https://bbip.genouest.org/index.php?feed=atom&namespace=0&title=Special%3ANewPages Aureme Brassica napus - New pages [en] 2026-05-02T12:34:17Z From Aureme Brassica napus MediaWiki 1.28.1 https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/Pathwaytools Pathwaytools 2020-10-09T11:08:29Z <p>Admin: Created page with &quot;{{#ask: Category:reaction reconstruction tool::pathwaytools | ?common-name | ?ec-number | ?reconstruction category | ?reconstruction source | ?reconstruction comment |...&quot;</p> <hr /> <div>{{#ask: [[Category:reaction]] [[reconstruction tool::pathwaytools]]<br /> | ?common-name<br /> | ?ec-number<br /> | ?reconstruction category<br /> | ?reconstruction source<br /> | ?reconstruction comment<br /> | ?nb gene associated<br /> | ?nb pathway associated<br /> }}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/Workflow Workflow 2020-10-09T11:08:29Z <p>Admin: Created page with &quot;=Workflow command history= ==Command sequence== ==Downloads== You can download the command log file here&quot;</p> <hr /> <div>=Workflow command history=<br /> <br /> ==Command sequence==<br /> ==Downloads==<br /> You can download the [[MEDIA:log.txt|command log file here]]</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/Annotation Annotation 2020-10-09T11:08:29Z <p>Admin: Created page with &quot;{{#ask: Category:reaction reconstruction category::annotation | ?common-name | ?ec-number | ?reconstruction tool | ?reconstruction source | ?reconstruction comment | ?...&quot;</p> <hr /> <div>{{#ask: [[Category:reaction]] [[reconstruction category::annotation]]<br /> | ?common-name<br /> | ?ec-number<br /> | ?reconstruction tool<br /> | ?reconstruction source<br /> | ?reconstruction comment<br /> | ?nb gene associated<br /> | ?nb pathway associated<br /> }}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 2020-10-09T11:08:27Z <p>Admin: Created page with &quot;Category:reaction == Reaction 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.35 ec-3.1.4.35] * direction: ** left-to-right * com...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.1.4.35 ec-3.1.4.35]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CGMP]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaA10g17450D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * METANETX-RXN : MNXR100078<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16958 16958]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R01234 R01234]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/P04972 P04972]<br /> ** [http://www.uniprot.org/uniprot/P16586 P16586]<br /> ** [http://www.uniprot.org/uniprot/P23439 P23439]<br /> ** [http://www.uniprot.org/uniprot/P35913 P35913]<br /> ** [http://www.uniprot.org/uniprot/P33726 P33726]<br /> ** [http://www.uniprot.org/uniprot/P09174 P09174]<br /> ** [http://www.uniprot.org/uniprot/P52731 P52731]<br /> ** [http://www.uniprot.org/uniprot/P51160 P51160]<br /> ** [http://www.uniprot.org/uniprot/P18545 P18545]<br /> ** [http://www.uniprot.org/uniprot/O76074 O76074]<br /> ** [http://www.uniprot.org/uniprot/P11541 P11541]<br /> ** [http://www.uniprot.org/uniprot/P27664 P27664]<br /> ** [http://www.uniprot.org/uniprot/Q62037 Q62037]<br /> ** [http://www.uniprot.org/uniprot/P23440 P23440]<br /> &lt;/div&gt;<br /> {{#set: ec-number=ec-3.1.4.35}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=1}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN1ZN3-9 RXN1ZN3-9 2020-10-09T11:08:26Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN1ZN3-9 == * direction: ** left-to-right * common-name: ** nil == Reaction formula == * 1 CARBON-DIOXIDE[c] '''+''' 1 DIAMINONONANOAT...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN1ZN3-9 ==<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DIAMINONONANOATE]][c] '''=&gt;''' 1 [[CPD1ZN3-1]][c] '''+''' 2 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC01g43270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g10210D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g11520D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g12880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g32740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g05970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng68410D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng70850D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=8}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/SEDOHEPTULOSE-BISPHOSPHATASE-RXN SEDOHEPTULOSE-BISPHOSPHATASE-RXN 2020-10-09T11:08:26Z <p>Admin: Created page with &quot;Category:reaction == Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.37 ec-3.1.3.37] * direction: ** left-to-right * common...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.1.3.37 ec-3.1.3.37]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[D-SEDOHEPTULOSE-1-7-P2]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[Pi]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC08g26740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g35380D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g25260D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g42620D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g42630D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g16660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA04g03360D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:<br /> ** '''13''' reactions found over '''13''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR104279<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17462 17462]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R01845 R01845]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/P23014 P23014]<br /> ** [http://www.uniprot.org/uniprot/P46285 P46285]<br /> ** [http://www.uniprot.org/uniprot/P46283 P46283]<br /> ** [http://www.uniprot.org/uniprot/P46284 P46284]<br /> ** [http://www.uniprot.org/uniprot/O23780 O23780]<br /> ** [http://www.uniprot.org/uniprot/O20252 O20252]<br /> {{#set: ec-number=ec-3.1.3.37}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=7}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-18703 RXN-18703 2020-10-09T11:08:26Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-18703 == * direction: ** left-to-right * common-name: ** nil == Reaction formula == * 1 Red-Thioredoxin[c] '''+''' 1 TUM1-S-sulfany...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-18703 ==<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[Red-Thioredoxin]][c] '''+''' 1 [[TUM1-S-sulfanylcysteine]][c] '''=&gt;''' 1 [[HS]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[TUM1-L-cysteine]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC06g39640D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g25610D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g19200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g11040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g20420D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g12550D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g34750D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g19960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=8}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/ATPSYN-RXN ATPSYN-RXN 2020-10-09T11:08:26Z <p>Admin: Created page with &quot;Category:reaction == Reaction ATPSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/7.1.2.2 ec-7.1.2.2] * direction: ** reversible * common-name: ** nil ** proton-tra...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction ATPSYN-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/7.1.2.2 ec-7.1.2.2]<br /> * direction:<br /> ** reversible<br /> * common-name:<br /> ** nil<br /> ** proton-transporting atp synthase activity, rotational mechanism<br /> ** proton-transporting atpase activity, rotational mechanism<br /> == Reaction formula ==<br /> * 1 [[ATP]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''&lt;=&gt;''' 1 [[ADP]][c] '''+''' 4 [[PROTON]][e] '''+''' 1 [[Pi]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC06g39330D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g41980D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC03g41990D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g36110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA07g38430D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g03730D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g04740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA01g04510D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA01g02950D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaCnng48510D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g32170D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g48790D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC02g27830D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC02g27850D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC08g16740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g21820D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA02g24900D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA07g10310D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g00050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA02g21070D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g36100D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g20310D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA02g29360D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g32110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g28140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC04g28290D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g04340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng22330D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC04g33510D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC04g03010D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng05660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaCnng53190D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g34180D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaCnng48500D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaCnng51300D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g02630D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g02620D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng57990D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaCnng12660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC04g20360D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA01g34200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC01g27960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g07360D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g47900D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g52040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g52110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g27500D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g50930D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA05g15290D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g15140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g01030D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g01040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g24530D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g27590D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng12620D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng12600D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g46640D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC05g09300D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC07g25260D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g26090D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g22670D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g40150D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC07g37050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC03g60340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC03g67270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC03g18230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC03g18340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA04g12160D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g24090D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g32500D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaAnng39740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaAnng40960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaAnng07210D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaAnng08050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC02g40090D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC02g26080D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC02g08480D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g17340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC02g33050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g25660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng66500D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g37030D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC06g37040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA03g49560D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA07g07220D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA07g07230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC02g04760D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g21410D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC08g09490D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC08g12140