Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 880 |
| Exons | 7 |
| Cds size | 879 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p05990.1_BnaDARv10 | A01p05990.1_BnaDARv10 | Brassica napus | gene | A01_BnaDARv10 2714362..2716520 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1626340497.4703603-CDS-A01_BnaDARv10:2714361..2714463 | 1626340497.4703603-CDS-A01_BnaDARv10:2714361..2714463 | Brassica napus | CDS | A01_BnaDARv10 2714362..2714463 + |
| 1626340497.4772658-CDS-A01_BnaDARv10:2714901..2715020 | 1626340497.4772658-CDS-A01_BnaDARv10:2714901..2715020 | Brassica napus | CDS | A01_BnaDARv10 2714902..2715020 + |
| 1626340497.4836254-CDS-A01_BnaDARv10:2715099..2715224 | 1626340497.4836254-CDS-A01_BnaDARv10:2715099..2715224 | Brassica napus | CDS | A01_BnaDARv10 2715100..2715224 + |
| 1626340497.4896936-CDS-A01_BnaDARv10:2715305..2715387 | 1626340497.4896936-CDS-A01_BnaDARv10:2715305..2715387 | Brassica napus | CDS | A01_BnaDARv10 2715306..2715387 + |
| 1626340497.4959116-CDS-A01_BnaDARv10:2715462..2715580 | 1626340497.4959116-CDS-A01_BnaDARv10:2715462..2715580 | Brassica napus | CDS | A01_BnaDARv10 2715463..2715580 + |
| 1626340497.5020072-CDS-A01_BnaDARv10:2716118..2716304 | 1626340497.5020072-CDS-A01_BnaDARv10:2716118..2716304 | Brassica napus | CDS | A01_BnaDARv10 2716119..2716304 + |
| 1626340497.5080543-CDS-A01_BnaDARv10:2716373..2716520 | 1626340497.5080543-CDS-A01_BnaDARv10:2716373..2716520 | Brassica napus | CDS | A01_BnaDARv10 2716374..2716520 + |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p05990.1_BnaDARv10_exon1 | A01p05990.1_BnaDARv10_exon1 | Brassica napus | exon | A01_BnaDARv10 2714362..2714463 + |
| A01p05990.1_BnaDARv10_exon2 | A01p05990.1_BnaDARv10_exon2 | Brassica napus | exon | A01_BnaDARv10 2714902..2715020 + |
| A01p05990.1_BnaDARv10_exon3 | A01p05990.1_BnaDARv10_exon3 | Brassica napus | exon | A01_BnaDARv10 2715100..2715224 + |
| A01p05990.1_BnaDARv10_exon4 | A01p05990.1_BnaDARv10_exon4 | Brassica napus | exon | A01_BnaDARv10 2715306..2715387 + |
| A01p05990.1_BnaDARv10_exon5 | A01p05990.1_BnaDARv10_exon5 | Brassica napus | exon | A01_BnaDARv10 2715463..2715580 + |
| A01p05990.1_BnaDARv10_exon6 | A01p05990.1_BnaDARv10_exon6 | Brassica napus | exon | A01_BnaDARv10 2716119..2716304 + |
| A01p05990.1_BnaDARv10_exon7 | A01p05990.1_BnaDARv10_exon7 | Brassica napus | exon | A01_BnaDARv10 2716374..2716520 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >A01p05990.1_BnaDARv10-RA ID=A01p05990.1_BnaDARv10-RA|Name=A01p05990.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=879bp|location=Sequence derived from alignment at A01_BnaDARv10:2714362..2716520+ (Brassica napus)|Notes=Excludes all bases but those of type(s): exon.
