Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1344 |
| Exons | 6 |
| Cds size | 1344 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p11450.1_BnaDARv10 | A01p11450.1_BnaDARv10 | Brassica napus | gene | A01_BnaDARv10 5786960..5789175 + |
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1626340555.1445062-CDS-A01_BnaDARv10:5786959..5787279 | 1626340555.1445062-CDS-A01_BnaDARv10:5786959..5787279 | Brassica napus | CDS | A01_BnaDARv10 5786960..5787279 + |
| 1626340555.1528642-CDS-A01_BnaDARv10:5787581..5787663 | 1626340555.1528642-CDS-A01_BnaDARv10:5787581..5787663 | Brassica napus | CDS | A01_BnaDARv10 5787582..5787663 + |
| 1626340555.1601648-CDS-A01_BnaDARv10:5787992..5788118 | 1626340555.1601648-CDS-A01_BnaDARv10:5787992..5788118 | Brassica napus | CDS | A01_BnaDARv10 5787993..5788118 + |
| 1626340555.1675005-CDS-A01_BnaDARv10:5788199..5788381 | 1626340555.1675005-CDS-A01_BnaDARv10:5788199..5788381 | Brassica napus | CDS | A01_BnaDARv10 5788200..5788381 + |
| 1626340555.174932-CDS-A01_BnaDARv10:5788460..5788609 | 1626340555.174932-CDS-A01_BnaDARv10:5788460..5788609 | Brassica napus | CDS | A01_BnaDARv10 5788461..5788609 + |
| 1626340555.182237-CDS-A01_BnaDARv10:5788690..5789175 | 1626340555.182237-CDS-A01_BnaDARv10:5788690..5789175 | Brassica napus | CDS | A01_BnaDARv10 5788691..5789175 + |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p11450.1_BnaDARv10_exon1 | A01p11450.1_BnaDARv10_exon1 | Brassica napus | exon | A01_BnaDARv10 5786960..5787279 + |
| A01p11450.1_BnaDARv10_exon2 | A01p11450.1_BnaDARv10_exon2 | Brassica napus | exon | A01_BnaDARv10 5787582..5787663 + |
| A01p11450.1_BnaDARv10_exon3 | A01p11450.1_BnaDARv10_exon3 | Brassica napus | exon | A01_BnaDARv10 5787993..5788118 + |
| A01p11450.1_BnaDARv10_exon4 | A01p11450.1_BnaDARv10_exon4 | Brassica napus | exon | A01_BnaDARv10 5788200..5788381 + |
| A01p11450.1_BnaDARv10_exon5 | A01p11450.1_BnaDARv10_exon5 | Brassica napus | exon | A01_BnaDARv10 5788461..5788609 + |
| A01p11450.1_BnaDARv10_exon6 | A01p11450.1_BnaDARv10_exon6 | Brassica napus | exon | A01_BnaDARv10 5788691..5789175 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >A01p11450.1_BnaDARv10-RA ID=A01p11450.1_BnaDARv10-RA|Name=A01p11450.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=1344bp|location=Sequence derived from alignment at A01_BnaDARv10:5786960..5789175+ (Brassica napus)|Notes=Excludes all bases but those of type(s): exon.