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA10g05490D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g25530D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC04g43510D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g35640D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC08g35720D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA06g07880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC04g11660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g44770D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC04g03000D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g33890D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC07g01020D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC07g41970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC07g08820D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA02g01640D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g19840D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA01g34290D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g34170D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g34190D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g22780D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g22770D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g19900D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g29960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g30820D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g25280D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g01810D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g19920D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC03g41970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g22690D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA06g09670D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g06270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC01g05990D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC01g04210D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC01g18310D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC03g77060D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC03g72900D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC02g47420D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC03g18200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g53370D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g02330D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g12020D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g12010D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC03g28690D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g43200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g12160D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g20350D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g25960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g22030D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA08g24550D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA08g12170D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA08g13400D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA08g14410D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA08g05260D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA08g11340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g12320D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g12310D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g12120D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g12110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g20320D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g05880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g23090D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g03720D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g43620D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g33770D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g00070D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g11050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g47330D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g47340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g09030D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA04g19150D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g37420D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC02g28880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC02g27060D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g00960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g26970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC01g27040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC01g27050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g14480D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g17890D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g23590D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA07g34490D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g01880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g43480D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g20290D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g37960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g23770D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g16530D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g08900D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g13560D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g25540D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng06000D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng05990D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g10580D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-7980]], ATP biosynthesis:<br /> ** '''1''' reactions found over '''1''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR96136<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20855 20855]<br /> {{#set: ec-number=ec-7.1.2.2}}<br /> {{#set: direction=reversible}}<br /> {{#set: common-name=proton-transporting atpase activity, rotational mechanism|nil|proton-transporting atp synthase activity, rotational mechanism}}<br /> {{#set: nb gene associated=182}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/3.2.1.84-RXN 3.2.1.84-RXN 2020-10-09T11:08:26Z <p>Admin: Created page with &quot;Category:reaction == Reaction 3.2.1.84-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.84 ec-3.2.1.84] * direction: ** left-to-right * common-name: ** nil == Rea...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction 3.2.1.84-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.2.1.84 ec-3.2.1.84]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[1-3-alpha-D-Glucans]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[1-3-alpha-D-Glucans]][c] '''+''' 1 [[Glucopyranose]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC09g06110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g06100D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g22950D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g22960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g52360D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g52350D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g50510D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g50520D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> {{#set: ec-number=ec-3.2.1.84}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=8}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-11592 RXN-11592 2020-10-09T11:08:26Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-11592 == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.177 ec-2.1.1.177] * direction: ** left-to-right * common-name: ** nil == Reac...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-11592 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.1.1.177 ec-2.1.1.177]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[23S-rRNA-pseudouridine1915]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=&gt;''' 1 [[23S-rRNA-N3-methylpseudouridine1915]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC09g45870D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g45860D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g45950D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g19660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g29110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g21670D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g21650D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g05110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g33610D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR117032<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42753 42753]<br /> {{#set: ec-number=ec-2.1.1.177}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=9}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-15740 RXN-15740 2020-10-09T11:08:26Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-15740 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.5.3 ec-1.1.5.3] * direction: ** left-to-right * common-name: ** nil == Reaction...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-15740 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/1.1.5.3 ec-1.1.5.3]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[GLYCEROL-3P]][c] '''+''' 1 [[Menaquinones]][c] '''=&gt;''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[Menaquinols]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaA05g28450D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g38650D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g31820D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g42730D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g35610D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g40540D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PWY0-1581]], nitrate reduction IX (dissimilatory):<br /> ** '''1''' reactions found over '''2''' reactions in the full pathway<br /> * [[PWY0-1582]], glycerol-3-phosphate to fumarate electron transfer:<br /> ** '''1''' reactions found over '''2''' reactions in the full pathway<br /> * [[PWY0-1591]], glycerol-3-phosphate to hydrogen peroxide electron transport:<br /> ** '''1''' reactions found over '''2''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR143954<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29220 29220]<br /> {{#set: ec-number=ec-1.1.5.3}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=6}}<br /> {{#set: nb pathway associated=3}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-10464 RXN-10464 2020-10-09T11:08:25Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-10464 == * ec-number: ** [http://enzyme.expasy.org/EC/1.5.3.16 ec-1.5.3.16] * direction: ** left-to-right * common-name: ** nil == Reacti...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-10464 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/1.5.3.16 ec-1.5.3.16]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD-10689]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[CPD-6082]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[NORSPERMIDINE]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC08g10610D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g31180D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g44800D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g44770D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g08790D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g21130D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g04460D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g12280D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g26940D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g47630D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g34380D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g45540D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g48640D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g37140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g07220D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng33720D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g52890D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g40830D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g36510D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g23980D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g13010D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g06010D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g19980D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g06000D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g05680D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g18130D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g05670D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g12680D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA04g24770D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g17070D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g49640D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR116388<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25816 25816]<br /> {{#set: ec-number=ec-1.5.3.16}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=31}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/3.2.1.132-RXN 3.2.1.132-RXN 2020-10-09T11:08:25Z <p>Admin: Created page with &quot;Category:reaction == Reaction 3.2.1.132-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.132 ec-3.2.1.132] * direction: ** left-to-right * common-name: ** nil ==...