TGTCTATTTCGAGAGTCTTCTTCTCGACCTGAAGTCCGGCAAATGCTCCT
CCGTCGTCGAGGCCCGGCTTCTACGGTTCGGGAGGCGAGGAACGTAAACG
CGCTCTCTGATCTCAATATTGAACCTGTAGATATTATTGGTGAAATCGTG
GCGGTGAAGAGCACCGTGTCTGACCCTCCGGAGGATAAGAACCGTGTCAT
GGTCACCGTCAAATTAGAAAATGATGTGTCTGTCACTCTTAGTCTGTTTG
ACGCTCAAGCCGTTTTATTCCACCAGAAGCTTGGAGGCATGCGTGATGAT
CCTAAAGTGATTGTTGCCACAAGCATAAACCCGAAGATGGTTGGAGGTCG
TTTATTCCTCAACGCAACGTCAGGAACACATGTTTATTATGATAAGGAGA
CACATGCAGGAGAGTCTTTATTTTACCGATTGGTGGCTAGAGACACTGGT
CTTCCGTCTGCCGCACCTCTCTTGAAGTCTTATGCGAAGGTTGAGACTGT
GACAATTGCAGAGCTTAACCATTTTATCACTACGGATTCGCCACAGGCTG
AAGAAGGAGTGAACCCTGAGGATTCCGTGATGCCTCCGTTCGTTGCAGGA
ATGGAACGCAAGACCTACACTTTCCAAGTCCGTGTCACGCCCTACAACTT
CACCGTCAACCACCAGACGTTCACCGTGTCGCGTATCATCAATGAGGTTG
AGCGTGCACCAGCTCCAGAATTTGTCGATGATGAAGGTGATGACAATGAT
GATGATGATGCGCCAGACGGGCCTAACAACCGTGTGGAGTCTGGTTCCGG
CAAGGGCAATTGTGAGACATCAAAGAGAGCTGGAAAGGAGCCAGTCGGTA
ATGTGCGTAAGAGGGCGCGTATTGCTTAA back to topprotein sequence of A01p05990.1_BnaDARv10-RA >A01p05990.1_BnaDARv10-PA ID=A01p05990.1_BnaDARv10-PA|Name=A01p05990.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=293bp
CLFRESSSRPEVRQMLLRRRGPASTVREARNVNALSDLNIEPVDIIGEIV
AVKSTVSDPPEDKNRVMVTVKLENDVSVTLSLFDAQAVLFHQKLGGMRDD
PKVIVATSINPKMVGGRLFLNATSGTHVYYDKETHAGESLFYRLVARDTG
LPSAAPLLKSYAKVETVTIAELNHFITTDSPQAEEGVNPEDSVMPPFVAG
MERKTYTFQVRVTPYNFTVNHQTFTVSRIINEVERAPAPEFVDDEGDDND
DDDAPDGPNNRVESGSGKGNCETSKRAGKEPVGNVRKRARIA. back to topmRNA from alignment at A01_BnaDARv10:2714362..2716520+ Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >A01p05990.1_BnaDARv10-RA ID=A01p05990.1_BnaDARv10-RA|Name=A01p05990.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=2159bp|location=Sequence derived from alignment at A01_BnaDARv10:2714362..2716520+ (Brassica napus)
TGTCTATTTCGAGAGTCTTCTTCTCGACCTGAAGTCCGGCAAATGCTCCT
CCGTCGTCGAGGCCCGGCTTCTACGGTTCGGGAGGCGAGGAACGTAAACG
CGGTGGCGAGCTGATGTGGGTCGATATGCTACTTATGGACGTGAATGTAA
GTTTGATTCTTCCCGGTCTCCTTAGATCATTTTACGTTATTTTTCGACTT
CTAAATTTTATCGGTTTGATCGACTTTGATCCAAGCTACTATCAACGCGA
ATCGGCTTCCAAGGTTCCGAGATAGGCTCGCCGCCGGGACGATGTACTCT
GTTTCTGGCTTTGACGTGGCTCGCTGTGCTCAGAACTTCAAGCTTGCAGA
CTCTTCTTTTTTGACGTGTTATCTGATCCGGTCTCGCCAATACCGGCAGA
GGGATTCCGGTTCCGTAACCAGACCGAGTTGGTTGGTTTAGCCAATACAA
ACACTCAGCTTCCAGGTACAGATGTGATCGTATCGTACATATGTATATTT
ATCTGTATGGGTTTTGTGCTTTATGTATTAAGTCACTGAGCTCTCTGATC
TCAATATTGAACCTGTAGATATTATTGGTGAAATCGTGGCGGTGAAGAGC
ACCGTGTCTGACCCTCCGGAGGATAAGAACCGTGTCATGGTCACCGTCAA
ATTAGAAAAGTAATTTATTTGTTTCTTTAACAACTTTCATATTTGCTTAA
TCATTTTAGCTGCACTAACGTTTGTTATATATGTGCAGTGATGTGTCTGT
CACTCTTAGTCTGTTTGACGCTCAAGCCGTTTTATTCCACCAGAAGCTTG
GAGGCATGCGTGATGATCCTAAAGTGATTGTTGCCACAAGCATAAACCCG