ATGATCTTTCTCGATGTTTACTGCATTGTTAAGTTGATTTCAGTTCTTGT
TAAGAGGTTTACCACAATTCTAATATTCATCACAATCTCTTTAACAGTCA
AAAAGATCATCGCTTTCTGCGTACCAATGGATGGAACGTTGCCTGTGAAG
GTTCCTGGCAACCAGGGCGATGATGCTACGTCTGTCTCTTGGTATCTTTC
AAGACAAGAAATTGAAAAAAACTCACCATCAAGACGAGATGGTATCGGTT
TGAAAAAAGAGATTCGCCTACGCAAGTCTTACTGTACCTTCTTGAAAAAT
CTCGGTGTGAGGTTGAAAGTTCCCCAGATAACAATAGCCACTGCTATAGT
ATTCTGTCACCGCTTCTTCCTTCGTCAGTCACACGCTAAGAATGACAGAT
GGACCATTGCAACAGCATGCATGTTCCTTGCTGGGAAGGCTGAGGAAACT
CCACGGGTTTTACAAGACGTTGCTATTGTCTCTTATGAGATTATACACAA
GAAGGATGTCCCTGCTGCCCAGAGAAAGGAAGTATGTGAGCAACAGAAAA
AGAGTGTGTTAAGCGCAGAGGAGCTACTTCTTTCTACGTTAAACTTCGAT
CTCTGTGTTGGTCACCCTTACGAACCTCTGATAGACGCAATTAAGAAGTA
TAAGGTTGAAGAGGTCAAGGCCCAGTTTCCTCAAGTTGCATGGAGTTTTG
TCAACGATTGTTATGGGACCACACTCTGCCTGCAATATAAGCCTCGTCAA
ATAGCAGCAGGTGCTTTTTTCCTTGCTGCTGAGCACCTAACAGTGGACTT
ACAATCATACGGAGAGGGCTTGTTGCAAGAGTTTGATATCTCACCAGGTC
AATTAGAGGATATCCGTGGCCAGATGCTTGAGCTTTATGAGAAAAAGCAT
GTTTCTACAACTCAAGGAAGCGTAGTCGAAAGAAGCAACGGTGGAGACAT
AGTGCATCAAACTGTCTCAAAGGAAGTGGATTCGGCAGATAAATGTCCAA
GTTCTGATACTGGAGGAGACCCATCGAAAGCCAATCTAAGCCAGAGCAAT
GATCAGATAGTGCATGATGATGTGTCTAGGCCTGAAGGAATTGAAAAGGA
TAACTCAAAAATAGAAGCAGGAGAGAATCAAGACGGCCATTCTATTGATG
AAGACTCGCAACTGCGTGCAGAGGAGGTGGAGGGTGAAGGAGATAAAGAT
AAAAAGTCATCTGAGGAGGAAGGTATAAAGCAGGATTTGTCTGAAAGAGA
AGTAGAAGATGTGGAGCTGCGTGATGAAGATGACAAAACAGTGGAGATGG
GAAGTCAATGCTCTCTAATAGCAACACCAGTGAGATTATTCTAG back to topprotein sequence of A01p11450.1_BnaDARv10-RA >A01p11450.1_BnaDARv10-PA ID=A01p11450.1_BnaDARv10-PA|Name=A01p11450.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=448bp
MIFLDVYCIVKLISVLVKRFTTILIFITISLTVKKIIAFCVPMDGTLPVK
VPGNQGDDATSVSWYLSRQEIEKNSPSRRDGIGLKKEIRLRKSYCTFLKN
LGVRLKVPQITIATAIVFCHRFFLRQSHAKNDRWTIATACMFLAGKAEET
PRVLQDVAIVSYEIIHKKDVPAAQRKEVCEQQKKSVLSAEELLLSTLNFD
LCVGHPYEPLIDAIKKYKVEEVKAQFPQVAWSFVNDCYGTTLCLQYKPRQ
IAAGAFFLAAEHLTVDLQSYGEGLLQEFDISPGQLEDIRGQMLELYEKKH
VSTTQGSVVERSNGGDIVHQTVSKEVDSADKCPSSDTGGDPSKANLSQSN
DQIVHDDVSRPEGIEKDNSKIEAGENQDGHSIDEDSQLRAEEVEGEGDKD