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction 3.2.1.132-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.2.1.132 ec-3.2.1.132]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[Chitosan]][c] '''+''' n [[WATER]][c] '''=&gt;''' n [[Chitosan-fragments]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaA10g19580D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR115333<br /> {{#set: ec-number=ec-3.2.1.132}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=1}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-13729 RXN-13729 2020-10-09T11:08:25Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-13729 == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.27 ec-4.1.2.27] * direction: ** left-to-right * common-name: ** nil == Reacti...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-13729 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/4.1.2.27 ec-4.1.2.27]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[PHTYOSPHINGOSINE-1-P]][c] '''=&gt;''' 1 [[CPD-14766]][c] '''+''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaCnng16290D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng16270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g58220D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g18660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PWY-7119]], ceramide and sphingolipid recycling and degradation (yeast):<br /> ** '''7''' reactions found over '''16''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR103262<br /> {{#set: ec-number=ec-4.1.2.27}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=4}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-19997 RXN-19997 2020-10-09T11:08:25Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-19997 == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.60 ec-2.5.1.60] * direction: ** left-to-right * common-name: ** nil == Reacti...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-19997 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.5.1.60 ec-2.5.1.60]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CCXX-proteins]][c] '''+''' 2 [[GERANYLGERANYL-PP]][c] '''=&gt;''' 1 [[Geranylgeranylated-CCXX-proteins]][c] '''+''' 2 [[PPI]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaAnng10040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g41500D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g41870D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g17920D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g17930D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g17910D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g38940D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g03820D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g44490D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g18430D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g20460D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g34690D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g35170D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g53340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g17110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g05360D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng40160D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g46740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> {{#set: ec-number=ec-2.5.1.60}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=18}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-12642 RXN-12642 2020-10-09T11:08:24Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-12642 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.102 ec-1.1.1.102] * direction: ** left-to-right * common-name: ** nil == Reac...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-12642 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/1.1.1.102 ec-1.1.1.102]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD-13610]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=&gt;''' 1 [[CPD-13611]][c] '''+''' 1 [[NADP]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaC05g45760D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g54290D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g31220D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g15860D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g57370D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast):<br /> ** '''7''' reactions found over '''11''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR117672<br /> {{#set: ec-number=ec-1.1.1.102}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=5}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-12204 RXN-12204 2020-10-09T11:08:24Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-12204 == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.9.5 ec-2.7.9.5] * direction: ** left-to-right * common-name: ** nil == Reaction...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-12204 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.7.9.5 ec-2.7.9.5]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[6-Phosphogluco-Amylopectins]][c] '''+''' n [[ATP]][c] '''+''' n [[WATER]][c] '''=&gt;''' 1 [[6-Phosphoglc-3-Phosphoglc-Amylopectins]][c] '''+''' n [[AMP]][c] '''+''' n [[Pi]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaC01g44700D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g44690D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g03660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g31620D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g48400D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g04240D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PWY-6724]], starch degradation II:<br /> ** '''7''' reactions found over '''9''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR117411<br /> {{#set: ec-number=ec-2.7.9.5}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=6}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/ADENOSINE-KINASE-RXN ADENOSINE-KINASE-RXN 2020-10-09T11:08:24Z <p>Admin: Created page with &quot;Category:reaction == Reaction ADENOSINE-KINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.20 ec-2.7.1.20] * direction: ** left-to-right * common-name: ** ni...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction ADENOSINE-KINASE-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.7.1.20 ec-2.7.1.20]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[ADENOSINE]][c] '''+''' 1 [[ATP]][c] '''=&gt;''' 1 [[ADP]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC07g21600D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng02900D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g38960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g03230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g32050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g26640D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g50370D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g16600D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g01140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g48680D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g00830D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g35980D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-6619]], adenine and adenosine salvage VI:<br /> ** '''1''' reactions found over '''1''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR95456<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20825 20825]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R00185 R00185]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/Q64640 Q64640]<br /> ** [http://www.uniprot.org/uniprot/P55263 P55263]<br /> {{#set: ec-number=ec-2.7.1.20}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=12}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-7755 RXN-7755 2020-10-09T11:08:24Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-7755 == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.185 ec-2.4.1.185] * direction: ** left-to-right * common-name: ** nil == React...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-7755 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.4.1.185 ec-2.4.1.185]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD-12575]][c] '''+''' 1 [[CPD-7072]][c] '''=&gt;''' 1 [[CPD-7073]][c] '''+''' 1 [[UDP]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaA07g03360D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g25780D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g14270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PWY-5105]], hesperitin glycoside biosynthesis:<br /> ** '''1''' reactions found over '''4''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR144053<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R08021 R08021]<br /> {{#set: ec-number=ec-2.4.1.185}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=3}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN 2020-10-09T11:08:24Z <p>Admin: Created page with &quot;Category:reaction == Reaction 3-DEHYDROQUINATE-SYNTHASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.3.4 ec-4.2.3.4] * direction: ** left-to-right * common-name...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction 3-DEHYDROQUINATE-SYNTHASE-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/4.2.3.4 ec-4.2.3.4]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''=&gt;''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[Pi]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaC07g25310D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g08240D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g31310D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g08060D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g06770D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PWY-6164]], 3-dehydroquinate biosynthesis I:<br /> ** '''2''' reactions found over '''2''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR97447<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21969 21969]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R03083 R03083]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/P07547 P07547]<br /> ** [http://www.uniprot.org/uniprot/P08566 P08566]<br /> ** [http://www.uniprot.org/uniprot/Q9CES8 Q9CES8]<br /> ** [http://www.uniprot.org/uniprot/Q9PNT2 Q9PNT2]<br /> ** [http://www.uniprot.org/uniprot/P43879 P43879]<br /> ** [http://www.uniprot.org/uniprot/Q9JVW5 Q9JVW5]<br /> ** [http://www.uniprot.org/uniprot/P0A4Z4 P0A4Z4]<br /> ** [http://www.uniprot.org/uniprot/P07639 P07639]<br /> ** [http://www.uniprot.org/uniprot/Q9P7R0 Q9P7R0]<br /> {{#set: ec-number=ec-4.2.3.4}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=5}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-8042 RXN-8042 2020-10-09T11:08:24Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-8042 == * ec-number: ** [http://enzyme.expasy.org/EC/5.2.1.13 ec-5.2.1.13] * direction: ** left-to-right * common-name: ** nil == Reactio...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-8042 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/5.2.1.13 ec-5.2.1.13]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD-7496]][c] '''=&gt;''' 1 [[CPD1F-114]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaCnng31610D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g15740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g15170D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g49740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g44970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):<br /> ** '''8''' reactions found over '''8''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR111133<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30974 30974]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R07512 R07512]<br /> {{#set: ec-number=ec-5.2.1.13}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=5}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN1G-1439 RXN1G-1439 2020-10-09T11:08:24Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN1G-1439 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.12 ec-3.1.3.12] * direction: ** left-to-right * common-name: ** nil == React...