RXN-20622

From Aureme Brassica napus

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Contents

1 Reaction RXN-20622
2 Reaction formula
3 Gene(s) associated with this reaction
4 Pathway(s)
5 Reconstruction information
6 External links

Reaction RXN-20622

direction:
- left-to-right
common-name:
- histone demethylase activity (h3-trimethyl-k4 specific)

Reaction formula

1 2-KETOGLUTARATE[c] + 1 Histone-H3-K4m3[c] + 1 OXYGEN-MOLECULE[c] => 1 CARBON-DIOXIDE[c] + 1 FORMALDEHYDE[c] + 1 Histone-H3-K4m2[c] + 1 SUC[c]

Gene(s) associated with this reaction

Gene: BnaC04g06460D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaCnng10240D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaC05g23780D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaC05g06250D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaAnng23840D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaAnng07270D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaC08g13640D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaA06g04990D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaC07g15360D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaA05g06190D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaC07g19700D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaC09g19820D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaA10g25980D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaA09g25710D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaA08g26850D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
Gene: BnaA08g05240D
- Category: annotation
  - Source: genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a

Pathway(s)

Reconstruction information

category: annotation; source: genome; tool: pathwaytools; comment: n.a

External links

Retrieved from "https://bbip.genouest.org/sp/brassica_napus/aureme/index.php?title=RXN-20622&oldid=32116"

Reaction