Frame = 0 Query: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
MAG I KCSKIRHIVKLRQMLRQWR+KAR+SS RRCVPSDVPSGYVAV+VGSS RRFVVRATHLNHP++++LL KAEEEFGFANHGPLVIPCEESVFEESIRLI RSCRF CTD LKKNRHGG+RSKLD LIESRPLLH VS K IW
Sbjct: 1 MAGVIGKCSKIRHIVKLRQMLRQWRSKARISSVRRCVPSDVPSGYVAVHVGSSCRRFVVRATHLNHPIIRSLLAKAEEEFGFANHGPLVIPCEESVFEESIRLITRSCRFTCTDGLKKNRHGGNRSKLDRLIESRPLLHDVSKKTIIW 148
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_006286600.1 (auxin-responsive protein SAUR50 [Capsella rubella] >EOA19498.1 hypothetical protein CARUB_v10002201mg [Capsella rubella]) HSP 1 Score: 259 bits (663), Expect = 8.070e-87 Identity = 130/149 (87.25%), Postives = 137/149 (91.95%), Query Frame = 0 Query: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLI-ESRPLLHGVSDKANIW 148
MAGGI KCSKIRHIVKLRQMLRQWR+KARMSS RRCVPSDVPSG+VAVYVGSS RRFVVRAT+LNHP+L NLL KAEEEFGFA+ GPLVIPCEESVFEESIR INRS RF CTDDLKK+RHGG RSKLDLL+ ESRPLLHGVSDKA IW
Sbjct: 1 MAGGIGKCSKIRHIVKLRQMLRQWRSKARMSSVRRCVPSDVPSGHVAVYVGSSCRRFVVRATYLNHPILANLLAKAEEEFGFASQGPLVIPCEESVFEESIRFINRSSRFTCTDDLKKSRHGGIRSKLDLLMMESRPLLHGVSDKAIIW 149
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Match: NP_196660.1 (SAUR-like auxin-responsive protein family [Arabidopsis thaliana] >ABD57511.1 At5g10990 [Arabidopsis thaliana] >AED91618.1 SAUR-like auxin-responsive protein family [Arabidopsis thaliana] >OAO91462.1 hypothetical protein AXX17_AT5G10670 [Arabidopsis thaliana] >CAA0401913.1 unnamed protein product [Arabidopsis thaliana] >CAB96854.1 putative protein [Arabidopsis thaliana]) HSP 1 Score: 259 bits (662), Expect = 1.110e-86 Identity = 129/148 (87.16%), Postives = 134/148 (90.54%), Query Frame = 0 Query: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
MAGGI KCSKIRHIVKLRQMLRQWRNKARMSS RR VPSDVPSG+VAVYVG S RRFVV AT+LNHP+L NLLVKAEEEFGFAN GPLVIPCEESVFEESIR I RS RF CTDDLKKNRHGG RSKLDLL+ESRPLLHGVS+KA IW
Sbjct: 1 MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVLATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITRSSRFTCTDDLKKNRHGGIRSKLDLLMESRPLLHGVSEKAIIW 148
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Match: RID73224.1 (hypothetical protein BRARA_B00388 [Brassica rapa] >VDC84979.1 unnamed protein product [Brassica rapa]) HSP 1 Score: 258 bits (658), Expect = 4.520e-86 Identity = 125/148 (84.46%), Postives = 134/148 (90.54%), Query Frame = 0 Query: 1 MAGGIAKCSKIRHIVKLRQMLRQWRNKARMSSARRCVPSDVPSGYVAVYVGSSRRRFVVRATHLNHPVLKNLLVKAEEEFGFANHGPLVIPCEESVFEESIRLINRSCRFNCTDDLKKNRHGGSRSKLDLLIESRPLLHGVSDKANIW 148
MAGGI KCSKIRHIVKLRQMLRQWR+KAR SS RRCVPSDVPSGYVAV+VGSS RRFVV ATHLNHP++++LL KAEEEFGFANHGPLVIPC+ESVFEESIRLI RSCRF CTDDLKKNR GG+RSKLD +IESRPLLH VS K IW
Sbjct: 1 MAGGIGKCSKIRHIVKLRQMLRQWRSKARSSSVRRCVPSDVPSGYVAVHVGSSCRRFVVCATHLNHPIIRSLLAKAEEEFGFANHGPLVIPCDESVFEESIRLITRSCRFTCTDDLKKNRRGGTRSKLDRMIESRPLLHDVSTKTIIW 148 The following BLAST results are available for this feature:
BLAST of C09p65860.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR) Total hits: 20
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >C09p65860.1_BnaDARv10-PA ID=C09p65860.1_BnaDARv10-PA|Name=C09p65860.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=149bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Metabolic Model
View data from metabolic model for C09p65860.1_BnaDARv10-PA
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