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN1G-1439 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.1.3.12 ec-3.1.3.12]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD1G-774]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[CPD1G-1354]][c] '''+''' 1 [[Pi]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC09g51060D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng33310D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g34770D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g46980D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g39000D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng42030D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng41250D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g45450D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g45430D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g43070D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g37370D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g37350D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g18730D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g18740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g11230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g06450D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g01800D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g09720D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g29600D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g18930D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g18920D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g24780D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g25020D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g27860D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g19750D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g25110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g43320D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g25400D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g14030D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g14790D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g22200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g07960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g31780D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g37150D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g24090D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g50330D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g60640D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g12320D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g11460D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g11450D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g08660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g49150D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g20280D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g13090D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g28610D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g33960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g34230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA04g12690D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g24830D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g48650D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng04500D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng22210D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g34580D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g26160D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g54540D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g38600D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g16230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWYG-321]], mycolate biosynthesis:<br /> ** '''5''' reactions found over '''182''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR123481<br /> {{#set: ec-number=ec-3.1.3.12}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=57}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-5647 RXN-5647 2020-10-09T11:08:24Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-5647 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.75 ec-3.1.3.75] * direction: ** left-to-right * common-name: ** nil == Reactio...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-5647 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.1.3.75 ec-3.1.3.75]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[CHOLINE]][c] '''+''' 1 [[Pi]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaC08g37550D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g17490D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g50000D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g44850D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g23000D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PWY-3385]], choline biosynthesis I:<br /> ** '''5''' reactions found over '''6''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR96685<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10493 10493]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R06871 R06871]<br /> {{#set: ec-number=ec-3.1.3.75}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=5}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-3482 RXN-3482 2020-10-09T11:08:23Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-3482 == * direction: ** left-to-right * spontaneous: ** t == Reaction formula == * 1 HYDROXYLAMINE[c] '''+''' 1 PYRUVATE[c] '''=&gt;...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-3482 ==<br /> * direction:<br /> ** left-to-right<br /> * spontaneous:<br /> ** t<br /> == Reaction formula ==<br /> * 1 [[HYDROXYLAMINE]][c] '''+''' 1 [[PYRUVATE]][c] '''=&gt;''' 1 [[CPD-3344]][c] '''+''' 1 [[WATER]][c]<br /> == Gene(s) associated with this reaction ==<br /> == Pathway(s) ==<br /> * [[PWY-2242]], ammonia oxidation III:<br /> ** '''1''' reactions found over '''3''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR121671<br /> {{#set: direction=left-to-right}}<br /> {{#set: spontaneous=t}}<br /> {{#set: nb gene associated=0}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-8149 RXN-8149 2020-10-09T11:08:23Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-8149 == * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.32 ec-1.14.11.32] * direction: ** left-to-right * common-name: ** nil == Rea...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-8149 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/1.14.11.32 ec-1.14.11.32]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-7710]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=&gt;''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-7713]][c] '''+''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[SUC]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC09g54110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g39490D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g39480D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g32130D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g15040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g25140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g56140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g14670D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g14680D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng38110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g30850D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g12030D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-5270]], morphine biosynthesis:<br /> ** '''7''' reactions found over '''13''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR109338<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R05127 R05127]<br /> {{#set: ec-number=ec-1.14.11.32}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=12}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXNQT-4329 RXNQT-4329 2020-10-09T11:08:23Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXNQT-4329 == * ec-number: ** [http://enzyme.expasy.org/EC/2.8.2.38 ec-2.8.2.38] * direction: ** left-to-right * common-name: ** 4-methylthio...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXNQT-4329 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.8.2.38 ec-2.8.2.38]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** 4-methylthiobutyl-desulfoglucosinolate sulfotransferase<br /> == Reaction formula ==<br /> * 1 [[CPDQT-416]][c] '''+''' 1 [[PAPS]][c] '''=&gt;''' 1 [[3-5-ADP]][c] '''+''' 1 [[CPDQT-281]][c] '''+''' 1 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC06g34930D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC06g34970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC06g34990D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g15460D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g15480D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g15510D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaC09g14380D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA07g22430D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA07g31230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA07g31250D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g14840D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g14870D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g14880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> * Gene: [[BnaA09g14900D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWYQT-4471]], glucosinolate biosynthesis from dihomomethionine:<br /> ** '''4''' reactions found over '''17''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR123840<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R08671 R08671]<br /> {{#set: ec-number=ec-2.8.2.38}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=4-methylthiobutyl-desulfoglucosinolate sulfotransferase}}<br /> {{#set: nb gene associated=14}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/3.4.16.5-RXN 3.4.16.5-RXN 2020-10-09T11:08:23Z <p>Admin: Created page with &quot;Category:reaction == Reaction 3.4.16.5-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.16.5 ec-3.4.16.5] * direction: ** left-to-right * common-name: ** nil == Rea...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction 3.4.16.5-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.4.16.5 ec-3.4.16.5]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[Carboxypeptidase-C-Substrates]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[Amino-Acids-20]][c] '''+''' 1 [[Peptides-holder]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaA03g31200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g39110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g08760D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g06090D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g38630D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g45300D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g04850D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng00370D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g08770D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g13620D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g29380D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g39380D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g55150D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g21100D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g21110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g09750D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g36530D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g18620D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g11090D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g11310D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g36100D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA04g16130D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g11300D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g11240D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g28410D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA04g07190D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g42700D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/P11515 P11515]<br /> ** [http://www.uniprot.org/uniprot/P10619 P10619]<br /> ** [http://www.uniprot.org/uniprot/P07519 P07519]<br /> ** [http://www.uniprot.org/uniprot/P00729 P00729]<br /> ** [http://www.uniprot.org/uniprot/P37891 P37891]<br /> ** [http://www.uniprot.org/uniprot/P37890 P37890]<br /> ** [http://www.uniprot.org/uniprot/P38109 P38109]<br /> ** [http://www.uniprot.org/uniprot/P52710 P52710]<br /> ** [http://www.uniprot.org/uniprot/Q41005 Q41005]<br /> ** [http://www.uniprot.org/uniprot/P52712 P52712]<br /> ** [http://www.uniprot.org/uniprot/Q41689 Q41689]<br /> ** [http://www.uniprot.org/uniprot/Q41691 Q41691]<br /> ** [http://www.uniprot.org/uniprot/O13849 O13849]<br /> {{#set: ec-number=ec-3.4.16.5}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=27}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-16998 RXN-16998 2020-10-09T11:08:23Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-16998 == * direction: ** reversible * common-name: ** nil == Reaction formula == * 1 ALPHA-GLUCOSE-16-BISPHOSPHATE[c] '''+''' 1 Pho...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-16998 ==<br /> * direction:<br /> ** reversible<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[ALPHA-GLUCOSE-16-BISPHOSPHATE]][c] '''+''' 1 [[Phosphoglucomutase]][c] '''&lt;=&gt;''' 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[Phosphorylated-phosphoglucomutase]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC05g18490D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g06220D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g06210D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng44490D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g31970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g03650D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g07730D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g44120D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g55140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g28910D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g20600D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g30060D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR120568<br /> {{#set: direction=reversible}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=12}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-4301 RXN-4301 2020-10-09T11:08:23Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-4301 == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.68 ec-3.2.1.68] * direction: ** left-to-right * common-name: ** nil == Reactio...