Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2241 |
| Exons | 2 |
| Cds size | 2241 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p04220.1_BnaDARv10 | A01p04220.1_BnaDARv10 | Brassica napus | gene | A01_BnaDARv10 1953787..1956170 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1626340473.9766784-CDS-A01_BnaDARv10:1953786..1955464 | 1626340473.9766784-CDS-A01_BnaDARv10:1953786..1955464 | Brassica napus | CDS | A01_BnaDARv10 1953787..1955464 + |
| 1626340473.9852498-CDS-A01_BnaDARv10:1955607..1956170 | 1626340473.9852498-CDS-A01_BnaDARv10:1955607..1956170 | Brassica napus | CDS | A01_BnaDARv10 1955608..1956170 + |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p04220.1_BnaDARv10_exon1 | A01p04220.1_BnaDARv10_exon1 | Brassica napus | exon | A01_BnaDARv10 1953787..1955464 + |
| A01p04220.1_BnaDARv10_exon2 | A01p04220.1_BnaDARv10_exon2 | Brassica napus | exon | A01_BnaDARv10 1955608..1956170 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >A01p04220.1_BnaDARv10-RA ID=A01p04220.1_BnaDARv10-RA|Name=A01p04220.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=2241bp|location=Sequence derived from alignment at A01_BnaDARv10:1953787..1956170+ (Brassica napus)|Notes=Excludes all bases but those of type(s): exon.
ATGACTTTCAACCTAAGCAACCTCTTCTCATTATTCCTTCTCCACCTTCT
AGTCCCCACACAAGTCCAAGCTCTTAACGCTGATGGTGTTCTTCTGCTAT
CTTTCAAATACTCTATCCTCAGTGACCCTCTCTCCGTTCTACGCAACTGG
AACTATGACGATAAAACACCATGCTTGTGGACAGGTGTCACATGCACAGA
GCTTGGGAAGCCCAGAACACCAGACATGTTCAGAGTCACAAGCTTGGTAC
TTCCCAACAAACACCTTCTTGGCTCCATCGCTCCGGACTTGTTCTTCATT
CCGCATCTAAGGATCTTGGATCTATCCAGCAACTTCTTCAACGGGTCACT
CCCGGACTCGGTCTTCAATGCTACTGAGCTTAGTGTTATCTCCCTTGGAA
GCAACAATCTCTCTGGTGATTTGCCTACGAGTATCAGCAGTGACACAAAC
CTCCAGCTCTTGAACCTCTCAGCTAACGCATTTACAGGAAAAATACCGCT
CAGCCTCTCACTTCTGAAGAATTTAACGGCCGTTTCCTTGTCAAAGAACT
CCTTCTCAGGTGACATTCCAGGTGGTTTCGAAGCAGTAGAGGTTCTTGAC
CTCTCTTCAAACCTTCTGAACGGCTCTCTTCCTCAGAACTTGGGAGGGAG
AAGCCTGCATTACTTGAGCTTATCACACAACAAACTCTCCGGCGAGATTC
