Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1967 |
| Exons | 1 |
| Cds size | 1791 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p11130.1_BnaDARv10 | A01p11130.1_BnaDARv10 | Brassica napus | gene | A01_BnaDARv10 5585427..5587393 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1626340551.7138553-CDS-A01_BnaDARv10:5585426..5587217 | 1626340551.7138553-CDS-A01_BnaDARv10:5585426..5587217 | Brassica napus | CDS | A01_BnaDARv10 5585427..5587217 + |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p11130.1_BnaDARv10_exon1 | A01p11130.1_BnaDARv10_exon1 | Brassica napus | exon | A01_BnaDARv10 5585427..5587393 + |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1626340551.7226763-three_prime_UTR-A01_BnaDARv10:5587217..5587393 | 1626340551.7226763-three_prime_UTR-A01_BnaDARv10:5587217..5587393 | Brassica napus | three_prime_UTR | A01_BnaDARv10 5587218..5587393 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >A01p11130.1_BnaDARv10-RA ID=A01p11130.1_BnaDARv10-RA|Name=A01p11130.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=1967bp|location=Sequence derived from alignment at A01_BnaDARv10:5585427..5587393+ (Brassica napus)|Notes=Excludes all bases but those of type(s): exon.
ATGGACTCTCTTTCTTCCTCTTCCTTCATCTCCACCTTCTCTCCTCCATC
CTCTCTTCTTCTTCCCCGCCCTTCTTCCTCTCGCCGTCTCCTCCGTATCA
ACTCCGCCGTCGTCGAAGAACGATCGCCCATCACTAACCCAAGCCAAAAC
AATGACCTTCCTCCGAGCAAACCTAAGAAACTCTACACTCATCGAACCAA
CCACACCGCCGTTTCATCTCCCGCGAAACCCCGACCACAACCACAAACGT
CTCTAGCAACAGCTCTCTTCACCACCATGGAAGAAGTCATCAACACGTTT
ATCGACCCACCGTCACGTCCTTCCGTAGATCCAAAACACGTCCTCTCAGA
CAACTTCGCTCCTGTCCTCGACGAGCTTCCTCCCACTGAGTGCCAGATCA
TCCACGGCTCTCTTCCGCCGTCTCTCAACGGCGCTTACATCCGTAACGGC
CCTAACCCACAGTTTCTCCCACGTGGTCCCTACCATTTATTTGACGGTGA
CGGTATGCTTCACGCGATCCGCATCCGTGACGGTAAAGCCACGCTCTGCA
GCAGATACGTCAAGACTTACAAATACAACGTTGAGAAACAAACCGGAACT
CCGGTTATCCCTAACGTCTTTTCTGGATTTAACGGCGTACCGGCGTCAAT
GGCTCGCGGAGCTTTAACGGCGTTTAGAGTTTTAGCTGGACAGTTTAATC
CGATCAACGGCATTGGTTTAGCGAACACGAGCCTCGCTTTCTTCTGTAAC
CGTCTCTTCGCTTTAGGAGAATCCGATTTACCGTACGCCGTCCGATTAAC
GGAGAGCGGAGACATCGTGACGATCGGACGGCACGATTTCGACGGGAAGT
TAGCGATGAGCATGACAGCTCATCCGAAAACCGATCCCGAAACCGGAGAG