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-4301 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.2.1.68 ec-3.2.1.68]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[Glycogens]][c] '''+''' n [[WATER]][c] '''=&gt;''' n [[Maltodextrins]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC08g03940D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g03790D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g03780D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g00230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g23880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng67200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g05440D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g05660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g01800D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g28400D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g01880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g27410D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g27420D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng16650D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-2661]], trehalose biosynthesis V:<br /> ** '''2''' reactions found over '''3''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR121714<br /> {{#set: ec-number=ec-3.2.1.68}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=14}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-9222 RXN-9222 2020-10-09T11:08:22Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-9222 == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.39 ec-2.5.1.39] * direction: ** left-to-right * common-name: ** nil == Reactio...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-9222 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.5.1.39 ec-2.5.1.39]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[ALL-TRANS-HEPTAPRENYL-DIPHOSPHATE]][c] '''=&gt;''' 1 [[CPD-9852]][c] '''+''' 1 [[PPI]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC01g15470D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g13340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g50260D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g62150D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g62160D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g15050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g46150D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g46160D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-5873]], ubiquinol-7 biosynthesis (eukaryotic):<br /> ** '''2''' reactions found over '''8''' reactions in the full pathway<br /> * [[PWY-5855]], ubiquinol-7 biosynthesis (prokaryotic):<br /> ** '''2''' reactions found over '''8''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR122714<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44561 44561]<br /> {{#set: ec-number=ec-2.5.1.39}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=8}}<br /> {{#set: nb pathway associated=2}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-1223 RXN-1223 2020-10-09T11:08:22Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-1223 == * ec-number: ** [http://enzyme.expasy.org/EC/3.13.1.1 ec-3.13.1.1] * direction: ** left-to-right * common-name: ** nil == Reactio...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-1223 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.13.1.1 ec-3.13.1.1]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD-12575]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SO3]][c] '''=&gt;''' 1 [[UDP-SULFOQUINOVOSE]][c] '''+''' 1 [[WATER]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaC01g05200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g03840D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g44070D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g52320D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PWYQT-4427]], sulfoquinovosyl diacylglycerol biosynthesis:<br /> ** '''2''' reactions found over '''2''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR143399<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13197 13197]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R05775 R05775]<br /> {{#set: ec-number=ec-3.13.1.1}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=4}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/ANTHRANSYN-RXN ANTHRANSYN-RXN 2020-10-09T11:08:22Z <p>Admin: Created page with &quot;Category:reaction == Reaction ANTHRANSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.3.27 ec-4.1.3.27] * direction: ** reversible * common-name: ** nil == Reac...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction ANTHRANSYN-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/4.1.3.27 ec-4.1.3.27]<br /> * direction:<br /> ** reversible<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CHORISMATE]][c] '''+''' 1 [[GLN]][c] '''&lt;=&gt;''' 1 [[ANTHRANILATE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaA03g21950D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g49740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng57400D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g28350D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g21960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g23920D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g24820D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g14970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g26280D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g26270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g19240D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g02240D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng36920D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g01690D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng04780D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-6661]], 4-hydroxy-2(1H)-quinolone biosynthesis:<br /> ** '''1''' reactions found over '''5''' reactions in the full pathway<br /> * [[TRPSYN-PWY]], L-tryptophan biosynthesis:<br /> ** '''6''' reactions found over '''6''' reactions in the full pathway<br /> * [[PWY-5958]], acridone alkaloid biosynthesis:<br /> ** '''1''' reactions found over '''4''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * METANETX-RXN : MNXR95843<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21735 21735]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R00986 R00986]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/P00897 P00897]<br /> ** [http://www.uniprot.org/uniprot/P15395 P15395]<br /> ** [http://www.uniprot.org/uniprot/P21690 P21690]<br /> ** [http://www.uniprot.org/uniprot/P33975 P33975]<br /> ** [http://www.uniprot.org/uniprot/Q9PIF4 Q9PIF4]<br /> ** [http://www.uniprot.org/uniprot/P06557 P06557]<br /> ** [http://www.uniprot.org/uniprot/P20463 P20463]<br /> ** [http://www.uniprot.org/uniprot/P09786 P09786]<br /> ** [http://www.uniprot.org/uniprot/Q06129 Q06129]<br /> ** [http://www.uniprot.org/uniprot/P33974 P33974]<br /> ** [http://www.uniprot.org/uniprot/Q9R5Z6 Q9R5Z6]<br /> ** [http://www.uniprot.org/uniprot/Q58475 Q58475]<br /> ** [http://www.uniprot.org/uniprot/P20441 P20441]<br /> ** [http://www.uniprot.org/uniprot/P43761 P43761]<br /> ** [http://www.uniprot.org/uniprot/Q57686 Q57686]<br /> ** [http://www.uniprot.org/uniprot/Q08654 Q08654]<br /> ** [http://www.uniprot.org/uniprot/Q8X3T2 Q8X3T2]<br /> ** [http://www.uniprot.org/uniprot/P20580 P20580]<br /> ** [http://www.uniprot.org/uniprot/Q08653 Q08653]<br /> ** [http://www.uniprot.org/uniprot/Q8X3T1 Q8X3T1]<br /> ** [http://www.uniprot.org/uniprot/P20579 P20579]<br /> ** [http://www.uniprot.org/uniprot/P09785 P09785]<br /> ** [http://www.uniprot.org/uniprot/Q9JUS0 Q9JUS0]<br /> ** [http://www.uniprot.org/uniprot/Q02001 Q02001]<br /> ** [http://www.uniprot.org/uniprot/Q57690 Q57690]<br /> ** [http://www.uniprot.org/uniprot/Q9XAZ0 Q9XAZ0]<br /> ** [http://www.uniprot.org/uniprot/Q9PIF5 Q9PIF5]<br /> ** [http://www.uniprot.org/uniprot/P42387 P42387]<br /> ** [http://www.uniprot.org/uniprot/P42388 P42388]<br /> ** [http://www.uniprot.org/uniprot/Q06128 Q06128]<br /> ** [http://www.uniprot.org/uniprot/P18267 P18267]<br /> ** [http://www.uniprot.org/uniprot/P32068 P32068]<br /> ** [http://www.uniprot.org/uniprot/Q42565 Q42565]<br /> ** [http://www.uniprot.org/uniprot/P20409 P20409]<br /> ** [http://www.uniprot.org/uniprot/P14953 P14953]<br /> ** [http://www.uniprot.org/uniprot/P03963 P03963]<br /> ** [http://www.uniprot.org/uniprot/P00899 P00899]<br /> ** [http://www.uniprot.org/uniprot/P00937 P00937]<br /> ** [http://www.uniprot.org/uniprot/P00896 P00896]<br /> ** [http://www.uniprot.org/uniprot/P00898 P00898]<br /> ** [http://www.uniprot.org/uniprot/P00906 P00906]<br /> ** [http://www.uniprot.org/uniprot/P00905 P00905]<br /> ** [http://www.uniprot.org/uniprot/P00895 P00895]<br /> ** [http://www.uniprot.org/uniprot/P00904 P00904]<br /> ** [http://www.uniprot.org/uniprot/P00902 P00902]<br /> ** [http://www.uniprot.org/uniprot/P00908 P00908]<br /> ** [http://www.uniprot.org/uniprot/P00901 P00901]<br /> ** [http://www.uniprot.org/uniprot/P00900 P00900]<br /> ** [http://www.uniprot.org/uniprot/P14952 P14952]<br /> ** [http://www.uniprot.org/uniprot/P05328 P05328]<br /> ** [http://www.uniprot.org/uniprot/P06531 P06531]<br /> ** [http://www.uniprot.org/uniprot/P23315 P23315]<br /> ** [http://www.uniprot.org/uniprot/P25170 P25170]<br /> ** [http://www.uniprot.org/uniprot/P30526 P30526]<br /> ** [http://www.uniprot.org/uniprot/P32069 P32069]<br /> ** [http://www.uniprot.org/uniprot/P24773 P24773]<br /> ** [http://www.uniprot.org/uniprot/Q02003 Q02003]<br /> ** [http://www.uniprot.org/uniprot/P51362 P51362]<br /> ** [http://www.uniprot.org/uniprot/Q55144 Q55144]<br /> ** [http://www.uniprot.org/uniprot/P20170 P20170]<br /> ** [http://www.uniprot.org/uniprot/P74130 P74130]<br /> ** [http://www.uniprot.org/uniprot/O81533 O81533]<br /> ** [http://www.uniprot.org/uniprot/Q08073 Q08073]<br /> ** [http://www.uniprot.org/uniprot/P48261 P48261]<br /> ** [http://www.uniprot.org/uniprot/Q92370 Q92370]<br /> ** [http://www.uniprot.org/uniprot/Q9S593 Q9S593]<br /> ** [http://www.uniprot.org/uniprot/Q9X7C5 Q9X7C5]<br /> ** [http://www.uniprot.org/uniprot/Q9RQG2 Q9RQG2]<br /> ** [http://www.uniprot.org/uniprot/Q9ZFA9 Q9ZFA9]<br /> ** [http://www.uniprot.org/uniprot/Q41156 Q41156]<br /> &lt;/div&gt;<br /> {{#set: ec-number=ec-4.1.3.27}}<br /> {{#set: direction=reversible}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=15}}<br /> {{#set: nb pathway associated=3}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN 2020-10-09T11:08:22Z <p>Admin: Created page with &quot;Category:reaction == Reaction DETHIOBIOTIN-SYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.3.3 ec-6.3.3.3] * direction: ** left-to-right * common-name: ** nil...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction DETHIOBIOTIN-SYN-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/6.3.3.3 ec-6.3.3.3]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[ATP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DIAMINONONANOATE]][c] '''=&gt;''' 1 [[ADP]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[Pi]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC01g43270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g10210D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g11520D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g12880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g32740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g05970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng68410D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng70850D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II:<br /> ** '''3''' reactions found over '''4''' reactions in the full pathway<br /> * [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:<br /> ** '''4''' reactions found over '''4''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR97180<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15805 15805]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R03182 R03182]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/Q9JV95 Q9JV95]<br /> ** [http://www.uniprot.org/uniprot/Q9PIJ1 Q9PIJ1]<br /> ** [http://www.uniprot.org/uniprot/P46397 P46397]<br /> ** [http://www.uniprot.org/uniprot/P22818 P22818]<br /> ** [http://www.uniprot.org/uniprot/P13000 P13000]<br /> {{#set: ec-number=ec-6.3.3.3}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=8}}<br /> {{#set: nb pathway associated=2}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-11963 RXN-11963 2020-10-09T11:08:22Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-11963 == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.87 ec-2.5.1.87] * direction: ** reversible * common-name: ** nil == Reaction...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-11963 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.5.1.87 ec-2.5.1.87]<br /> * direction:<br /> ** reversible<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * n [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''&lt;=&gt;''' 1 [[Di-trans-poly-cis-polyprenyl-PP]][c] '''+''' n [[PPI]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaC03g26600D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g07340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g15070D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g25150D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR117261<br /> {{#set: ec-number=ec-2.5.1.87}}<br /> {{#set: direction=reversible}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=4}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-14116 RXN-14116 2020-10-09T11:08:22Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-14116 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.88 ec-1.2.1.88] * direction: ** left-to-right * common-name: ** nil == Reacti...