Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1581 |
| Exons | 1 |
| Cds size | 1581 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p12230.1_BnaDARv10 | A01p12230.1_BnaDARv10 | Brassica napus | gene | A01_BnaDARv10 6202761..6204341 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1626340563.4853423-CDS-A01_BnaDARv10:6202760..6204341 | 1626340563.4853423-CDS-A01_BnaDARv10:6202760..6204341 | Brassica napus | CDS | A01_BnaDARv10 6202761..6204341 + |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p12230.1_BnaDARv10_exon1 | A01p12230.1_BnaDARv10_exon1 | Brassica napus | exon | A01_BnaDARv10 6202761..6204341 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >A01p12230.1_BnaDARv10-RA ID=A01p12230.1_BnaDARv10-RA|Name=A01p12230.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=1581bp|location=Sequence derived from alignment at A01_BnaDARv10:6202761..6204341+ (Brassica napus)|Notes=Excludes all bases but those of type(s): exon.
ATGAAAGTAGTTTTCGTTATGTTTCTTGCTATGCTTGTTTCAGTTTCATC
ACAAGCAGTAGTACAGAAACCAAATATAGGAAACTTCCTCCAATGCCTTC
GTGATTGGAGCGATCCGAAGAATCCCATCACAAAAGCCATCTTCACTCCC
CAAAACTCAACCTTCACCTCGTCTTACGTGTCATACACGAAAAACAAAAG
ATACTCAAACCCTAACGACACAAACCTAATAGCCATCGTTGAGGCAAAAC
ATGAATCCCATGTTCAGACAACTGTGGTCTGCGCTAAGTCCAACCGAGTC
CAGATCCGTATCCGAAGCGGCGGTCACGACTACGAAGGCCTTTCATACAC
CTCTTCCCTGCCGTTTGCAGTTCTCGATATGAACAATCTAAGGTCTATTA
CCATTGACGTGTCCGGCAAGAAAGCTTGGGTTCAAGCTGGTGCAACCCTA
GGAGAGCTCTACACAAAAATCTCTGAAGCGAGTAAAACGTTAGCGTTTCC
GGCTGGCGTTTGCCCCACTCTAGGAGCCGGAGGACACATCAGCGGCGGAG
GGTACGGAAACCTAATGAGAAAATACGGAATCTCTGTGGATCATGTCGTC
GATGCTCAGTTAGTTGATGTCAACGGCAAGATCTTGAACCGTGCCTCCAT
GGGAGAAGATTTGTTTTGGGCTATTCGCGGCGGTGGTGGCGCCAGCTTCG
GCGTTATCCTCTCGTGGACCATCAACCTAGTTGAAGTCCCAGAGACTATA
ACAGTTTTTAACGTTAACAAAACGTTAGGACAAGGAGCTACCGATGTTCT
GTACAAATGGCAGCTTGTCTCTAGCAAGTTGCCTAGAGAGCTTTTCTTGA
GAGCAATGCCTCAAATCACAAAAGGAGCGAATAAAACCATCGCGGTTAAG
TTCATCGCTCAGTTCTTAGGCTCATCAAAGAAGCTCATGGAGATTATAAA
CAAGAACTTACCTGAACTAGGGCTAAAAGGCGAAGATTGCTACGAAATGA
GCTGGCTTAATACGACGACGTTTTGGGCGGACTACCCGGTCGGGACATCG
ACAAGTGTTCTTCTGAAAAGGCCATCTACTCCGCCAGGAGCGTTCTTCAA
AAGCAAATCAGATTACGTCAAGAAACCGATCCCTAAAGAAGGTATGGAGA
AGATGTGGAAAACAATGTTGAAGTTCAACAACCATGTGTTTATGCAATGG
AACCCTTACGGTGGAGTGATGGACAAGATTGCGGCGAATGCAACCGCGTT
TCCTCACAGGAAAGGAAACTTGTTCAAGATTCAGTATTTTGCGTTATGGA
TAGACGCAAACGCCACAAAAGCTAACCTAGCTTTGATGAAAGAACTTTAT
GATGTGGCTGAGACGTACGTGTCAAGCAACCCGAGAGAGGCGTTTTTGAA