ACGTTCGCTTTCCGGTACGGTCCGGTTCCACCGTTTCTAACGTTTTTCCG
GTTCGACTCGACCGGGAATAAGCGAAAAGACGTTCCGGTTTTCTCCATGA
CGTCTCCCTCCTTCCTCCACGACTTCGCGATCACGAGCCGTTACGCGATC
TTCTCGGAGATTCAGATTCGGATGAGGATGGACTCGATGCTCGAAGGAGG
ATCTCCCGTCGGCGCCGATAACGGCAAAACGCCGAGGCTCGGAGTGATCC
CGCGCTACGCCGAAGGCGAATCGGAGATGAAATGGTTCGAGGTTCCTGGA
TTCAACATCATCCACGCCATCAACGCCTGGGACGAAGACGACGGTGACAC
CATCGTTCTCATCGCTCCCAACATTATGTCGATCGAGCACACGCTGGAGA
GGATGGAGCTCGTCCACGCCTTGGTGGAGAAGGTGAAGATCGATCTCGTC
ACCGGGATCGTGACACGTCATCCGATCTCCGCGAGGAACCTCGATTTCGC
CGTGATCAATCCGGCGTTCGTTGGGAGACGGAGCCGGTACGTGTACGCGG
CGATCGGAGATCCGATGCCGAAGATCTCCGGGGTGGTGAAGCTCGACGTG
ACTAGAGGAGATAGGGACGATTGCACGGTGGCGCGTAGGATGTACGGTCC
AGGTTGTTACGGAGGAGAACCGTTTTTCGTAGCTAGGGATCCTGGTGATC
CGGAGGCGGAGGAGGATGACGGTTACGTGGTGACGTATGTGCATGATGAG
GTGGCGGGAGAGTCGAAGTTTCTTGTGATGGACGCGAAGTCGCCGGAGCT
TGAGGTCGTAGCCGCTGTGAGGTTGCCGCGAAGGGTTCCGTACGGATTCC
ATGGACTATTTGTCAAGGAGAGTGACCTTAATAAGCTTTAGTGATAGAAT
CTATAGGTAATTAAACAAAGGATTAAGTTCTTAATCACGTTCCGTATAAT
GGAAACAAAACATATATGGTGTTGTTGCATTTTAAACATTATAGTATACA
TAGTTTGGTAGTTGTCGAATGTATATAATAATATAAGCCTGTTAATAAAA
AACGTATTATTCATTTC back to topprotein sequence of A01p11130.1_BnaDARv10-RA >A01p11130.1_BnaDARv10-PA ID=A01p11130.1_BnaDARv10-PA|Name=A01p11130.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=597bp
MDSLSSSSFISTFSPPSSLLLPRPSSSRRLLRINSAVVEERSPITNPSQN
NDLPPSKPKKLYTHRTNHTAVSSPAKPRPQPQTSLATALFTTMEEVINTF
IDPPSRPSVDPKHVLSDNFAPVLDELPPTECQIIHGSLPPSLNGAYIRNG
PNPQFLPRGPYHLFDGDGMLHAIRIRDGKATLCSRYVKTYKYNVEKQTGT
PVIPNVFSGFNGVPASMARGALTAFRVLAGQFNPINGIGLANTSLAFFCN
RLFALGESDLPYAVRLTESGDIVTIGRHDFDGKLAMSMTAHPKTDPETGE
TFAFRYGPVPPFLTFFRFDSTGNKRKDVPVFSMTSPSFLHDFAITSRYAI
FSEIQIRMRMDSMLEGGSPVGADNGKTPRLGVIPRYAEGESEMKWFEVPG
FNIIHAINAWDEDDGDTIVLIAPNIMSIEHTLERMELVHALVEKVKIDLV
TGIVTRHPISARNLDFAVINPAFVGRRSRYVYAAIGDPMPKISGVVKLDV
TRGDRDDCTVARRMYGPGCYGGEPFFVARDPGDPEAEEDDGYVVTYVHDE
VAGESKFLVMDAKSPELEVVAAVRLPRRVPYGFHGLFVKESDLNKL. back to topmRNA from alignment at A01_BnaDARv10:5585427..5587393+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >A01p11130.1_BnaDARv10-RA ID=A01p11130.1_BnaDARv10-RA|Name=A01p11130.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=1967bp|location=Sequence derived from alignment at A01_BnaDARv10:5585427..5587393+ (Brassica napus)