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-14116 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/1.2.1.88 ec-1.2.1.88]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaA02g33470D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g74750D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g28900D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g22040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g33460D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng21870D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PROUT-PWY]], L-proline degradation:<br /> ** '''3''' reactions found over '''3''' reactions in the full pathway<br /> * [[PWY-6853]], ethene biosynthesis II (microbes):<br /> ** '''2''' reactions found over '''5''' reactions in the full pathway<br /> * [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway):<br /> ** '''3''' reactions found over '''3''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR103352<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R00245 R00245]<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30236 30236]<br /> {{#set: ec-number=ec-1.2.1.88}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=6}}<br /> {{#set: nb pathway associated=3}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-14917 RXN-14917 2020-10-09T11:08:21Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-14917 == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.295 ec-2.1.1.295] * direction: ** left-to-right * common-name: ** nil == Reac...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-14917 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.1.1.295 ec-2.1.1.295]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD-11712]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=&gt;''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-15834]][c] '''+''' 1 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaA07g19580D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g18830D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PWY-7436]], vitamin E biosynthesis (tocotrienols):<br /> ** '''5''' reactions found over '''6''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R10710 R10710]<br /> * METANETX-RXN : MNXR114029<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=38008 38008]<br /> {{#set: ec-number=ec-2.1.1.295}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=2}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-12889 RXN-12889 2020-10-09T11:08:21Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-12889 == * common-name: ** protein n-terminal methyltransferase ** nil * direction: ** left-to-right == Reaction formula == * 1 N-termi...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-12889 ==<br /> * common-name:<br /> ** protein n-terminal methyltransferase<br /> ** nil<br /> * direction:<br /> ** left-to-right<br /> == Reaction formula ==<br /> * 1 [[N-terminal-XPK]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=&gt;''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[N-methyl-terminal-XPK]][c] '''+''' 1 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaAnng10060D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng52650D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g12470D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g17140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g07530D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g18410D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR117789<br /> {{#set: common-name=protein n-terminal methyltransferase|nil}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: nb gene associated=6}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-9311 RXN-9311 2020-10-09T11:08:21Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-9311 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.28 ec-3.1.2.28] * direction: ** left-to-right * common-name: ** nil == Reactio...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-9311 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.1.2.28 ec-3.1.2.28]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD-9925]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[CO-A]][c] '''+''' 1 [[DIHYDROXYNAPHTHOATE]][c] '''+''' 1 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC08g03640D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g26940D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng16100D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g14110D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g18740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g03870D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g29800D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g28740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g03370D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g01920D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g17470D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g25660D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-5837]], 2-carboxy-1,4-naphthoquinol biosynthesis:<br /> ** '''7''' reactions found over '''7''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR110945<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26310 26310]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R07262 R07262]<br /> {{#set: ec-number=ec-3.1.2.28}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=12}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/GALACTURONOKINASE-RXN GALACTURONOKINASE-RXN 2020-10-09T11:08:21Z <p>Admin: Created page with &quot;Category:reaction == Reaction GALACTURONOKINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.44 ec-2.7.1.44] * direction: ** left-to-right * common-name: ** n...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction GALACTURONOKINASE-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.7.1.44 ec-2.7.1.44]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[ATP]][c] '''+''' 1 [[D-Galactopyranuronate]][c] '''=&gt;''' 1 [[ADP]][c] '''+''' 1 [[CPD-501]][c] '''+''' 1 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaA03g27380D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng60720D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g19280D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g19270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g31870D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g43040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g32380D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g42340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-4]], UDP-&amp;alpha;-D-galacturonate biosynthesis II (from D-galacturonate):<br /> ** '''2''' reactions found over '''3''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR107258<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12966 12966]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R01980 R01980]<br /> {{#set: ec-number=ec-2.7.1.44}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=8}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN 2020-10-09T11:08:21Z <p>Admin: Created page with &quot;Category:reaction == Reaction NITRATE-REDUCTASE-NADH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.7.1.1 ec-1.7.1.1] * direction: ** left-to-right * common-name: *...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction NITRATE-REDUCTASE-NADH-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/1.7.1.1 ec-1.7.1.1]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[NADH]][c] '''+''' 1 [[NITRATE]][c] '''+''' 1 [[PROTON]][c] '''=&gt;''' 1 [[NAD]][c] '''+''' 1 [[NITRITE]][c] '''+''' 1 [[WATER]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaA02g18610D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng60930D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g08200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g20840D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g10400D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g33680D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g33690D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g20690D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g38300D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-381]], nitrate reduction II (assimilatory):<br /> ** '''3''' reactions found over '''3''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * METANETX-RXN : MNXR101964<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17915 17915]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/Q39607 Q39607]<br /> ** [http://www.uniprot.org/uniprot/Q41201 Q41201]<br /> ** [http://www.uniprot.org/uniprot/P17569 P17569]<br /> ** [http://www.uniprot.org/uniprot/P54233 P54233]<br /> ** [http://www.uniprot.org/uniprot/P36841 P36841]<br /> ** [http://www.uniprot.org/uniprot/P27967 P27967]<br /> ** [http://www.uniprot.org/uniprot/P27969 P27969]<br /> ** [http://www.uniprot.org/uniprot/P11035 P11035]<br /> ** [http://www.uniprot.org/uniprot/P08509 P08509]<br /> ** [http://www.uniprot.org/uniprot/P11605 P11605]<br /> ** [http://www.uniprot.org/uniprot/P23312 P23312]<br /> ** [http://www.uniprot.org/uniprot/P17570 P17570]<br /> ** [http://www.uniprot.org/uniprot/P16081 P16081]<br /> ** [http://www.uniprot.org/uniprot/Q01170 Q01170]<br /> ** [http://www.uniprot.org/uniprot/P39865 P39865]<br /> ** [http://www.uniprot.org/uniprot/P11832 P11832]<br /> ** [http://www.uniprot.org/uniprot/P39869 P39869]<br /> ** [http://www.uniprot.org/uniprot/Q43265 Q43265]<br /> ** [http://www.uniprot.org/uniprot/P43101 P43101]<br /> ** [http://www.uniprot.org/uniprot/P43100 P43100]<br /> ** [http://www.uniprot.org/uniprot/Q42497 Q42497]<br /> ** [http://www.uniprot.org/uniprot/P39866 P39866]<br /> &lt;/div&gt;<br /> {{#set: ec-number=ec-1.7.1.1}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=9}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-11361 RXN-11361 2020-10-09T11:08:21Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-11361 == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.80 ec-2.7.7.80] * direction: ** left-to-right * common-name: ** nil == Reacti...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-11361 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.7.7.80 ec-2.7.7.80]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[ATP]][c] '''+''' 1 [[MPT-Synthase-small-subunits]][c] '''+''' 1 [[PROTON]][c] '''=&gt;''' 1 [[Carboxyadenylated-MPT-synthases]][c] '''+''' 1 [[PPI]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaA02g09250D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g24140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g31920D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g13300D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g09380D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g55950D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g31780D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-6823]], molybdenum cofactor biosynthesis:<br /> ** '''8''' reactions found over '''8''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR116882<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43617 43617]<br /> {{#set: ec-number=ec-2.7.7.80}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=7}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-12900 RXN-12900 2020-10-09T11:08:21Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-12900 == * ec-number: ** [http://enzyme.expasy.org/EC/1.14.13.148 ec-1.14.13.148] * direction: ** left-to-right * common-name: ** nil ==...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-12900 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/1.14.13.148 ec-1.14.13.148]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[TRIMETHYLAMINE]][c] '''=&gt;''' 1 [[NADP]][c] '''+''' 1 [[TRIMETHYLAMINE-N-O]][c] '''+''' 1 [[WATER]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaC05g26430D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> * [[PWY-6968]], trimethylamine degradation:<br /> ** '''1''' reactions found over '''3''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R05623 R05623]<br /> * METANETX-RXN : MNXR109720<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31980 31980]<br /> {{#set: ec-number=ec-1.14.13.148}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=1}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN1ZN3-10 RXN1ZN3-10 2020-10-09T11:08:21Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN1ZN3-10 == * direction: ** left-to-right * common-name: ** nil == Reaction formula == * 1 ATP[c] '''+''' 1 CPD1ZN3-1[c] '''=&gt;''' 1...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN1ZN3-10 ==<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[ATP]][c] '''+''' 1 [[CPD1ZN3-1]][c] '''=&gt;''' 1 [[ADP]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC01g43270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g10210D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g11520D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g12880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g32740D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g05970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng68410D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng70850D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-8128]], biotin biosynthesis from 8-amino-7-oxononanoate III:<br /> ** '''3''' reactions found over '''5''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=8}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN66-3 RXN66-3 2020-10-09T11:08:20Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN66-3 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3] * direction: ** left-to-right * common-name: ** nil == Reaction f...