CTCCAGGGTTTGCAGCAAAGTTTCCAGGAAACGCTACAGTCGATCTCTCC
TTCAACAACCTAACAGGCCCAATCCCAACCTCCCTCTCTCTACTCAACCA
AAAGGCTGAGGCTTTCTCCAGTAATCCAGAGCTGTGTGGGAAGCCGTTGA
AGACCCTTTGTTCAATACCTTCCACTCTCTCAAACCCTCCAAACATACCT
GAAAACACTTCCCCGGCTATAGCTGTCAAGCCAAGAAGCTCAGCTCCTCC
AACAAACTCTTCAACAGAGTCACCAAACCAAACGGTGAAAAGCAAGCTGA
AGCCAAGCACCATCGCCGGAATCATTGTTGCGGACATAGTTGGTCTAGCT
ATCATAGGCCTCTTCGTGCTCTACGTTTACCAAGTCAGGAAACGAAGAAG
GTCCCCAGAGTCCACCACGTTCAGCCTCTTCACAATCTGCCTTGACAAAA
ACGAAGCCAAGAAATCAAAACCAAGCTTCGTCGTTGAGGTCAACGTCACT
GAATCACCAGACGCTAAAACGTCTTGCGGCTCGTGCATCAACGGAGGAAG
GTACGACGAGACGTCGACGTCAGAGAGCGACGTAGAGAACAACCAGCAAA
CGGTTCAGGCATTTGATCGAACAGATGGGGGGCGATTGAAACAGAACGCT
CAGACTAAACTAATCACAGTCGACGGAGAGACTCGTTTGGATTTGGACAC
GCTACTAAAGGCCTCAGCTTACGTATTGGGAACCAACGTGACTAGAATCG
TGTACAAGGCGGTTCTTGAAAACGGCACGGCGTTCGCGGTGCGGCGGATA
GAAACGGAGAGCTGTGCGACGACGAAAGTTAAGGACTTTGAGCGGGAGGT
TCGCGCTATAGCTAAGATTCGACACCCGAATCTCGTCAGGCTTCGTGGGT
TCTGCTGGGGAAACGACGAGAAGCTTCTCATCTCCGACTATGTTCCCAAT
GGCAGCCTCCTTGGCTCCTTCGCCGCAACAAAGACAAGCGCAAGCTCGTC
TACACCAACTATGCAACACCCACTTTCTTTCGAGGCGCGGCTCAAGATAG
CTAAAGGAATGGCGCGGGGACTATCTTACATCAACGAGAAGAAACACGTG
CACGGTAACATCAAGCCCAATAACATTCTCTTAAACTCTGAGAATGAGCC
CATCATCACCGATCTGGGCCTAGACCGTCTCATGACACCAACGTCGAGCT
CACCGTGCTACCAGCCACCGGAACGGTGTACAAGCGAGAAACCGAACCCT
AAGTGGGACGTTTATTCCTTCGGCGTCATTCTATTAGAACTTCTCACAGG
CAAAACCTTTTCGGTCGATCAGGATGTAGATCAGTGGTCAGAGTTACTAG
ACGGTTCTGAAGCGGAAGAGAAAGGCCGGTTCTTGAGGTTAGTCGACGGT
GCAATAAGAAGCGATGTGGCTCGGCATGAGGATGCTGCGATGGTGTGCTT
CAGGTTAGGGATTGAATGTGTCTCTTCCTTGCCTCAGAAGCGACCGTCAA
TGAAGGAAGTAGTGCAAGCGTTGGAGAAAGTGAGTGTTTAG back to topprotein sequence of A01p04220.1_BnaDARv10-RA >A01p04220.1_BnaDARv10-PA ID=A01p04220.1_BnaDARv10-PA|Name=A01p04220.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=747bp
MTFNLSNLFSLFLLHLLVPTQVQALNADGVLLLSFKYSILSDPLSVLRNW
NYDDKTPCLWTGVTCTELGKPRTPDMFRVTSLVLPNKHLLGSIAPDLFFI
PHLRILDLSSNFFNGSLPDSVFNATELSVISLGSNNLSGDLPTSISSDTN
LQLLNLSANAFTGKIPLSLSLLKNLTAVSLSKNSFSGDIPGGFEAVEVLD
LSSNLLNGSLPQNLGGRSLHYLSLSHNKLSGEIPPGFAAKFPGNATVDLS