ATGGACTCTCTTTCTTCCTCTTCCTTCATCTCCACCTTCTCTCCTCCATC
CTCTCTTCTTCTTCCCCGCCCTTCTTCCTCTCGCCGTCTCCTCCGTATCA
ACTCCGCCGTCGTCGAAGAACGATCGCCCATCACTAACCCAAGCCAAAAC
AATGACCTTCCTCCGAGCAAACCTAAGAAACTCTACACTCATCGAACCAA
CCACACCGCCGTTTCATCTCCCGCGAAACCCCGACCACAACCACAAACGT
CTCTAGCAACAGCTCTCTTCACCACCATGGAAGAAGTCATCAACACGTTT
ATCGACCCACCGTCACGTCCTTCCGTAGATCCAAAACACGTCCTCTCAGA
CAACTTCGCTCCTGTCCTCGACGAGCTTCCTCCCACTGAGTGCCAGATCA
TCCACGGCTCTCTTCCGCCGTCTCTCAACGGCGCTTACATCCGTAACGGC
CCTAACCCACAGTTTCTCCCACGTGGTCCCTACCATTTATTTGACGGTGA
CGGTATGCTTCACGCGATCCGCATCCGTGACGGTAAAGCCACGCTCTGCA
GCAGATACGTCAAGACTTACAAATACAACGTTGAGAAACAAACCGGAACT
CCGGTTATCCCTAACGTCTTTTCTGGATTTAACGGCGTACCGGCGTCAAT
GGCTCGCGGAGCTTTAACGGCGTTTAGAGTTTTAGCTGGACAGTTTAATC
CGATCAACGGCATTGGTTTAGCGAACACGAGCCTCGCTTTCTTCTGTAAC
CGTCTCTTCGCTTTAGGAGAATCCGATTTACCGTACGCCGTCCGATTAAC
GGAGAGCGGAGACATCGTGACGATCGGACGGCACGATTTCGACGGGAAGT
TAGCGATGAGCATGACAGCTCATCCGAAAACCGATCCCGAAACCGGAGAG
ACGTTCGCTTTCCGGTACGGTCCGGTTCCACCGTTTCTAACGTTTTTCCG
GTTCGACTCGACCGGGAATAAGCGAAAAGACGTTCCGGTTTTCTCCATGA
CGTCTCCCTCCTTCCTCCACGACTTCGCGATCACGAGCCGTTACGCGATC
TTCTCGGAGATTCAGATTCGGATGAGGATGGACTCGATGCTCGAAGGAGG
ATCTCCCGTCGGCGCCGATAACGGCAAAACGCCGAGGCTCGGAGTGATCC
CGCGCTACGCCGAAGGCGAATCGGAGATGAAATGGTTCGAGGTTCCTGGA
TTCAACATCATCCACGCCATCAACGCCTGGGACGAAGACGACGGTGACAC
CATCGTTCTCATCGCTCCCAACATTATGTCGATCGAGCACACGCTGGAGA
GGATGGAGCTCGTCCACGCCTTGGTGGAGAAGGTGAAGATCGATCTCGTC
ACCGGGATCGTGACACGTCATCCGATCTCCGCGAGGAACCTCGATTTCGC
CGTGATCAATCCGGCGTTCGTTGGGAGACGGAGCCGGTACGTGTACGCGG
CGATCGGAGATCCGATGCCGAAGATCTCCGGGGTGGTGAAGCTCGACGTG
ACTAGAGGAGATAGGGACGATTGCACGGTGGCGCGTAGGATGTACGGTCC
AGGTTGTTACGGAGGAGAACCGTTTTTCGTAGCTAGGGATCCTGGTGATC
CGGAGGCGGAGGAGGATGACGGTTACGTGGTGACGTATGTGCATGATGAG
GTGGCGGGAGAGTCGAAGTTTCTTGTGATGGACGCGAAGTCGCCGGAGCT
TGAGGTCGTAGCCGCTGTGAGGTTGCCGCGAAGGGTTCCGTACGGATTCC
ATGGACTATTTGTCAAGGAGAGTGACCTTAATAAGCTTTAGTGATAGAAT
CTATAGGTAATTAAACAAAGGATTAAGTTCTTAATCACGTTCCGTATAAT
GGAAACAAAACATATATGGTGTTGTTGCATTTTAAACATTATAGTATACA
TAGTTTGGTAGTTGTCGAATGTATATAATAATATAAGCCTGTTAATAAAA