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN66-3 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[ACETALD]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[ACET]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC05g45180D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g50730D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g50720D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng49760D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g06430D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g29540D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g43810D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g30730D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng12150D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g02370D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g04140D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g37390D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g16950D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g08800D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g08810D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g01360D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g02880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g20750D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g01320D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g59170D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g61970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g78230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g06890D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g53360D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g26280D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g20300D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g25340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g47240D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g29890D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g04430D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g18900D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g15200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g05850D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng23170D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g00900D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g46060D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng30530D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g05150D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-7387]], hypotaurine degradation:<br /> ** '''1''' reactions found over '''3''' reactions in the full pathway<br /> * [[PWY66-162]], ethanol degradation IV:<br /> ** '''3''' reactions found over '''3''' reactions in the full pathway<br /> * [[PWY66-21]], ethanol degradation II:<br /> ** '''3''' reactions found over '''3''' reactions in the full pathway<br /> * [[PWY66-161]], ethanol degradation III:<br /> ** '''2''' reactions found over '''3''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR95749<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25295 25295]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R00710 R00710]<br /> {{#set: ec-number=ec-1.2.1.3}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=38}}<br /> {{#set: nb pathway associated=4}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/AMINOACYLASE-RXN AMINOACYLASE-RXN 2020-10-09T11:08:20Z <p>Admin: Created page with &quot;Category:reaction == Reaction AMINOACYLASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.14 ec-3.5.1.14] * direction: ** left-to-right * common-name: ** nil ==...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction AMINOACYLASE-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.5.1.14 ec-3.5.1.14]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[N-Acylated-Aliphatic-Amino-Acids]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[Aliphatic-L-Amino-Acids]][c] '''+''' 1 [[Carboxylates]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaCnng34250D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g40880D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g08590D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g56420D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g19380D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g40730D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng17940D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng71090D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR115699<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15565 15565]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R01263 R01263]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/Q03154 Q03154]<br /> ** [http://www.uniprot.org/uniprot/Q8X8Q0 Q8X8Q0]<br /> ** [http://www.uniprot.org/uniprot/P72349 P72349]<br /> ** [http://www.uniprot.org/uniprot/P37111 P37111]<br /> {{#set: ec-number=ec-3.5.1.14}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=8}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/ACONITATEDEHYDR-RXN ACONITATEDEHYDR-RXN 2020-10-09T11:08:20Z <p>Admin: Created page with &quot;Category:reaction == Reaction ACONITATEDEHYDR-RXN == * direction: ** reversible * common-name: ** nil == Reaction formula == * 1 CIT[c] '''&lt;=&gt;''' 1 CIS-ACONITATE[c...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction ACONITATEDEHYDR-RXN ==<br /> * direction:<br /> ** reversible<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CIT]][c] '''&lt;=&gt;''' 1 [[CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC01g02790D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g38100D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g06410D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g01700D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g07200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g06420D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g31450D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g62580D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g74450D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng14360D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g14870D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g14220D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g04160D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng22230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * [[P23-PWY]], reductive TCA cycle I:<br /> ** '''8''' reactions found over '''12''' reactions in the full pathway<br /> * [[PWY-5392]], reductive TCA cycle II:<br /> ** '''5''' reactions found over '''12''' reactions in the full pathway<br /> * [[PWY-6549]], L-glutamine biosynthesis III:<br /> ** '''9''' reactions found over '''9''' reactions in the full pathway<br /> * [[TCA]], TCA cycle I (prokaryotic):<br /> ** '''8''' reactions found over '''10''' reactions in the full pathway<br /> * [[PWY-7254]], TCA cycle VII (acetate-producers):<br /> ** '''6''' reactions found over '''9''' reactions in the full pathway<br /> * [[PWY-5690]], TCA cycle II (plants and fungi):<br /> ** '''8''' reactions found over '''9''' reactions in the full pathway<br /> * [[PWY66-398]], TCA cycle III (animals):<br /> ** '''9''' reactions found over '''10''' reactions in the full pathway<br /> * [[PWY-5913]], partial TCA cycle (obligate autotrophs):<br /> ** '''7''' reactions found over '''8''' reactions in the full pathway<br /> * [[REDCITCYC]], TCA cycle VI (Helicobacter):<br /> ** '''5''' reactions found over '''9''' reactions in the full pathway<br /> * [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):<br /> ** '''10''' reactions found over '''12''' reactions in the full pathway<br /> * [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):<br /> ** '''9''' reactions found over '''11''' reactions in the full pathway<br /> * [[PWY-7124]], ethene biosynthesis V (engineered):<br /> ** '''8''' reactions found over '''8''' reactions in the full pathway<br /> * [[FERMENTATION-PWY]], mixed acid fermentation:<br /> ** '''10''' reactions found over '''16''' reactions in the full pathway<br /> * [[GLYOXYLATE-BYPASS]], glyoxylate cycle:<br /> ** '''6''' reactions found over '''6''' reactions in the full pathway<br /> * [[PWY-6728]], methylaspartate cycle:<br /> ** '''10''' reactions found over '''19''' reactions in the full pathway<br /> &lt;/div&gt;<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * METANETX-RXN : MNXR95386<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10231 10231]<br /> * PIR:<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A35544 A35544]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A44153 A44153]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A44154 A44154]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A47184 A47184]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A81801 A81801]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B48642 B48642]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C64362 C64362]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C64617 C64617]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C81356 C81356]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F64734 F64734]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F70873 F70873]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64875 G64875]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G69599 G69599]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G86708 G86708]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H81775 H81775]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S17526 S17526]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S18720 S18720]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26403 S26403]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S49849 S49849]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S50387 S50387]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57528 S57528]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57805 S57805]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S76777 S76777]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04693 T04693]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04820 T04820]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07611 T07611]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10101 T10101]<br /> ** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52543 T52543]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/P16276 P16276]<br /> ** [http://www.uniprot.org/uniprot/Q01059 Q01059]<br /> ** [http://www.uniprot.org/uniprot/Q9TSA1 Q9TSA1]<br /> ** [http://www.uniprot.org/uniprot/Q9JTI5 Q9JTI5]<br /> ** [http://www.uniprot.org/uniprot/P37032 P37032]<br /> ** [http://www.uniprot.org/uniprot/P81291 P81291]<br /> ** [http://www.uniprot.org/uniprot/Q9PP88 Q9PP88]<br /> ** [http://www.uniprot.org/uniprot/P36683 P36683]<br /> ** [http://www.uniprot.org/uniprot/O53166 O53166]<br /> ** [http://www.uniprot.org/uniprot/P25516 P25516]<br /> ** [http://www.uniprot.org/uniprot/P09339 P09339]<br /> ** [http://www.uniprot.org/uniprot/Q9CHQ5 Q9CHQ5]<br /> ** [http://www.uniprot.org/uniprot/Q9JT05 Q9JT05]<br /> ** [http://www.uniprot.org/uniprot/Q99798 Q99798]<br /> ** [http://www.uniprot.org/uniprot/P28271 P28271]<br /> ** [http://www.uniprot.org/uniprot/P21399 P21399]<br /> ** [http://www.uniprot.org/uniprot/Q42669 Q42669]<br /> ** [http://www.uniprot.org/uniprot/P19414 P19414]<br /> ** [http://www.uniprot.org/uniprot/P20004 P20004]<br /> ** [http://www.uniprot.org/uniprot/P49609 P49609]<br /> ** [http://www.uniprot.org/uniprot/P74582 P74582]<br /> ** [http://www.uniprot.org/uniprot/Q42560 Q42560]<br /> ** [http://www.uniprot.org/uniprot/Q9SZ36 Q9SZ36]<br /> ** [http://www.uniprot.org/uniprot/O04916 O04916]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R01325 R01325]<br /> &lt;/div&gt;<br /> {{#set: direction=reversible}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=14}}<br /> {{#set: nb pathway associated=15}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/RXN-18669 RXN-18669 2020-10-09T11:08:20Z <p>Admin: Created page with &quot;Category:reaction == Reaction RXN-18669 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.84 ec-2.3.1.84] * direction: ** left-to-right * common-name: ** nil == Reacti...