FNNLTGPIPTSLSLLNQKAEAFSSNPELCGKPLKTLCSIPSTLSNPPNIP
ENTSPAIAVKPRSSAPPTNSSTESPNQTVKSKLKPSTIAGIIVADIVGLA
IIGLFVLYVYQVRKRRRSPESTTFSLFTICLDKNEAKKSKPSFVVEVNVT
ESPDAKTSCGSCINGGRYDETSTSESDVENNQQTVQAFDRTDGGRLKQNA
QTKLITVDGETRLDLDTLLKASAYVLGTNVTRIVYKAVLENGTAFAVRRI
ETESCATTKVKDFEREVRAIAKIRHPNLVRLRGFCWGNDEKLLISDYVPN
GSLLGSFAATKTSASSSTPTMQHPLSFEARLKIAKGMARGLSYINEKKHV
HGNIKPNNILLNSENEPIITDLGLDRLMTPTSSSPCYQPPERCTSEKPNP
KWDVYSFGVILLELLTGKTFSVDQDVDQWSELLDGSEAEEKGRFLRLVDG
AIRSDVARHEDAAMVCFRLGIECVSSLPQKRPSMKEVVQALEKVSV. back to topmRNA from alignment at A01_BnaDARv10:1953787..1956170+ Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >A01p04220.1_BnaDARv10-RA ID=A01p04220.1_BnaDARv10-RA|Name=A01p04220.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=2384bp|location=Sequence derived from alignment at A01_BnaDARv10:1953787..1956170+ (Brassica napus)
ATGACTTTCAACCTAAGCAACCTCTTCTCATTATTCCTTCTCCACCTTCT
AGTCCCCACACAAGTCCAAGCTCTTAACGCTGATGGTGTTCTTCTGCTAT
CTTTCAAATACTCTATCCTCAGTGACCCTCTCTCCGTTCTACGCAACTGG
AACTATGACGATAAAACACCATGCTTGTGGACAGGTGTCACATGCACAGA
GCTTGGGAAGCCCAGAACACCAGACATGTTCAGAGTCACAAGCTTGGTAC
TTCCCAACAAACACCTTCTTGGCTCCATCGCTCCGGACTTGTTCTTCATT
CCGCATCTAAGGATCTTGGATCTATCCAGCAACTTCTTCAACGGGTCACT
CCCGGACTCGGTCTTCAATGCTACTGAGCTTAGTGTTATCTCCCTTGGAA
GCAACAATCTCTCTGGTGATTTGCCTACGAGTATCAGCAGTGACACAAAC
CTCCAGCTCTTGAACCTCTCAGCTAACGCATTTACAGGAAAAATACCGCT
CAGCCTCTCACTTCTGAAGAATTTAACGGCCGTTTCCTTGTCAAAGAACT
CCTTCTCAGGTGACATTCCAGGTGGTTTCGAAGCAGTAGAGGTTCTTGAC
CTCTCTTCAAACCTTCTGAACGGCTCTCTTCCTCAGAACTTGGGAGGGAG
AAGCCTGCATTACTTGAGCTTATCACACAACAAACTCTCCGGCGAGATTC
CTCCAGGGTTTGCAGCAAAGTTTCCAGGAAACGCTACAGTCGATCTCTCC
TTCAACAACCTAACAGGCCCAATCCCAACCTCCCTCTCTCTACTCAACCA
AAAGGCTGAGGCTTTCTCCAGTAATCCAGAGCTGTGTGGGAAGCCGTTGA
AGACCCTTTGTTCAATACCTTCCACTCTCTCAAACCCTCCAAACATACCT
GAAAACACTTCCCCGGCTATAGCTGTCAAGCCAAGAAGCTCAGCTCCTCC
AACAAACTCTTCAACAGAGTCACCAAACCAAACGGTGAAAAGCAAGCTGA
AGCCAAGCACCATCGCCGGAATCATTGTTGCGGACATAGTTGGTCTAGCT
ATCATAGGCCTCTTCGTGCTCTACGTTTACCAAGTCAGGAAACGAAGAAG