KKSSEEEGIKQDLSEREVEDVELRDEDDKTVEMGSQCSLIATPVRLF. back to topmRNA from alignment at A01_BnaDARv10:5786960..5789175+ Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >A01p11450.1_BnaDARv10-RA ID=A01p11450.1_BnaDARv10-RA|Name=A01p11450.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=2216bp|location=Sequence derived from alignment at A01_BnaDARv10:5786960..5789175+ (Brassica napus)
ATGATCTTTCTCGATGTTTACTGCATTGTTAAGTTGATTTCAGTTCTTGT
TAAGAGGTTTACCACAATTCTAATATTCATCACAATCTCTTTAACAGTCA
AAAAGATCATCGCTTTCTGCGTACCAATGGATGGAACGTTGCCTGTGAAG
GTTCCTGGCAACCAGGGCGATGATGCTACGTCTGTCTCTTGGTATCTTTC
AAGACAAGAAATTGAAAAAAACTCACCATCAAGACGAGATGGTATCGGTT
TGAAAAAAGAGATTCGCCTACGCAAGTCTTACTGTACCTTCTTGAAAAAT
CTCGGTGTGAGGTTGAAAGTGTATGTTTCTTCTCCTTACTACCTCCATTT
GTTATGCTACCTTCCCTTAAGATTCACCATCTTGAGTTAAGAAAATGTAA
TCCTTTTGACAACATGAATGTAGGCTTTGGTGTGTTAGAAATTCTATAGT
TAGGTTTGGTGCTATCATATAGGGGAATTGAAACTCAATGTTAGTTTAGT
TTAGCATTGGTTTTAAAGCTGCTAATGACATATGTAGTTTCATCAGAATG
TGAATAAACTTTCTCGTTTTTTTTTTGGTTTCGTGGATGAATGTGGCTAA
TAATAATAATCTCTTAACGCAGTCCCCAGATAACAATAGCCACTGCTATA
GTATTCTGTCACCGCTTCTTCCTTCGTCAGTCACACGCTAAGAATGACAG
ATGGGTGAGTTTAGTTTGACGTTAACAAAATGGTATTTATTTAGTCTCTG
ATCTTCTGTGAGTCTATTCGCCTATTAAGTCTCTGGTTTCTTAGAATATC
CTAGCTCCTCGAGGTTCCTCTATAGAGTGTTCTCCATCTCTGTGTCATTT
TTCGGCTAGTTCTAGACAAATTGTACTAGTTGATTGATCATATGAGTCTA
CCTCAAAAGAAATGCCCGTATGTGATAGAGATCAAGCTCTCTGTTTTATT
TTTCCGGTTTGGATAGGGGTGTGCATGGTTAATGAATTTGTGATTAGTAC
TTATGCCTTTTGCCTGTTACATCTTCTCTGCAGACCATTGCAACAGCATG
CATGTTCCTTGCTGGGAAGGCTGAGGAAACTCCACGGGTTTTACAAGACG
TTGCTATTGTCTCTTATGAGATTATACACAAGAAGGATGTCCCTGCTGCC
CAGAGAAAGGTATGCTTCCAATCCTACAGCCCTCGTCCATTTCCACTTCG
TTTATTACTGTTACATATAAGTGTTGTTTCGGTTTTGCAGGAAGTATGTG
AGCAACAGAAAAAGAGTGTGTTAAGCGCAGAGGAGCTACTTCTTTCTACG
TTAAACTTCGATCTCTGTGTTGGTCACCCTTACGAACCTCTGATAGACGC
AATTAAGAAGTATAAGGTTGAAGAGGTCAAGGCCCAGTTTCCTCAAGTTG
CATGGAGTTTTGTCAACGATTGGTAATGCTTGAAATGTTCCATTCGAAAA
CCTTTTTTTGAATTCTTCTTCTTTATTTAATCATCACAAGTCATTTTGCA
GTTATGGGACCACACTCTGCCTGCAATATAAGCCTCGTCAAATAGCAGCA
GGTGCTTTTTTCCTTGCTGCTGAGCACCTAACAGTGGACTTACAATCATA
CGGAGAGGGCTTGTTGCAAGAGTTTGATATCTCACCAGGTCAATTAGAGG
GTATGTGTTAATCTTTTTGACTTTGATGTCTCTCTAGACTTTGTTGCTTC
GGTTTATTTTATCATTTTTTTCTGTTTTCAGATATCCGTGGCCAGATGCT
TGAGCTTTATGAGAAAAAGCATGTTTCTACAACTCAAGGAAGCGTAGTCG
AAAGAAGCAACGGTGGAGACATAGTGCATCAAACTGTCTCAAAGGAAGTG