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction RXN-18669 ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.3.1.84 ec-2.3.1.84]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[ACETYL-COA]][c] '''+''' 1 [[PROPANOL]][c] '''=&gt;''' 1 [[CO-A]][c] '''+''' 1 [[CPD-18998]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC09g52940D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g39400D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g38470D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g06970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g06580D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g06600D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g06610D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC09g41100D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g25050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g05580D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g17730D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g54240D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g31400D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g34560D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g20220D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g20230D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g20240D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng02290D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC06g08160D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng26960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g22120D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY-6801]], volatile esters biosynthesis (during fruit ripening):<br /> ** '''7''' reactions found over '''7''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> {{#set: ec-number=ec-2.3.1.84}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=21}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/3.4.23.1-RXN 3.4.23.1-RXN 2020-10-09T11:08:19Z <p>Admin: Created page with &quot;Category:reaction == Reaction 3.4.23.1-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.23.1 ec-3.4.23.1] * direction: ** left-to-right * common-name: ** nil == Rea...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction 3.4.23.1-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.4.23.1 ec-3.4.23.1]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 2 [[PROTON]][c] '''+''' 2 [[Peptides-holder]][c]<br /> == Gene(s) associated with this reaction ==<br /> * Gene: [[BnaA01g21330D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g05470D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/Q7M319 Q7M319]<br /> ** [http://www.uniprot.org/uniprot/P04073 P04073]<br /> ** [http://www.uniprot.org/uniprot/P13636 P13636]<br /> ** [http://www.uniprot.org/uniprot/Q7LZP4 Q7LZP4]<br /> ** [http://www.uniprot.org/uniprot/Q7LZF2 Q7LZF2]<br /> ** [http://www.uniprot.org/uniprot/Q28158 Q28158]<br /> ** [http://www.uniprot.org/uniprot/Q28157 Q28157]<br /> ** [http://www.uniprot.org/uniprot/P00792 P00792]<br /> ** [http://www.uniprot.org/uniprot/Q9PRG9 Q9PRG9]<br /> ** [http://www.uniprot.org/uniprot/P00790 P00790]<br /> ** [http://www.uniprot.org/uniprot/P03954 P03954]<br /> ** [http://www.uniprot.org/uniprot/P11489 P11489]<br /> ** [http://www.uniprot.org/uniprot/P00791 P00791]<br /> ** [http://www.uniprot.org/uniprot/P27678 P27678]<br /> ** [http://www.uniprot.org/uniprot/P27677 P27677]<br /> {{#set: ec-number=ec-3.4.23.1}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=2}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/3.1.4.10-RXN 3.1.4.10-RXN 2020-10-09T11:08:19Z <p>Admin: Created page with &quot;Category:reaction == Reaction 3.1.4.10-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.6.1.13 ec-4.6.1.13] * direction: ** left-to-right * common-name: ** nil == Rea...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction 3.1.4.10-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/4.6.1.13 ec-4.6.1.13]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[L-1-phosphatidyl-inositols]][c] '''=&gt;''' 1 [[CPD-1121]][c] '''+''' 1 [[DIACYLGLYCEROL]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC03g60130D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g65690D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g65700D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng36510D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng15340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng15330D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g16950D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g10960D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> * METANETX-RXN : MNXR115299<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17093 17093]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R03364 R03364]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/P08954 P08954]<br /> ** [http://www.uniprot.org/uniprot/P14262 P14262]<br /> ** [http://www.uniprot.org/uniprot/Q59488 Q59488]<br /> {{#set: ec-number=ec-4.6.1.13}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=8}}<br /> {{#set: nb pathway associated=0}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/3.1.3.46-RXN 3.1.3.46-RXN 2020-10-09T11:08:19Z <p>Admin: Created page with &quot;Category:reaction == Reaction 3.1.3.46-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.46 ec-3.1.3.46] * direction: ** left-to-right * common-name: ** nil == Rea...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction 3.1.3.46-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/3.1.3.46 ec-3.1.3.46]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD-535]][c] '''+''' 1 [[WATER]][c] '''=&gt;''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[Pi]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC08g01990D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC02g36340D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng51320D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g24530D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA10g04550D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g22310D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC03g51430D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g04910D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g28830D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng15770D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC08g45130D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> * [[PWY66-423]], fructose 2,6-bisphosphate biosynthesis:<br /> ** '''2''' reactions found over '''2''' reactions in the full pathway<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * METANETX-RXN : MNXR99466<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17290 17290]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R00763 R00763]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/P26285 P26285]<br /> ** [http://www.uniprot.org/uniprot/P25114 P25114]<br /> ** [http://www.uniprot.org/uniprot/Q7M3I3 Q7M3I3]<br /> ** [http://www.uniprot.org/uniprot/P49872 P49872]<br /> ** [http://www.uniprot.org/uniprot/Q28830 Q28830]<br /> ** [http://www.uniprot.org/uniprot/Q91348 Q91348]<br /> ** [http://www.uniprot.org/uniprot/Q9JJH5 Q9JJH5]<br /> ** [http://www.uniprot.org/uniprot/Q16875 Q16875]<br /> ** [http://www.uniprot.org/uniprot/P07953 P07953]<br /> ** [http://www.uniprot.org/uniprot/P16118 P16118]<br /> ** [http://www.uniprot.org/uniprot/P32604 P32604]<br /> ** [http://www.uniprot.org/uniprot/P70265 P70265]<br /> ** [http://www.uniprot.org/uniprot/P70266 P70266]<br /> ** [http://www.uniprot.org/uniprot/O24559 O24559]<br /> ** [http://www.uniprot.org/uniprot/O81398 O81398]<br /> ** [http://www.uniprot.org/uniprot/O64983 O64983]<br /> ** [http://www.uniprot.org/uniprot/Q9URZ7 Q9URZ7]<br /> &lt;/div&gt;<br /> {{#set: ec-number=ec-3.1.3.46}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=11}}<br /> {{#set: nb pathway associated=1}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin https://bbip.genouest.org/sp/brassica_napus/aureme/index.php/GPPSYN-RXN GPPSYN-RXN 2020-10-09T11:08:19Z <p>Admin: Created page with &quot;Category:reaction == Reaction GPPSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.1 ec-2.5.1.1] * direction: ** left-to-right * common-name: ** nil == Reactio...&quot;</p> <hr /> <div>[[Category:reaction]]<br /> == Reaction GPPSYN-RXN ==<br /> * ec-number:<br /> ** [http://enzyme.expasy.org/EC/2.5.1.1 ec-2.5.1.1]<br /> * direction:<br /> ** left-to-right<br /> * common-name:<br /> ** nil<br /> == Reaction formula ==<br /> * 1 [[CPD-4211]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''=&gt;''' 1 [[GERANYL-PP]][c] '''+''' 1 [[PPI]][c]<br /> == Gene(s) associated with this reaction ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * Gene: [[BnaC09g51100D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g20500D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng74570D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g32750D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g33450D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng57390D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA03g35610D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g09680D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g18910D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g18970D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA09g41820D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC01g02050D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng67790D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaCnng66570D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g01020D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA06g35250D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA01g29350D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g01820D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA07g01750D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g31920D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA04g13910D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng37200D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA08g15440D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaAnng18270D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC04g37010D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA02g25720D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC05g39040D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaC07g03180D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> * Gene: [[BnaA05g24980D]]<br /> ** Category: [[annotation]]<br /> *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a<br /> &lt;/div&gt;<br /> == Pathway(s) ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * [[PWY-7141]], (3S)-linalool biosynthesis:<br /> ** '''2''' reactions found over '''2''' reactions in the full pathway<br /> * [[PWY-7709]], (3R)-linalool biosynthesis:<br /> ** '''1''' reactions found over '''2''' reactions in the full pathway<br /> * [[PWY-7102]], bisabolene biosynthesis (engineered):<br /> ** '''3''' reactions found over '''6''' reactions in the full pathway<br /> * [[PWY-5122]], geranyl diphosphate biosynthesis:<br /> ** '''1''' reactions found over '''1''' reactions in the full pathway<br /> * [[PWY-6383]], mono-trans, poly-cis decaprenyl phosphate biosynthesis:<br /> ** '''2''' reactions found over '''5''' reactions in the full pathway<br /> * [[PWY-7659]], viridicatumtoxin biosynthesis:<br /> ** '''1''' reactions found over '''9''' reactions in the full pathway<br /> * [[PWY-5123]], trans, trans-farnesyl diphosphate biosynthesis:<br /> ** '''3''' reactions found over '''3''' reactions in the full pathway<br /> * [[PWY-7410]], ipsdienol biosynthesis:<br /> ** '''2''' reactions found over '''4''' reactions in the full pathway<br /> * [[PWY-6859]], all-trans-farnesol biosynthesis:<br /> ** '''3''' reactions found over '''4''' reactions in the full pathway<br /> * [[PWY-7182]], linalool biosynthesis I:<br /> ** '''1''' reactions found over '''2''' reactions in the full pathway<br /> * [[PWY-7736]], stellatic acid biosynthesis:<br /> ** '''4''' reactions found over '''8''' reactions in the full pathway<br /> &lt;/div&gt;<br /> == Reconstruction information ==<br /> * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a<br /> == External links ==<br /> &lt;div class=&quot;toccolours mw-collapsible mw-collapsed&quot; style=&quot;width:100%; overflow:auto;&quot;&gt;<br /> * METANETX-RXN : MNXR97512<br /> * RHEA:<br /> ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22408 22408]<br /> * LIGAND-RXN:<br /> ** [http://www.genome.jp/dbget-bin/www_bget?R01658 R01658]<br /> * UNIPROT:<br /> ** [http://www.uniprot.org/uniprot/P08524 P08524]<br /> ** [http://www.uniprot.org/uniprot/P05369 P05369]<br /> ** [http://www.uniprot.org/uniprot/P14324 P14324]<br /> ** [http://www.uniprot.org/uniprot/P46376 P46376]<br /> ** [http://www.uniprot.org/uniprot/Q45220 Q45220]<br /> ** [http://www.uniprot.org/uniprot/P49350 P49350]<br /> ** [http://www.uniprot.org/uniprot/Q50891 Q50891]<br /> ** [http://www.uniprot.org/uniprot/P49349 P49349]<br /> ** [http://www.uniprot.org/uniprot/Q09152 Q09152]<br /> ** [http://www.uniprot.org/uniprot/P49351 P49351]<br /> ** [http://www.uniprot.org/uniprot/P49352 P49352]<br /> ** [http://www.uniprot.org/uniprot/Q43315 Q43315]<br /> ** [http://www.uniprot.org/uniprot/O24241 O24241]<br /> ** [http://www.uniprot.org/uniprot/O24242 O24242]<br /> ** [http://www.uniprot.org/uniprot/Q92334 Q92334]<br /> ** [http://www.uniprot.org/uniprot/Q92218 Q92218]<br /> ** [http://www.uniprot.org/uniprot/Q92235 Q92235]<br /> ** [http://www.uniprot.org/uniprot/Q92250 Q92250]<br /> ** [http://www.uniprot.org/uniprot/Q8L7F4 Q8L7F4]<br /> ** [http://www.uniprot.org/uniprot/P49353 P49353]<br /> ** [http://www.uniprot.org/uniprot/O04882 O04882]<br /> ** [http://www.uniprot.org/uniprot/O65004 O65004]<br /> &lt;/div&gt;<br /> {{#set: ec-number=ec-2.5.1.1}}<br /> {{#set: direction=left-to-right}}<br /> {{#set: common-name=nil}}<br /> {{#set: nb gene associated=29}}<br /> {{#set: nb pathway associated=11}}<br /> {{#set: reconstruction category=annotation}}<br /> {{#set: reconstruction tool=pathwaytools}}<br /> {{#set: reconstruction comment=n.a}}<br /> {{#set: reconstruction source=genome}}</div> Admin