TTATAGAGACATTGATGTTGGAAGCAATCCTAGTGGTATGACAAATGTTG
CTAAAGGTAAGGTCTATGGATCCAAGTATTTCGTAGGGAACTTGAACAGA
TTGATGAATGTTAAAGCTAAGTATGATCCTGTTAATTTCTTTAGGCATGA
GCAGAGTATTCCTCCTCTTCGTGCAATGTAA back to topprotein sequence of A01p12230.1_BnaDARv10-RA >A01p12230.1_BnaDARv10-PA ID=A01p12230.1_BnaDARv10-PA|Name=A01p12230.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=527bp
MKVVFVMFLAMLVSVSSQAVVQKPNIGNFLQCLRDWSDPKNPITKAIFTP
QNSTFTSSYVSYTKNKRYSNPNDTNLIAIVEAKHESHVQTTVVCAKSNRV
QIRIRSGGHDYEGLSYTSSLPFAVLDMNNLRSITIDVSGKKAWVQAGATL
GELYTKISEASKTLAFPAGVCPTLGAGGHISGGGYGNLMRKYGISVDHVV
DAQLVDVNGKILNRASMGEDLFWAIRGGGGASFGVILSWTINLVEVPETI
TVFNVNKTLGQGATDVLYKWQLVSSKLPRELFLRAMPQITKGANKTIAVK
FIAQFLGSSKKLMEIINKNLPELGLKGEDCYEMSWLNTTTFWADYPVGTS
TSVLLKRPSTPPGAFFKSKSDYVKKPIPKEGMEKMWKTMLKFNNHVFMQW
NPYGGVMDKIAANATAFPHRKGNLFKIQYFALWIDANATKANLALMKELY
DVAETYVSSNPREAFLNYRDIDVGSNPSGMTNVAKGKVYGSKYFVGNLNR
LMNVKAKYDPVNFFRHEQSIPPLRAM. back to topmRNA from alignment at A01_BnaDARv10:6202761..6204341+ Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >A01p12230.1_BnaDARv10-RA ID=A01p12230.1_BnaDARv10-RA|Name=A01p12230.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=1581bp|location=Sequence derived from alignment at A01_BnaDARv10:6202761..6204341+ (Brassica napus)
ATGAAAGTAGTTTTCGTTATGTTTCTTGCTATGCTTGTTTCAGTTTCATC
ACAAGCAGTAGTACAGAAACCAAATATAGGAAACTTCCTCCAATGCCTTC
GTGATTGGAGCGATCCGAAGAATCCCATCACAAAAGCCATCTTCACTCCC
CAAAACTCAACCTTCACCTCGTCTTACGTGTCATACACGAAAAACAAAAG
ATACTCAAACCCTAACGACACAAACCTAATAGCCATCGTTGAGGCAAAAC
ATGAATCCCATGTTCAGACAACTGTGGTCTGCGCTAAGTCCAACCGAGTC
CAGATCCGTATCCGAAGCGGCGGTCACGACTACGAAGGCCTTTCATACAC
CTCTTCCCTGCCGTTTGCAGTTCTCGATATGAACAATCTAAGGTCTATTA
CCATTGACGTGTCCGGCAAGAAAGCTTGGGTTCAAGCTGGTGCAACCCTA
GGAGAGCTCTACACAAAAATCTCTGAAGCGAGTAAAACGTTAGCGTTTCC
GGCTGGCGTTTGCCCCACTCTAGGAGCCGGAGGACACATCAGCGGCGGAG
GGTACGGAAACCTAATGAGAAAATACGGAATCTCTGTGGATCATGTCGTC
GATGCTCAGTTAGTTGATGTCAACGGCAAGATCTTGAACCGTGCCTCCAT
GGGAGAAGATTTGTTTTGGGCTATTCGCGGCGGTGGTGGCGCCAGCTTCG
GCGTTATCCTCTCGTGGACCATCAACCTAGTTGAAGTCCCAGAGACTATA
ACAGTTTTTAACGTTAACAAAACGTTAGGACAAGGAGCTACCGATGTTCT
GTACAAATGGCAGCTTGTCTCTAGCAAGTTGCCTAGAGAGCTTTTCTTGA
GAGCAATGCCTCAAATCACAAAAGGAGCGAATAAAACCATCGCGGTTAAG
TTCATCGCTCAGTTCTTAGGCTCATCAAAGAAGCTCATGGAGATTATAAA
CAAGAACTTACCTGAACTAGGGCTAAAAGGCGAAGATTGCTACGAAATGA
GCTGGCTTAATACGACGACGTTTTGGGCGGACTACCCGGTCGGGACATCG
ACAAGTGTTCTTCTGAAAAGGCCATCTACTCCGCCAGGAGCGTTCTTCAA
AAGCAAATCAGATTACGTCAAGAAACCGATCCCTAAAGAAGGTATGGAGA