AACGTATTATTCATTTC back to topCoding sequence (CDS) from alignment at A01_BnaDARv10:5585427..5587393+ >A01p11130.1_BnaDARv10-RA ID=A01p11130.1_BnaDARv10-RA|Name=A01p11130.1_BnaDARv10-RA|organism=Brassica napus|type=CDS|length=1791bp|location=Sequence derived from alignment at A01_BnaDARv10:5585427..5587393+ (Brassica napus)
ATGGACTCTCTTTCTTCCTCTTCCTTCATCTCCACCTTCTCTCCTCCATC
CTCTCTTCTTCTTCCCCGCCCTTCTTCCTCTCGCCGTCTCCTCCGTATCA
ACTCCGCCGTCGTCGAAGAACGATCGCCCATCACTAACCCAAGCCAAAAC
AATGACCTTCCTCCGAGCAAACCTAAGAAACTCTACACTCATCGAACCAA
CCACACCGCCGTTTCATCTCCCGCGAAACCCCGACCACAACCACAAACGT
CTCTAGCAACAGCTCTCTTCACCACCATGGAAGAAGTCATCAACACGTTT
ATCGACCCACCGTCACGTCCTTCCGTAGATCCAAAACACGTCCTCTCAGA
CAACTTCGCTCCTGTCCTCGACGAGCTTCCTCCCACTGAGTGCCAGATCA
TCCACGGCTCTCTTCCGCCGTCTCTCAACGGCGCTTACATCCGTAACGGC
CCTAACCCACAGTTTCTCCCACGTGGTCCCTACCATTTATTTGACGGTGA
CGGTATGCTTCACGCGATCCGCATCCGTGACGGTAAAGCCACGCTCTGCA
GCAGATACGTCAAGACTTACAAATACAACGTTGAGAAACAAACCGGAACT
CCGGTTATCCCTAACGTCTTTTCTGGATTTAACGGCGTACCGGCGTCAAT
GGCTCGCGGAGCTTTAACGGCGTTTAGAGTTTTAGCTGGACAGTTTAATC
CGATCAACGGCATTGGTTTAGCGAACACGAGCCTCGCTTTCTTCTGTAAC
CGTCTCTTCGCTTTAGGAGAATCCGATTTACCGTACGCCGTCCGATTAAC
GGAGAGCGGAGACATCGTGACGATCGGACGGCACGATTTCGACGGGAAGT
TAGCGATGAGCATGACAGCTCATCCGAAAACCGATCCCGAAACCGGAGAG
ACGTTCGCTTTCCGGTACGGTCCGGTTCCACCGTTTCTAACGTTTTTCCG
GTTCGACTCGACCGGGAATAAGCGAAAAGACGTTCCGGTTTTCTCCATGA
CGTCTCCCTCCTTCCTCCACGACTTCGCGATCACGAGCCGTTACGCGATC
TTCTCGGAGATTCAGATTCGGATGAGGATGGACTCGATGCTCGAAGGAGG
ATCTCCCGTCGGCGCCGATAACGGCAAAACGCCGAGGCTCGGAGTGATCC
CGCGCTACGCCGAAGGCGAATCGGAGATGAAATGGTTCGAGGTTCCTGGA
TTCAACATCATCCACGCCATCAACGCCTGGGACGAAGACGACGGTGACAC
CATCGTTCTCATCGCTCCCAACATTATGTCGATCGAGCACACGCTGGAGA
GGATGGAGCTCGTCCACGCCTTGGTGGAGAAGGTGAAGATCGATCTCGTC
ACCGGGATCGTGACACGTCATCCGATCTCCGCGAGGAACCTCGATTTCGC
CGTGATCAATCCGGCGTTCGTTGGGAGACGGAGCCGGTACGTGTACGCGG
CGATCGGAGATCCGATGCCGAAGATCTCCGGGGTGGTGAAGCTCGACGTG
ACTAGAGGAGATAGGGACGATTGCACGGTGGCGCGTAGGATGTACGGTCC
AGGTTGTTACGGAGGAGAACCGTTTTTCGTAGCTAGGGATCCTGGTGATC
CGGAGGCGGAGGAGGATGACGGTTACGTGGTGACGTATGTGCATGATGAG
GTGGCGGGAGAGTCGAAGTTTCTTGTGATGGACGCGAAGTCGCCGGAGCT
TGAGGTCGTAGCCGCTGTGAGGTTGCCGCGAAGGGTTCCGTACGGATTCC
ATGGACTATTTGTCAAGGAGAGTGACCTTAATAAGCTTTAG back to top
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