GTCCCCAGAGTCCACCACGTTCAGCCTCTTCACAATCTGCCTTGACAAAA
ACGAAGCCAAGAAATCAAAACCAAGCTTCGTCGTTGAGGTCAACGTCACT
GAATCACCAGACGCTAAAACGTCTTGCGGCTCGTGCATCAACGGAGGAAG
GTACGACGAGACGTCGACGTCAGAGAGCGACGTAGAGAACAACCAGCAAA
CGGTTCAGGCATTTGATCGAACAGATGGGGGGCGATTGAAACAGAACGCT
CAGACTAAACTAATCACAGTCGACGGAGAGACTCGTTTGGATTTGGACAC
GCTACTAAAGGCCTCAGCTTACGTATTGGGAACCAACGTGACTAGAATCG
TGTACAAGGCGGTTCTTGAAAACGGCACGGCGTTCGCGGTGCGGCGGATA
GAAACGGAGAGCTGTGCGACGACGAAAGTTAAGGACTTTGAGCGGGAGGT
TCGCGCTATAGCTAAGATTCGACACCCGAATCTCGTCAGGCTTCGTGGGT
TCTGCTGGGGAAACGACGAGAAGCTTCTCATCTCCGACTATGTTCCCAAT
GGCAGCCTCCTTGGCTCCTTCGCCGCAAGTAAGTTCCTCTGTTTCCTCTG
TTTACTCTGTTTCATTTGGCGCACGAACTAAAATGCGCCTATCACTTATG
CGCAGTTTAGCACATTAAAATACGCACGTCACTCTATTTTTTTAAAACTC
CTTTTGTTTCTTTACAAACAGCAAAGACAAGCGCAAGCTCGTCTACACCA
ACTATGCAACACCCACTTTCTTTCGAGGCGCGGCTCAAGATAGCTAAAGG
AATGGCGCGGGGACTATCTTACATCAACGAGAAGAAACACGTGCACGGTA
ACATCAAGCCCAATAACATTCTCTTAAACTCTGAGAATGAGCCCATCATC
ACCGATCTGGGCCTAGACCGTCTCATGACACCAACGTCGAGCTCACCGTG
CTACCAGCCACCGGAACGGTGTACAAGCGAGAAACCGAACCCTAAGTGGG
ACGTTTATTCCTTCGGCGTCATTCTATTAGAACTTCTCACAGGCAAAACC
TTTTCGGTCGATCAGGATGTAGATCAGTGGTCAGAGTTACTAGACGGTTC
TGAAGCGGAAGAGAAAGGCCGGTTCTTGAGGTTAGTCGACGGTGCAATAA
GAAGCGATGTGGCTCGGCATGAGGATGCTGCGATGGTGTGCTTCAGGTTA
GGGATTGAATGTGTCTCTTCCTTGCCTCAGAAGCGACCGTCAATGAAGGA
AGTAGTGCAAGCGTTGGAGAAAGTGAGTGTTTAG back to topCoding sequence (CDS) from alignment at A01_BnaDARv10:1953787..1956170+ >A01p04220.1_BnaDARv10-RA ID=A01p04220.1_BnaDARv10-RA|Name=A01p04220.1_BnaDARv10-RA|organism=Brassica napus|type=CDS|length=2241bp|location=Sequence derived from alignment at A01_BnaDARv10:1953787..1956170+ (Brassica napus)
ATGACTTTCAACCTAAGCAACCTCTTCTCATTATTCCTTCTCCACCTTCT
AGTCCCCACACAAGTCCAAGCTCTTAACGCTGATGGTGTTCTTCTGCTAT
CTTTCAAATACTCTATCCTCAGTGACCCTCTCTCCGTTCTACGCAACTGG
AACTATGACGATAAAACACCATGCTTGTGGACAGGTGTCACATGCACAGA
GCTTGGGAAGCCCAGAACACCAGACATGTTCAGAGTCACAAGCTTGGTAC
TTCCCAACAAACACCTTCTTGGCTCCATCGCTCCGGACTTGTTCTTCATT
CCGCATCTAAGGATCTTGGATCTATCCAGCAACTTCTTCAACGGGTCACT