AAGATGGTTGGAGGTACTTCGTTGCTTATTTAAAGATGTGGCATAAATTA
ATATGTGTAATTCCTTTTTCAGAAATTTTTACTATTTTGTGTAGGTCGTT
TATTCCTCAACGCAACGTCAGGAACACATGTTTATTATGATAAGGAGACA
CATGCAGGAGAGTCTTTATTTTACCGGTAAGTTTGGTCTGTTCTGAGTAT
GTAATCAGACGTTGAGAGTTTGTGATGTTAATTTCGTGAACTTTTGTTCA
GATTGGTGGCTAGAGACACTGGTCTTCCGTCTGCCGCACCTCTCTTGAAG
TCTTATGCGAAGGTTGAGACTGTGACAATTGCAGAGCTTAACCATTTTAT
CACTACGGATTCGCCACAGGTAATGAGTTATGTATATGCAATTAGCTCAT
TCGTGTGTTTATATATAAAGATTGTTTTTTTGACTGCACGCAATGTTGAT
GTTTAAGCAGCAGGAAATAGATTTCTTATGCACTGCGAGAGTTTCTCGGG
TTGAATCGGACAAAGGGTGGTGCTATGTTGCGTGTTCTAAGTGCAGCAAG
AAATTGCAACGCACTGTCACTTCTTTCGAATGTGCACGCTGTAATAACCC
TCATGCGGTCGGATCTTTACGGTATGTATCGATTTGTTATAATATGATAG
TTGGTCGCCTTCTTTATCCCTTGCGTCACACTGATTCCATTTCGGTTTAT
TTGTTCTCTTTTAGTTATCGCGTTGAGATGGTTGTAACTGATGATACTGC
TGAAGGGACATTTGTTTGCTTTGATGGTGTTATGGACGAAGTTGCATAAT
CTCCGGGCAAGTGAGGCGGTCCAGTTACTGGTAATATATAGTTTGATTAC
TTATGTGGTTATTATATAATGTTGTTGATACTCTCGATGCTTCCATTTAA
TGACAAGGCTGAAGAAGGAGTGAACCCTGAGGATTCCGTGATGCCTCCGT
TCGTTGCAGGAATGGAACGCAAGACCTACACTTTCCAAGTCCGTGTCACG
CCCTACAACTTCACCGTCAACCACCAGACGTTCACCGTGTCGCGTATCAT
CAATGAGGTTGAGCGTGCACCAGCTCCAGAATTTGTCGATGATGTAAGTG
CAATACTTATTATGATATTTCGCCATTAGCATATGCAGCGTATAACAATT
TGAATGTAACAGGAAGGTGATGACAATGATGATGATGATGCGCCAGACGG
GCCTAACAACCGTGTGGAGTCTGGTTCCGGCAAGGGCAATTGTGAGACAT
CAAAGAGAGCTGGAAAGGAGCCAGTCGGTAATGTGCGTAAGAGGGCGCGT
ATTGCTTAA back to topCoding sequence (CDS) from alignment at A01_BnaDARv10:2714362..2716520+ >A01p05990.1_BnaDARv10-RA ID=A01p05990.1_BnaDARv10-RA|Name=A01p05990.1_BnaDARv10-RA|organism=Brassica napus|type=CDS|length=879bp|location=Sequence derived from alignment at A01_BnaDARv10:2714362..2716520+ (Brassica napus)
TGTCTATTTCGAGAGTCTTCTTCTCGACCTGAAGTCCGGCAAATGCTCCT
CCGTCGTCGAGGCCCGGCTTCTACGGTTCGGGAGGCGAGGAACGTAAACG
CGCTCTCTGATCTCAATATTGAACCTGTAGATATTATTGGTGAAATCGTG
GCGGTGAAGAGCACCGTGTCTGACCCTCCGGAGGATAAGAACCGTGTCAT
GGTCACCGTCAAATTAGAAAATGATGTGTCTGTCACTCTTAGTCTGTTTG
ACGCTCAAGCCGTTTTATTCCACCAGAAGCTTGGAGGCATGCGTGATGAT
CCTAAAGTGATTGTTGCCACAAGCATAAACCCGAAGATGGTTGGAGGTCG
TTTATTCCTCAACGCAACGTCAGGAACACATGTTTATTATGATAAGGAGA
CACATGCAGGAGAGTCTTTATTTTACCGATTGGTGGCTAGAGACACTGGT
CTTCCGTCTGCCGCACCTCTCTTGAAGTCTTATGCGAAGGTTGAGACTGT
GACAATTGCAGAGCTTAACCATTTTATCACTACGGATTCGCCACAGGCTG
AAGAAGGAGTGAACCCTGAGGATTCCGTGATGCCTCCGTTCGTTGCAGGA
ATGGAACGCAAGACCTACACTTTCCAAGTCCGTGTCACGCCCTACAACTT
CACCGTCAACCACCAGACGTTCACCGTGTCGCGTATCATCAATGAGGTTG
AGCGTGCACCAGCTCCAGAATTTGTCGATGATGAAGGTGATGACAATGAT
GATGATGATGCGCCAGACGGGCCTAACAACCGTGTGGAGTCTGGTTCCGG
CAAGGGCAATTGTGAGACATCAAAGAGAGCTGGAAAGGAGCCAGTCGGTA
ATGTGCGTAAGAGGGCGCGTATTGCTTAA back to top
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