Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 603 |
| Exons | 2 |
| Cds size | 603 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p09460.1_BnaDARv10 | A01p09460.1_BnaDARv10 | Brassica napus | gene | A01_BnaDARv10 4439122..4439807 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1626340534.4646661-CDS-A01_BnaDARv10:4439121..4439412 | 1626340534.4646661-CDS-A01_BnaDARv10:4439121..4439412 | Brassica napus | CDS | A01_BnaDARv10 4439122..4439412 + |
| 1626340534.471994-CDS-A01_BnaDARv10:4439495..4439807 | 1626340534.471994-CDS-A01_BnaDARv10:4439495..4439807 | Brassica napus | CDS | A01_BnaDARv10 4439496..4439807 + |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p09460.1_BnaDARv10_exon1 | A01p09460.1_BnaDARv10_exon1 | Brassica napus | exon | A01_BnaDARv10 4439122..4439412 + |
| A01p09460.1_BnaDARv10_exon2 | A01p09460.1_BnaDARv10_exon2 | Brassica napus | exon | A01_BnaDARv10 4439496..4439807 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >A01p09460.1_BnaDARv10-RA ID=A01p09460.1_BnaDARv10-RA|Name=A01p09460.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=603bp|location=Sequence derived from alignment at A01_BnaDARv10:4439122..4439807+ (Brassica napus)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGGAAACACAGCCGTTGTTGATAGCTTCATTGCCTGAGGCACCAAG
AAAGCCCAAGTCGAAAGTACAGAAAATGGCGAGGAAAGCATTTAAAGGAA
CAGCCCATCTCTCTAATCTCCTCCCGACCGGTTCGGTAATGGGTTTTCAA
ATAATGTGTCCTGTCCTATCTCATCAGGGTCAGTGTCCGACCATCGCCAG
TCGCTGGCTCACCTGCTTCCTCGTCTTCGTCTGCGCCGTCTCTTGCTTCC
TCCTTTCCTTCACCGACTCCTTCAGAGACCCACGCGGCAAGGTCAGGTAC
GGCTTGGCGACGCGGAGTGGTTTATCTGTGATGGAAGGAACGATTACTCT
AACGGACGAGGAGAAGGAAAAGTATAAGCTCAGGTTTCTTGATTTTGTGC
ATGCATTCATGTCCATGCTCGTCTTCTTTGCAATCTCCATGATTGATCAG
AACGTGATCCGTTGTCTATTCCCTGTTCCTTCTGAAGACATCAAAGAGCT
TCTCACCAGTTTGCCTATCATCATCGGCGTTATATGCGGCGGCTTCTTCC
TTGTGTGCCCCACTCGCCGTCACGGCATTGGATCTCCACTCACCAAAGAA
TAA back to topprotein sequence of A01p09460.1_BnaDARv10-RA >A01p09460.1_BnaDARv10-PA ID=A01p09460.1_BnaDARv10-PA|Name=A01p09460.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=201bp
MEETQPLLIASLPEAPRKPKSKVQKMARKAFKGTAHLSNLLPTGSVMGFQ
IMCPVLSHQGQCPTIASRWLTCFLVFVCAVSCFLLSFTDSFRDPRGKVRY
GLATRSGLSVMEGTITLTDEEKEKYKLRFLDFVHAFMSMLVFFAISMIDQ
NVIRCLFPVPSEDIKELLTSLPIIIGVICGGFFLVCPTRRHGIGSPLTKE
. back to topmRNA from alignment at A01_BnaDARv10:4439122..4439807+ Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >A01p09460.1_BnaDARv10-RA ID=A01p09460.1_BnaDARv10-RA|Name=A01p09460.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=686bp|location=Sequence derived from alignment at A01_BnaDARv10:4439122..4439807+ (Brassica napus)
ATGGAGGAAACACAGCCGTTGTTGATAGCTTCATTGCCTGAGGCACCAAG
AAAGCCCAAGTCGAAAGTACAGAAAATGGCGAGGAAAGCATTTAAAGGAA
CAGCCCATCTCTCTAATCTCCTCCCGACCGGTTCGGTAATGGGTTTTCAA
ATAATGTGTCCTGTCCTATCTCATCAGGGTCAGTGTCCGACCATCGCCAG
TCGCTGGCTCACCTGCTTCCTCGTCTTCGTCTGCGCCGTCTCTTGCTTCC
TCCTTTCCTTCACCGACTCCTTCAGAGACCCACGCGGCAAGGTCGCAAAC
ACATTCCCTCTTATCACTCGTATCCTTAGTTATTTTGTTACGTTTTGAAA
ACATTATGATTCTGTTCTTTACAGGTCAGGTACGGCTTGGCGACGCGGAG
TGGTTTATCTGTGATGGAAGGAACGATTACTCTAACGGACGAGGAGAAGG
AAAAGTATAAGCTCAGGTTTCTTGATTTTGTGCATGCATTCATGTCCATG
CTCGTCTTCTTTGCAATCTCCATGATTGATCAGAACGTGATCCGTTGTCT
ATTCCCTGTTCCTTCTGAAGACATCAAAGAGCTTCTCACCAGTTTGCCTA
TCATCATCGGCGTTATATGCGGCGGCTTCTTCCTTGTGTGCCCCACTCGC
CGTCACGGCATTGGATCTCCACTCACCAAAGAATAA back to topCoding sequence (CDS) from alignment at A01_BnaDARv10:4439122..4439807+ >A01p09460.1_BnaDARv10-RA ID=A01p09460.1_BnaDARv10-RA|Name=A01p09460.1_BnaDARv10-RA|organism=Brassica napus|type=CDS|length=603bp|location=Sequence derived from alignment at A01_BnaDARv10:4439122..4439807+ (Brassica napus)
ATGGAGGAAACACAGCCGTTGTTGATAGCTTCATTGCCTGAGGCACCAAG
AAAGCCCAAGTCGAAAGTACAGAAAATGGCGAGGAAAGCATTTAAAGGAA
CAGCCCATCTCTCTAATCTCCTCCCGACCGGTTCGGTAATGGGTTTTCAA
ATAATGTGTCCTGTCCTATCTCATCAGGGTCAGTGTCCGACCATCGCCAG
TCGCTGGCTCACCTGCTTCCTCGTCTTCGTCTGCGCCGTCTCTTGCTTCC
TCCTTTCCTTCACCGACTCCTTCAGAGACCCACGCGGCAAGGTCAGGTAC
GGCTTGGCGACGCGGAGTGGTTTATCTGTGATGGAAGGAACGATTACTCT
AACGGACGAGGAGAAGGAAAAGTATAAGCTCAGGTTTCTTGATTTTGTGC
ATGCATTCATGTCCATGCTCGTCTTCTTTGCAATCTCCATGATTGATCAG
AACGTGATCCGTTGTCTATTCCCTGTTCCTTCTGAAGACATCAAAGAGCT
TCTCACCAGTTTGCCTATCATCATCGGCGTTATATGCGGCGGCTTCTTCC
TTGTGTGCCCCACTCGCCGTCACGGCATTGGATCTCCACTCACCAAAGAA
TAA back to top
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