CCCGGACTCGGTCTTCAATGCTACTGAGCTTAGTGTTATCTCCCTTGGAA
GCAACAATCTCTCTGGTGATTTGCCTACGAGTATCAGCAGTGACACAAAC
CTCCAGCTCTTGAACCTCTCAGCTAACGCATTTACAGGAAAAATACCGCT
CAGCCTCTCACTTCTGAAGAATTTAACGGCCGTTTCCTTGTCAAAGAACT
CCTTCTCAGGTGACATTCCAGGTGGTTTCGAAGCAGTAGAGGTTCTTGAC
CTCTCTTCAAACCTTCTGAACGGCTCTCTTCCTCAGAACTTGGGAGGGAG
AAGCCTGCATTACTTGAGCTTATCACACAACAAACTCTCCGGCGAGATTC
CTCCAGGGTTTGCAGCAAAGTTTCCAGGAAACGCTACAGTCGATCTCTCC
TTCAACAACCTAACAGGCCCAATCCCAACCTCCCTCTCTCTACTCAACCA
AAAGGCTGAGGCTTTCTCCAGTAATCCAGAGCTGTGTGGGAAGCCGTTGA
AGACCCTTTGTTCAATACCTTCCACTCTCTCAAACCCTCCAAACATACCT
GAAAACACTTCCCCGGCTATAGCTGTCAAGCCAAGAAGCTCAGCTCCTCC
AACAAACTCTTCAACAGAGTCACCAAACCAAACGGTGAAAAGCAAGCTGA
AGCCAAGCACCATCGCCGGAATCATTGTTGCGGACATAGTTGGTCTAGCT
ATCATAGGCCTCTTCGTGCTCTACGTTTACCAAGTCAGGAAACGAAGAAG
GTCCCCAGAGTCCACCACGTTCAGCCTCTTCACAATCTGCCTTGACAAAA
ACGAAGCCAAGAAATCAAAACCAAGCTTCGTCGTTGAGGTCAACGTCACT
GAATCACCAGACGCTAAAACGTCTTGCGGCTCGTGCATCAACGGAGGAAG
GTACGACGAGACGTCGACGTCAGAGAGCGACGTAGAGAACAACCAGCAAA
CGGTTCAGGCATTTGATCGAACAGATGGGGGGCGATTGAAACAGAACGCT
CAGACTAAACTAATCACAGTCGACGGAGAGACTCGTTTGGATTTGGACAC
GCTACTAAAGGCCTCAGCTTACGTATTGGGAACCAACGTGACTAGAATCG
TGTACAAGGCGGTTCTTGAAAACGGCACGGCGTTCGCGGTGCGGCGGATA
GAAACGGAGAGCTGTGCGACGACGAAAGTTAAGGACTTTGAGCGGGAGGT
TCGCGCTATAGCTAAGATTCGACACCCGAATCTCGTCAGGCTTCGTGGGT
TCTGCTGGGGAAACGACGAGAAGCTTCTCATCTCCGACTATGTTCCCAAT
GGCAGCCTCCTTGGCTCCTTCGCCGCAACAAAGACAAGCGCAAGCTCGTC
TACACCAACTATGCAACACCCACTTTCTTTCGAGGCGCGGCTCAAGATAG
CTAAAGGAATGGCGCGGGGACTATCTTACATCAACGAGAAGAAACACGTG
CACGGTAACATCAAGCCCAATAACATTCTCTTAAACTCTGAGAATGAGCC
CATCATCACCGATCTGGGCCTAGACCGTCTCATGACACCAACGTCGAGCT
CACCGTGCTACCAGCCACCGGAACGGTGTACAAGCGAGAAACCGAACCCT
AAGTGGGACGTTTATTCCTTCGGCGTCATTCTATTAGAACTTCTCACAGG
CAAAACCTTTTCGGTCGATCAGGATGTAGATCAGTGGTCAGAGTTACTAG
ACGGTTCTGAAGCGGAAGAGAAAGGCCGGTTCTTGAGGTTAGTCGACGGT
GCAATAAGAAGCGATGTGGCTCGGCATGAGGATGCTGCGATGGTGTGCTT
CAGGTTAGGGATTGAATGTGTCTCTTCCTTGCCTCAGAAGCGACCGTCAA
TGAAGGAAGTAGTGCAAGCGTTGGAGAAAGTGAGTGTTTAG back to top
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