GATTCGGCAGATAAATGTCCAAGTTCTGATACTGGAGGAGACCCATCGAA
AGCCAATCTAAGCCAGAGCAATGATCAGATAGTGCATGATGATGTGTCTA
GGCCTGAAGGAATTGAAAAGGATAACTCAAAAATAGAAGCAGGAGAGAAT
CAAGACGGCCATTCTATTGATGAAGACTCGCAACTGCGTGCAGAGGAGGT
GGAGGGTGAAGGAGATAAAGATAAAAAGTCATCTGAGGAGGAAGGTATAA
AGCAGGATTTGTCTGAAAGAGAAGTAGAAGATGTGGAGCTGCGTGATGAA
GATGACAAAACAGTGGAGATGGGAAGTCAATGCTCTCTAATAGCAACACC
AGTGAGATTATTCTAG back to topCoding sequence (CDS) from alignment at A01_BnaDARv10:5786960..5789175+ >A01p11450.1_BnaDARv10-RA ID=A01p11450.1_BnaDARv10-RA|Name=A01p11450.1_BnaDARv10-RA|organism=Brassica napus|type=CDS|length=1344bp|location=Sequence derived from alignment at A01_BnaDARv10:5786960..5789175+ (Brassica napus)
ATGATCTTTCTCGATGTTTACTGCATTGTTAAGTTGATTTCAGTTCTTGT
TAAGAGGTTTACCACAATTCTAATATTCATCACAATCTCTTTAACAGTCA
AAAAGATCATCGCTTTCTGCGTACCAATGGATGGAACGTTGCCTGTGAAG
GTTCCTGGCAACCAGGGCGATGATGCTACGTCTGTCTCTTGGTATCTTTC
AAGACAAGAAATTGAAAAAAACTCACCATCAAGACGAGATGGTATCGGTT
TGAAAAAAGAGATTCGCCTACGCAAGTCTTACTGTACCTTCTTGAAAAAT
CTCGGTGTGAGGTTGAAAGTTCCCCAGATAACAATAGCCACTGCTATAGT
ATTCTGTCACCGCTTCTTCCTTCGTCAGTCACACGCTAAGAATGACAGAT
GGACCATTGCAACAGCATGCATGTTCCTTGCTGGGAAGGCTGAGGAAACT
CCACGGGTTTTACAAGACGTTGCTATTGTCTCTTATGAGATTATACACAA
GAAGGATGTCCCTGCTGCCCAGAGAAAGGAAGTATGTGAGCAACAGAAAA
AGAGTGTGTTAAGCGCAGAGGAGCTACTTCTTTCTACGTTAAACTTCGAT
CTCTGTGTTGGTCACCCTTACGAACCTCTGATAGACGCAATTAAGAAGTA
TAAGGTTGAAGAGGTCAAGGCCCAGTTTCCTCAAGTTGCATGGAGTTTTG
TCAACGATTGTTATGGGACCACACTCTGCCTGCAATATAAGCCTCGTCAA
ATAGCAGCAGGTGCTTTTTTCCTTGCTGCTGAGCACCTAACAGTGGACTT
ACAATCATACGGAGAGGGCTTGTTGCAAGAGTTTGATATCTCACCAGGTC
AATTAGAGGATATCCGTGGCCAGATGCTTGAGCTTTATGAGAAAAAGCAT
GTTTCTACAACTCAAGGAAGCGTAGTCGAAAGAAGCAACGGTGGAGACAT
AGTGCATCAAACTGTCTCAAAGGAAGTGGATTCGGCAGATAAATGTCCAA
GTTCTGATACTGGAGGAGACCCATCGAAAGCCAATCTAAGCCAGAGCAAT
GATCAGATAGTGCATGATGATGTGTCTAGGCCTGAAGGAATTGAAAAGGA
TAACTCAAAAATAGAAGCAGGAGAGAATCAAGACGGCCATTCTATTGATG
AAGACTCGCAACTGCGTGCAGAGGAGGTGGAGGGTGAAGGAGATAAAGAT
AAAAAGTCATCTGAGGAGGAAGGTATAAAGCAGGATTTGTCTGAAAGAGA
AGTAGAAGATGTGGAGCTGCGTGATGAAGATGACAAAACAGTGGAGATGG
GAAGTCAATGCTCTCTAATAGCAACACCAGTGAGATTATTCTAG back to top
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