AGATGTGGAAAACAATGTTGAAGTTCAACAACCATGTGTTTATGCAATGG
AACCCTTACGGTGGAGTGATGGACAAGATTGCGGCGAATGCAACCGCGTT
TCCTCACAGGAAAGGAAACTTGTTCAAGATTCAGTATTTTGCGTTATGGA
TAGACGCAAACGCCACAAAAGCTAACCTAGCTTTGATGAAAGAACTTTAT
GATGTGGCTGAGACGTACGTGTCAAGCAACCCGAGAGAGGCGTTTTTGAA
TTATAGAGACATTGATGTTGGAAGCAATCCTAGTGGTATGACAAATGTTG
CTAAAGGTAAGGTCTATGGATCCAAGTATTTCGTAGGGAACTTGAACAGA
TTGATGAATGTTAAAGCTAAGTATGATCCTGTTAATTTCTTTAGGCATGA
GCAGAGTATTCCTCCTCTTCGTGCAATGTAA back to topCoding sequence (CDS) from alignment at A01_BnaDARv10:6202761..6204341+ >A01p12230.1_BnaDARv10-RA ID=A01p12230.1_BnaDARv10-RA|Name=A01p12230.1_BnaDARv10-RA|organism=Brassica napus|type=CDS|length=1581bp|location=Sequence derived from alignment at A01_BnaDARv10:6202761..6204341+ (Brassica napus)
ATGAAAGTAGTTTTCGTTATGTTTCTTGCTATGCTTGTTTCAGTTTCATC
ACAAGCAGTAGTACAGAAACCAAATATAGGAAACTTCCTCCAATGCCTTC
GTGATTGGAGCGATCCGAAGAATCCCATCACAAAAGCCATCTTCACTCCC
CAAAACTCAACCTTCACCTCGTCTTACGTGTCATACACGAAAAACAAAAG
ATACTCAAACCCTAACGACACAAACCTAATAGCCATCGTTGAGGCAAAAC
ATGAATCCCATGTTCAGACAACTGTGGTCTGCGCTAAGTCCAACCGAGTC
CAGATCCGTATCCGAAGCGGCGGTCACGACTACGAAGGCCTTTCATACAC
CTCTTCCCTGCCGTTTGCAGTTCTCGATATGAACAATCTAAGGTCTATTA
CCATTGACGTGTCCGGCAAGAAAGCTTGGGTTCAAGCTGGTGCAACCCTA
GGAGAGCTCTACACAAAAATCTCTGAAGCGAGTAAAACGTTAGCGTTTCC
GGCTGGCGTTTGCCCCACTCTAGGAGCCGGAGGACACATCAGCGGCGGAG
GGTACGGAAACCTAATGAGAAAATACGGAATCTCTGTGGATCATGTCGTC
GATGCTCAGTTAGTTGATGTCAACGGCAAGATCTTGAACCGTGCCTCCAT
GGGAGAAGATTTGTTTTGGGCTATTCGCGGCGGTGGTGGCGCCAGCTTCG
GCGTTATCCTCTCGTGGACCATCAACCTAGTTGAAGTCCCAGAGACTATA
ACAGTTTTTAACGTTAACAAAACGTTAGGACAAGGAGCTACCGATGTTCT
GTACAAATGGCAGCTTGTCTCTAGCAAGTTGCCTAGAGAGCTTTTCTTGA
GAGCAATGCCTCAAATCACAAAAGGAGCGAATAAAACCATCGCGGTTAAG
TTCATCGCTCAGTTCTTAGGCTCATCAAAGAAGCTCATGGAGATTATAAA
CAAGAACTTACCTGAACTAGGGCTAAAAGGCGAAGATTGCTACGAAATGA
GCTGGCTTAATACGACGACGTTTTGGGCGGACTACCCGGTCGGGACATCG
ACAAGTGTTCTTCTGAAAAGGCCATCTACTCCGCCAGGAGCGTTCTTCAA
AAGCAAATCAGATTACGTCAAGAAACCGATCCCTAAAGAAGGTATGGAGA
AGATGTGGAAAACAATGTTGAAGTTCAACAACCATGTGTTTATGCAATGG
AACCCTTACGGTGGAGTGATGGACAAGATTGCGGCGAATGCAACCGCGTT
TCCTCACAGGAAAGGAAACTTGTTCAAGATTCAGTATTTTGCGTTATGGA
TAGACGCAAACGCCACAAAAGCTAACCTAGCTTTGATGAAAGAACTTTAT
GATGTGGCTGAGACGTACGTGTCAAGCAACCCGAGAGAGGCGTTTTTGAA
TTATAGAGACATTGATGTTGGAAGCAATCCTAGTGGTATGACAAATGTTG
CTAAAGGTAAGGTCTATGGATCCAAGTATTTCGTAGGGAACTTGAACAGA
TTGATGAATGTTAAAGCTAAGTATGATCCTGTTAATTTCTTTAGGCATGA
GCAGAGTATTCCTCCTCTTCGTGCAATGTAA back to top
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